BLASTX nr result

ID: Coptis24_contig00006129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006129
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_247580.1| maturase K [Cucumis sativus] gi|67511379|emb|CA...    72   6e-11
gb|AEH26578.1| maturase [Veronica persica]                             65   4e-09
sp|Q9TIQ4.1|MATK_VERAR RecName: Full=Maturase K; AltName: Full=I...    64   1e-08
emb|CCF70770.1| maturase K (chloroplast) [Xanthorhiza simpliciss...    64   2e-08
gb|AEO71990.1| maturase K [Cleome africana]                            64   2e-08

>ref|YP_247580.1| maturase K [Cucumis sativus] gi|67511379|emb|CAJ00739.1| maturase
           [Cucumis sativus]
          Length = 512

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/56 (64%), Positives = 41/56 (73%)
 Frame = +3

Query: 84  PSKFHQILILSTDLFIYVEIFLIITADLQKKRVCIE*SIYLDFRVLELWLVNTKVL 251
           P    +ILIL  D  +Y EIFLIIT D QKKR+CIE +IY  F VL+LWLVNTKVL
Sbjct: 391 PGSIRRILILLIDFCVYPEIFLIITEDPQKKRICIEYNIYFAFLVLKLWLVNTKVL 446


>gb|AEH26578.1| maturase [Veronica persica]
          Length = 513

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/48 (68%), Positives = 34/48 (70%)
 Frame = +2

Query: 119 RFVHICRNLXXXXXXXXXXXXXXRIKYILRLSCARTLARKHKSTVRSF 262
           RFVHICRNL              RIKYILRLSCARTLARKHKSTVR+F
Sbjct: 412 RFVHICRNLSHYYSGSSKKKSLYRIKYILRLSCARTLARKHKSTVRAF 459


>sp|Q9TIQ4.1|MATK_VERAR RecName: Full=Maturase K; AltName: Full=Intron maturase
           gi|6650079|gb|AAF21708.1|AF052003_1 maturase K [Veronica
           arvensis]
          Length = 517

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/48 (68%), Positives = 33/48 (68%)
 Frame = +2

Query: 119 RFVHICRNLXXXXXXXXXXXXXXRIKYILRLSCARTLARKHKSTVRSF 262
           RFVHICRNL              RIKYILRLSCARTLARKHKSTVR F
Sbjct: 416 RFVHICRNLSHYYSGSSKKKSLYRIKYILRLSCARTLARKHKSTVRVF 463


>emb|CCF70770.1| maturase K (chloroplast) [Xanthorhiza simplicissima]
           gi|441478418|emb|CCF70772.1| maturase K gene
           [Xanthorhiza simplicissima]
          Length = 508

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/48 (68%), Positives = 33/48 (68%)
 Frame = +2

Query: 119 RFVHICRNLXXXXXXXXXXXXXXRIKYILRLSCARTLARKHKSTVRSF 262
           RFV ICRNL              RIKYILRLSCARTLARKHKSTVRSF
Sbjct: 407 RFVRICRNLSHYYSGSSKKKSLYRIKYILRLSCARTLARKHKSTVRSF 454


>gb|AEO71990.1| maturase K [Cleome africana]
          Length = 507

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/48 (66%), Positives = 33/48 (68%)
 Frame = +2

Query: 119 RFVHICRNLXXXXXXXXXXXXXXRIKYILRLSCARTLARKHKSTVRSF 262
           RFVHICRNL              RIKYILRLSC RTLARKHKSTVR+F
Sbjct: 406 RFVHICRNLSHYHSGSSKKKNLYRIKYILRLSCLRTLARKHKSTVRAF 453


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