BLASTX nr result

ID: Coptis24_contig00006152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006152
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncat...   137   7e-31
ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [...   134   6e-30
emb|CBI27785.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [...   130   1e-28
ref|XP_004141180.1| PREDICTED: transmembrane protein 184C-like [...   129   2e-28

>ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncatula]
           gi|355484377|gb|AES65580.1| Transmembrane protein 184C
           [Medicago truncatula]
          Length = 439

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/73 (86%), Positives = 66/73 (90%)
 Frame = -2

Query: 220 NFSQIWALLCLVQFYHVTHQRLQPIKPLAKFISFKAIVFVTWWQGVGIALLCAIHVLPNE 41
           NFSQIWAL CLVQFY+VTH+RLQPIKPLAKFISFKAIVF TWWQGVGIALLC   VLPN+
Sbjct: 221 NFSQIWALYCLVQFYNVTHERLQPIKPLAKFISFKAIVFATWWQGVGIALLCTFRVLPND 280

Query: 40  GKFQIGLQDFLIC 2
           GK Q GLQDFLIC
Sbjct: 281 GKLQTGLQDFLIC 293


>ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 396

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/72 (86%), Positives = 66/72 (91%)
 Frame = -2

Query: 220 NFSQIWALLCLVQFYHVTHQRLQPIKPLAKFISFKAIVFVTWWQGVGIALLCAIHVLPNE 41
           NFSQ+WAL CLVQFY+VTH+RLQPIKPLAKFISFKAIVF TWWQGVGIA+LC   VLPNE
Sbjct: 206 NFSQMWALYCLVQFYNVTHERLQPIKPLAKFISFKAIVFATWWQGVGIAVLCTFGVLPNE 265

Query: 40  GKFQIGLQDFLI 5
           GKFQ GLQDFLI
Sbjct: 266 GKFQTGLQDFLI 277


>emb|CBI27785.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/73 (82%), Positives = 65/73 (89%)
 Frame = -2

Query: 220 NFSQIWALLCLVQFYHVTHQRLQPIKPLAKFISFKAIVFVTWWQGVGIALLCAIHVLPNE 41
           NFSQ+WAL CLVQFY+VTH RLQ IKPLAKFISFKAIVF TWWQGVGIALLC++ V P +
Sbjct: 235 NFSQMWALFCLVQFYNVTHGRLQSIKPLAKFISFKAIVFATWWQGVGIALLCSLGVWPKQ 294

Query: 40  GKFQIGLQDFLIC 2
           GKFQ GLQDFLIC
Sbjct: 295 GKFQTGLQDFLIC 307


>ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 432

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/73 (82%), Positives = 65/73 (89%)
 Frame = -2

Query: 220 NFSQIWALLCLVQFYHVTHQRLQPIKPLAKFISFKAIVFVTWWQGVGIALLCAIHVLPNE 41
           NFSQ+WAL CLVQFY+VTH RLQ IKPLAKFISFKAIVF TWWQGVGIALLC++ V P +
Sbjct: 210 NFSQMWALFCLVQFYNVTHGRLQSIKPLAKFISFKAIVFATWWQGVGIALLCSLGVWPKQ 269

Query: 40  GKFQIGLQDFLIC 2
           GKFQ GLQDFLIC
Sbjct: 270 GKFQTGLQDFLIC 282


>ref|XP_004141180.1| PREDICTED: transmembrane protein 184C-like [Cucumis sativus]
           gi|449488211|ref|XP_004157969.1| PREDICTED:
           transmembrane protein 184C-like [Cucumis sativus]
          Length = 418

 Score =  129 bits (324), Expect = 2e-28
 Identities = 59/73 (80%), Positives = 66/73 (90%)
 Frame = -2

Query: 220 NFSQIWALLCLVQFYHVTHQRLQPIKPLAKFISFKAIVFVTWWQGVGIALLCAIHVLPNE 41
           NFSQ+WAL CLVQFY+VTH++L+PIKPLAKFISFKAIVF TWWQGVGIALL  + VLP E
Sbjct: 207 NFSQMWALFCLVQFYNVTHEQLKPIKPLAKFISFKAIVFATWWQGVGIALLRELEVLPKE 266

Query: 40  GKFQIGLQDFLIC 2
           GK +IGLQDFLIC
Sbjct: 267 GKLEIGLQDFLIC 279


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