BLASTX nr result

ID: Coptis24_contig00006177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006177
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC32109.1| ABC transporter family protein [Camellia sinensis]     412   e-113
ref|XP_002276857.1| PREDICTED: ABC transporter I family member 1...   410   e-112
gb|AEO32926.1| hypothetical protein [Amblyomma maculatum]             401   e-109
ref|XP_002454753.1| hypothetical protein SORBIDRAFT_04g036680 [S...   399   e-109
ref|XP_002306861.1| ABC transporter family protein [Populus tric...   399   e-109

>gb|AEC32109.1| ABC transporter family protein [Camellia sinensis]
          Length = 287

 Score =  412 bits (1059), Expect = e-113
 Identities = 203/252 (80%), Positives = 219/252 (86%)
 Frame = +1

Query: 70  MGKANNQSIQVSGLQFSYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHM 249
           M + N  SI+VSG+QF YD Q P+F DF L I PGSRCLLVGANGSGKTTLLKILAGKHM
Sbjct: 1   MEEKNWSSIEVSGMQFGYDGQSPVFIDFTLKILPGSRCLLVGANGSGKTTLLKILAGKHM 60

Query: 250 VGGRDVVRVLDCSAFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEG 429
           VGGRDVVRVL+CSAFHDT LVCSGDL+YLGGSWSKTVGSAG+IPLQGDFSA HMIFGVEG
Sbjct: 61  VGGRDVVRVLNCSAFHDTHLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEG 120

Query: 430 IDPVRRENLIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXXARM 609
           +DPVRRE LIELLDIDL+WRMHKVSDGQRRRVQICMGLLHPFQ              AR+
Sbjct: 121 VDPVRREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARL 180

Query: 610 DLLEFFKEECEQRGATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNL 789
           DLL+FFKEECEQRGATIVYATHIFDGLETWATD+AYI  GEL+R+ KL EL ELKN++NL
Sbjct: 181 DLLDFFKEECEQRGATIVYATHIFDGLETWATDLAYIHAGELKRTDKLSELGELKNSANL 240

Query: 790 LSVVESWLRSET 825
           LSVVESWLRSET
Sbjct: 241 LSVVESWLRSET 252


>ref|XP_002276857.1| PREDICTED: ABC transporter I family member 19 [Vitis vinifera]
           gi|297744168|emb|CBI37138.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  410 bits (1054), Expect = e-112
 Identities = 195/250 (78%), Positives = 224/250 (89%)
 Frame = +1

Query: 79  ANNQSIQVSGLQFSYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHMVGG 258
           +++ SI+V+GLQF+Y+ QPP+F DFNL ISPGSRCLLVGANGSGKTTLL+ILAGKHMVGG
Sbjct: 7   SSSNSIKVNGLQFAYEGQPPLFLDFNLQISPGSRCLLVGANGSGKTTLLRILAGKHMVGG 66

Query: 259 RDVVRVLDCSAFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEGIDP 438
           RDVV+VL+CSAFHDT LVCSGDL+YLGGSWSK +GSAG++PLQGDFSA HMIFGVEGI+P
Sbjct: 67  RDVVQVLNCSAFHDTHLVCSGDLSYLGGSWSKNIGSAGEVPLQGDFSAEHMIFGVEGINP 126

Query: 439 VRRENLIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXXARMDLL 618
           VRR+ L++LLDIDL+WRMHKVSDGQRRRVQICMGLLHPFQ              ARMDLL
Sbjct: 127 VRRDKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARMDLL 186

Query: 619 EFFKEECEQRGATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNLLSV 798
           EFFKEEC+QRGATIVYATHIFDGLETWATD+AY+Q+G+LR+ +KL EL ELK ++NLLSV
Sbjct: 187 EFFKEECDQRGATIVYATHIFDGLETWATDLAYVQEGDLRKIEKLSELDELKTSANLLSV 246

Query: 799 VESWLRSETK 828
           VESWLRSETK
Sbjct: 247 VESWLRSETK 256


>gb|AEO32926.1| hypothetical protein [Amblyomma maculatum]
          Length = 312

 Score =  401 bits (1030), Expect = e-109
 Identities = 193/245 (78%), Positives = 215/245 (87%)
 Frame = +1

Query: 94  IQVSGLQFSYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVR 273
           I+V+GLQF+YD QPP+FA FN+DI PGSRCLL+GANGSGKTTLLKILAGKH+VGGRDVVR
Sbjct: 34  IEVAGLQFAYDGQPPLFARFNIDIIPGSRCLLIGANGSGKTTLLKILAGKHLVGGRDVVR 93

