BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006169
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513581.1| ATP-dependent peptidase, putative [Ricinus c...    92   6e-17
ref|XP_002268307.2| PREDICTED: ATP-dependent zinc metalloproteas...    86   4e-15
emb|CBI22535.3| unnamed protein product [Vitis vinifera]               86   4e-15
emb|CAN66870.1| hypothetical protein VITISV_013674 [Vitis vinifera]    85   5e-15
ref|NP_568787.1| cell division protease ftsH-11 [Arabidopsis tha...    84   1e-14

>ref|XP_002513581.1| ATP-dependent peptidase, putative [Ricinus communis]
           gi|223547489|gb|EEF48984.1| ATP-dependent peptidase,
           putative [Ricinus communis]
          Length = 821

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/71 (60%), Positives = 54/71 (76%)
 Frame = +3

Query: 99  GNVNKFPVLVFLMGVLATARSGLEKVEWPKWMNWWQFWQQEKRLEKLIAEADASPNNAAV 278
           G + K P +VFLMG+L TA+ GLEK     W++W  FW QEKRL++LIAEADA+P +A  
Sbjct: 146 GVMGKLPFVVFLMGLLVTAKKGLEKFLSSDWLSWMPFWHQEKRLDRLIAEADANPKDANK 205

Query: 279 QSALLSELNKH 311
           Q+ALLSELNKH
Sbjct: 206 QAALLSELNKH 216


>ref|XP_002268307.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 11,
           chloroplastic/mitochondrial-like [Vitis vinifera]
          Length = 804

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/73 (53%), Positives = 51/73 (69%)
 Frame = +3

Query: 93  DSGNVNKFPVLVFLMGVLATARSGLEKVEWPKWMNWWQFWQQEKRLEKLIAEADASPNNA 272
           + G  ++  V+VF MGV    R+  EKV   +W +WW FW+QEKRLE+LI+EADA+P + 
Sbjct: 43  NEGTKSRLAVVVFAMGVWGAVRTWFEKVLGSEWFSWWPFWRQEKRLERLISEADANPKDV 102

Query: 273 AVQSALLSELNKH 311
             QSALL ELNKH
Sbjct: 103 EKQSALLVELNKH 115


>emb|CBI22535.3| unnamed protein product [Vitis vinifera]
          Length = 1311

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/73 (53%), Positives = 51/73 (69%)
 Frame = +3

Query: 93  DSGNVNKFPVLVFLMGVLATARSGLEKVEWPKWMNWWQFWQQEKRLEKLIAEADASPNNA 272
           + G  ++  V+VF MGV    R+  EKV   +W +WW FW+QEKRLE+LI+EADA+P + 
Sbjct: 633 NEGTKSRLAVVVFAMGVWGAVRTWFEKVLGSEWFSWWPFWRQEKRLERLISEADANPKDV 692

Query: 273 AVQSALLSELNKH 311
             QSALL ELNKH
Sbjct: 693 EKQSALLVELNKH 705


>emb|CAN66870.1| hypothetical protein VITISV_013674 [Vitis vinifera]
          Length = 869

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/73 (53%), Positives = 51/73 (69%)
 Frame = +3

Query: 93  DSGNVNKFPVLVFLMGVLATARSGLEKVEWPKWMNWWQFWQQEKRLEKLIAEADASPNNA 272
           + G  ++  V+VF MGV    R+  EKV   +W +WW FW+QEKRLE+LI+EADA+P + 
Sbjct: 113 NEGXKSRLAVVVFAMGVWGAVRTWFEKVLGSEWFSWWPFWRQEKRLERLISEADANPKDV 172

Query: 273 AVQSALLSELNKH 311
             QSALL ELNKH
Sbjct: 173 EKQSALLVELNKH 185


>ref|NP_568787.1| cell division protease ftsH-11 [Arabidopsis thaliana]
           gi|75333814|sp|Q9FGM0.1|FTSHB_ARATH RecName:
           Full=ATP-dependent zinc metalloprotease FTSH 11,
           chloroplastic/mitochondrial; Short=AtFTSH11; Flags:
           Precursor gi|9757998|dbj|BAB08420.1| cell division
           protein FtsH protease-like [Arabidopsis thaliana]
           gi|20258848|gb|AAM13906.1| putative FtsH protease
           [Arabidopsis thaliana] gi|21689833|gb|AAM67560.1|
           putative FtsH protease [Arabidopsis thaliana]
           gi|332008934|gb|AED96317.1| cell division protease
           ftsH-11 [Arabidopsis thaliana]
          Length = 806

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/76 (53%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
 Frame = +3

Query: 87  KVDSGNVNKFPVLVFLMGVLATARSGLEKV-EWPKWMNWWQFWQQEKRLEKLIAEADASP 263
           K +    +KF ++V +M + A  +  +EKV EW +W++WW F +QEKRLEKLIAEADA+P
Sbjct: 129 KEEDQKKSKFRIVVLMMALWAAIKRAIEKVMEW-EWLSWWPFSRQEKRLEKLIAEADANP 187

Query: 264 NNAAVQSALLSELNKH 311
            +AA+Q ALL+ELNKH
Sbjct: 188 KDAALQGALLAELNKH 203