BLASTX nr result

ID: Coptis24_contig00006119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006119
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632020.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   317   2e-84
ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   311   1e-82
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   309   7e-82
emb|CBI23588.3| unnamed protein product [Vitis vinifera]              308   1e-81
ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   308   1e-81

>ref|XP_003632020.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis
            vinifera]
          Length = 680

 Score =  317 bits (813), Expect = 2e-84
 Identities = 150/279 (53%), Positives = 201/279 (72%), Gaps = 1/279 (0%)
 Frame = -2

Query: 911  EKWGFFLVVNHGVPSSVMEGMIKGVAKFHDLNNEVKKEWYSRDTKVRVRFYSNFDLYTSK 732
            E+WGFF VVNHG+PS+V+E M+ G+  F++ + EVKKE+YSRD   +V+F SN+DL+ S+
Sbjct: 403  EEWGFFQVVNHGIPSNVLEEMVNGIRVFNEQDPEVKKEYYSRDMMRKVKFNSNYDLFHSR 462

Query: 731  AASWRDTLTFLMSTPEPINPEEMPTICRDTTIEYTKHVTXXXXXXXXXXXXXXXLKANFL 552
            AA+WRDTLT  + T + ++P+E+P ICR+ T EY KHV                LK + L
Sbjct: 463  AANWRDTLTISL-TSDGLDPQELPAICREATTEYIKHVMKLGDVLFELLSEALGLKPDHL 521

Query: 551  KQMEGAEACS-LICNYYPACPEPELTIGAARHTDPIVLSILLQDNIGGLQVLHQGQWVDI 375
            + M   E  S ++C+YYPACPEPELT+G ++HTDP  L+ILLQD IGGLQV H+ QW ++
Sbjct: 522  RAMGYTEGSSTMVCHYYPACPEPELTMGTSKHTDPATLTILLQDQIGGLQVFHENQWAEV 581

Query: 374  HPIPGALVVNIGDLLQIVSNDKLKSVEHRALSNHIGPRVSVACFLSLRFDVATRPCGPIK 195
            HPI G+LV+NIGD LQ++SN KLKSV HR ++NH+GPR+S A F S       + CGP+K
Sbjct: 582  HPIAGSLVINIGDFLQVMSNGKLKSVYHRVVANHVGPRISTAYFFSGARTEPAKLCGPLK 641

Query: 194  DLISDENPPVYRDILMKEYMDHFAHQGLDGKPGLDFFKL 78
            +LIS+ENPPVYRD L+ EY+  F  +GLD   GLD+FKL
Sbjct: 642  ELISEENPPVYRDFLVAEYIGKFMSKGLDDDSGLDYFKL 680



 Score =  290 bits (742), Expect = 3e-76
 Identities = 141/281 (50%), Positives = 189/281 (67%), Gaps = 3/281 (1%)
 Frame = -2

Query: 911 EKWGFFLVVNHGVPSSVMEGMIKGVAKFHDLNNEVKKEWYSRDTKVRVRFYSNFDLYTSK 732
           +KWGFFLV+NH +P SV+  MI G+ +FH+ + E KKEWY+RD   +V + SNFDLY + 
Sbjct: 93  KKWGFFLVINHEIPESVLSEMIDGIRRFHEQDGEAKKEWYTRDYSRKVTYSSNFDLYQAS 152

Query: 731 AASWRDTLTFLMSTPEPINPEEMPTICRDTTIEYTKHVTXXXXXXXXXXXXXXXLKANFL 552
           + +WRDT    ++ P+P  PE++P +CRD  +EY KHV                L  N L
Sbjct: 153 STNWRDTFACTLA-PDPPQPEQLPAVCRDILMEYLKHVRRLGFSLFELLSEALGLHPNHL 211

Query: 551 KQMEGAEACSLICNYYPACPEPELTIGAARHTDPIVLSILLQDNIGGLQVLHQGQWVDIH 372
           K ME AE   L+ +YYPACPEPELT+G + HTD   ++IL+QD +GGLQVLH+ QWV+I 
Sbjct: 212 KNMECAEGILLLGHYYPACPEPELTLGTSSHTDADFITILIQDQMGGLQVLHEDQWVNIP 271