Query: 274 VLDCSAFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEGIDPVRREN 453
           VL  SAFHDT LVCSGDL YLGGSWSKTVGSAGD+PLQGDFS+ HMIFGVEG+DP+RRE 
Sbjct: 94  VLGSSAFHDTNLVCSGDLVYLGGSWSKTVGSAGDVPLQGDFSSEHMIFGVEGVDPLRREK 153

Query: 454 LIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXXARMDLLEFFKE 633
           LI+LLDIDL+WRMHKVSDGQRRRVQICMGLLHP++               RMDLLEFFKE
Sbjct: 154 LIDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKALLLDEITVDLDVVTRMDLLEFFKE 213

Query: 634 ECEQRGATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNLLSVVESWL 813
           ECEQRGATIVYATHIFDGLETWAT VAYIQ+GELRR  K+ ++ ELK+A+NLLSVVESWL
Sbjct: 214 ECEQRGATIVYATHIFDGLETWATHVAYIQEGELRRCGKMADIHELKSANNLLSVVESWL 273

Query: 814 RSETK 828
            SE+K
Sbjct: 274 HSESK 278


>ref|XP_002454753.1| hypothetical protein SORBIDRAFT_04g036680 [Sorghum bicolor]
           gi|241934584|gb|EES07729.1| hypothetical protein
           SORBIDRAFT_04g036680 [Sorghum bicolor]
          Length = 295

 Score =  399 bits (1026), Expect = e-109
 Identities = 192/245 (78%), Positives = 215/245 (87%)
 Frame = +1

Query: 94  IQVSGLQFSYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVR 273
           I+VS LQF YD QPP+FA FNL ++PGSRCLL+GANGSGKTTLLKILAGKHMVGGRDVVR
Sbjct: 17  IEVSALQFGYDGQPPLFARFNLRVAPGSRCLLIGANGSGKTTLLKILAGKHMVGGRDVVR 76

Query: 274 VLDCSAFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEGIDPVRREN 453
           VL+ SAFHDTQLVCSGDL+YLGGSWS+T+GSAGD+PLQGDFSA HMIFGV+G+DPVRRE 
Sbjct: 77  VLNGSAFHDTQLVCSGDLSYLGGSWSRTIGSAGDVPLQGDFSAEHMIFGVDGVDPVRREK 136

Query: 454 LIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXXARMDLLEFFKE 633
           L++LLDIDL+WRMHKVSDGQRRRVQICMGLLHP++               RMDLL+FFKE
Sbjct: 137 LVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRMDLLDFFKE 196

Query: 634 ECEQRGATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNLLSVVESWL 813
           ECEQR ATIVYATHIFDGLETWATD AYIQ+GELRRS +  ++ ELK+A NLLSVVESWL
Sbjct: 197 ECEQREATIVYATHIFDGLETWATDFAYIQEGELRRSGRYSDIEELKSAKNLLSVVESWL 256

Query: 814 RSETK 828
           RSETK
Sbjct: 257 RSETK 261


>ref|XP_002306861.1| ABC transporter family protein [Populus trichocarpa]
           gi|222856310|gb|EEE93857.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 274

 Score =  399 bits (1024), Expect = e-109
 Identities = 196/240 (81%), Positives = 213/240 (88%)
 Frame = +1

Query: 109 LQFSYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLDCS 288
           +QF+Y  Q P+F +FNL+ISPGSRCLLVGANGSGKTTLLKI+AGKHMVGGRDVVRV++ S
Sbjct: 1   MQFAYPGQHPLFYEFNLNISPGSRCLLVGANGSGKTTLLKIMAGKHMVGGRDVVRVINGS 60

Query: 289 AFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEGIDPVRRENLIELL 468
           AFHDTQLVCSGDLAYLGGSWSKTVGSAG+IPLQGDFSA HMIFGVEG DPVRRE LIELL
Sbjct: 61  AFHDTQLVCSGDLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGTDPVRREKLIELL 120

Query: 469 DIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXXARMDLLEFFKEECEQR 648
           DIDLKWRMHKVSDGQRRRVQICMGLLHPF+              ARMDLLEFFKEEC+QR
Sbjct: 121 DIDLKWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECDQR 180

Query: 649 GATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNLLSVVESWLRSETK 828
           GATIVYATHIFDGLETWAT +AYIQDGEL+R +KL E+ ELKN++ LLSVVESWLRSETK
Sbjct: 181 GATIVYATHIFDGLETWATHLAYIQDGELKRVKKLTEVHELKNSATLLSVVESWLRSETK 240


Top