Query: 371 PIPGALVVNIGDLLQIVSNDKLKSVEHRALSNHIGPRVSVACFLS--LRFDVATRPCGPI 198
           PI GALV+N+GDLLQ VSN   KS EHR L+ ++GPR+SVACF    +  +  TR  GPI
Sbjct: 272 PISGALVINVGDLLQFVSNGNFKSSEHRVLAKNVGPRISVACFFRKIIPVENTTRLYGPI 331

Query: 197 KDLISDENPPVYR-DILMKEYMDHFAHQGLDGKPGLDFFKL 78
           K+L+S++NPP+YR +    EY+ H+  +GLDG   L  FKL
Sbjct: 332 KELLSEDNPPIYRQENFPNEYLMHYDSKGLDGTSSLLRFKL 372


>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 363

 Score =  311 bits (797), Expect = 1e-82
 Identities = 150/278 (53%), Positives = 197/278 (70%)
 Frame = -2

Query: 911 EKWGFFLVVNHGVPSSVMEGMIKGVAKFHDLNNEVKKEWYSRDTKVRVRFYSNFDLYTSK 732
           E WG F VVNHG+P SV+E M+ GV +F++ +NEVKKE+Y+RD   +V + SNFDLY SK
Sbjct: 87  ETWGLFTVVNHGIPVSVLEEMMDGVHRFYEQDNEVKKEFYTRDLTRKVIYNSNFDLYVSK 146

Query: 731 AASWRDTLTFLMSTPEPINPEEMPTICRDTTIEYTKHVTXXXXXXXXXXXXXXXLKANFL 552
           AA+WRDT   LM+ P P+NP+E+P  CRD  +EY + V                L  N L
Sbjct: 147 AANWRDTFYCLMA-PHPLNPQELPATCRDILMEYKEQVMRLGLKLLELMSEAIGLNPNHL 205

Query: 551 KQMEGAEACSLICNYYPACPEPELTIGAARHTDPIVLSILLQDNIGGLQVLHQGQWVDIH 372
           K M+ AE  +++C+YYPACP+PELT+G  +H+D   L+ILLQD IGGLQVLHQ QWVD+ 
Sbjct: 206 KDMDCAEGLAILCHYYPACPQPELTMGTTKHSDNDFLTILLQDQIGGLQVLHQDQWVDVP 265

Query: 371 PIPGALVVNIGDLLQIVSNDKLKSVEHRALSNHIGPRVSVACFLSLRFDVATRPCGPIKD 192
           P PGALV+N+GDLLQ+++ND+ KSVEHR L+N  GPRVSVACF S     +++  GPIK+
Sbjct: 266 PEPGALVINVGDLLQLITNDRFKSVEHRVLANRRGPRVSVACFFSTSHLPSSKLYGPIKE 325

Query: 191 LISDENPPVYRDILMKEYMDHFAHQGLDGKPGLDFFKL 78
           L+S ENPP YR+  +++Y+ HF  +GLDG   L  FKL
Sbjct: 326 LLSKENPPKYRETTVRDYVLHFRSKGLDGTSALPQFKL 363


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  309 bits (791), Expect = 7e-82
 Identities = 145/279 (51%), Positives = 197/279 (70%), Gaps = 1/279 (0%)
 Frame = -2

Query: 911 EKWGFFLVVNHGVPSSVMEGMIKGVAKFHDLNNEVKKEWYSRDTKVRVRFY-SNFDLYTS 735
           E WGFF VVNHG+P SV+E M++GV +F++ + EVKK++Y+RD   +   Y SNFDLYT+
Sbjct: 88  ETWGFFNVVNHGIPVSVLEEMMEGVLRFYEQDTEVKKQFYTRDASRKKMVYNSNFDLYTA 147

Query: 734 KAASWRDTLTFLMSTPEPINPEEMPTICRDTTIEYTKHVTXXXXXXXXXXXXXXXLKANF 555
            AA+WRDT   LM+ P P NPEE+P  CRD  +EY   +                L  N 
Sbjct: 148 PAANWRDTFYCLMA-PHPPNPEELPAACRDILMEYKDQIMRLGFKLFELISEALGLNPNH 206

Query: 554 LKQMEGAEACSLICNYYPACPEPELTIGAARHTDPIVLSILLQDNIGGLQVLHQGQWVDI 375
           LK M+  E  S++C+YYP+CP+PELT+G  +H D   L++LLQD IGGLQVLHQGQW+D+
Sbjct: 207 LKDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQIGGLQVLHQGQWIDV 266

Query: 374 HPIPGALVVNIGDLLQIVSNDKLKSVEHRALSNHIGPRVSVACFLSLRFDVATRPCGPIK 195
            P+PGALV+N+GDLLQ+++ND+ KSVEHR L+NHIGPRVSVACF S     +++  GPIK
Sbjct: 267 PPMPGALVINVGDLLQLITNDRFKSVEHRVLANHIGPRVSVACFFSTSIQPSSKLYGPIK 326

Query: 194 DLISDENPPVYRDILMKEYMDHFAHQGLDGKPGLDFFKL 78
           +L+S+ENPP Y++  + +Y+ +F  +GLDG   L  F+L
Sbjct: 327 ELLSEENPPKYKETTVGDYVAYFNSKGLDGTSALPHFRL 365


>emb|CBI23588.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  308 bits (788), Expect = 1e-81
 Identities = 142/278 (51%), Positives = 197/278 (70%)
 Frame = -2

Query: 911 EKWGFFLVVNHGVPSSVMEGMIKGVAKFHDLNNEVKKEWYSRDTKVRVRFYSNFDLYTSK 732
           E WGFF V+NHG+P +V+E M+ GV +F++ + E+K+E+Y+RD   ++ + SNFDLYT+K
Sbjct: 20  ETWGFFNVLNHGIPVTVLEEMMNGVRRFYEQDTELKQEFYTRDVSRKLVYNSNFDLYTAK 79

Query: 731 AASWRDTLTFLMSTPEPINPEEMPTICRDTTIEYTKHVTXXXXXXXXXXXXXXXLKANFL 552
           AASWRDT   LM+ P P NP+++P  CRD  +EY + V                L  N L
Sbjct: 80  AASWRDTFYCLMA-PHPPNPQDLPAACRDILMEYKEQVMKLGFKLLELMSEALGLNPNHL 138

Query: 551 KQMEGAEACSLICNYYPACPEPELTIGAARHTDPIVLSILLQDNIGGLQVLHQGQWVDIH 372
           K M+ AE  +++C+YYPACP+PELT+G   HTD   L++LLQD IGGLQVLHQ QWVD+ 
Sbjct: 139 KGMDCAEGLAMVCHYYPACPQPELTLGTGFHTDNDFLTVLLQDQIGGLQVLHQDQWVDVP 198

Query: 371 PIPGALVVNIGDLLQIVSNDKLKSVEHRALSNHIGPRVSVACFLSLRFDVATRPCGPIKD 192
           P+PGALV+N+GDLLQ+++ND+ KSVEHR L+NH GPRVS+ACF S     +++  GPIK+
Sbjct: 199 PMPGALVINVGDLLQLITNDRFKSVEHRVLANHTGPRVSIACFFSTSVQPSSKLYGPIKE 258

Query: 191 LISDENPPVYRDILMKEYMDHFAHQGLDGKPGLDFFKL 78
           L+S+ENP  YR+  + +Y+ HF  +GL+G   L  F+L
Sbjct: 259 LLSEENPARYRETTVSDYVAHFQEKGLEGSTALQLFRL 296


>ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 364

 Score =  308 bits (788), Expect = 1e-81
 Identities = 142/278 (51%), Positives = 197/278 (70%)
 Frame = -2

Query: 911 EKWGFFLVVNHGVPSSVMEGMIKGVAKFHDLNNEVKKEWYSRDTKVRVRFYSNFDLYTSK 732
           E WGFF V+NHG+P +V+E M+ GV +F++ + E+K+E+Y+RD   ++ + SNFDLYT+K
Sbjct: 88  ETWGFFNVLNHGIPVTVLEEMMNGVRRFYEQDTELKQEFYTRDVSRKLVYNSNFDLYTAK 147

Query: 731 AASWRDTLTFLMSTPEPINPEEMPTICRDTTIEYTKHVTXXXXXXXXXXXXXXXLKANFL 552
           AASWRDT   LM+ P P NP+++P  CRD  +EY + V                L  N L
Sbjct: 148 AASWRDTFYCLMA-PHPPNPQDLPAACRDILMEYKEQVMKLGFKLLELMSEALGLNPNHL 206

Query: 551 KQMEGAEACSLICNYYPACPEPELTIGAARHTDPIVLSILLQDNIGGLQVLHQGQWVDIH 372
           K M+ AE  +++C+YYPACP+PELT+G   HTD   L++LLQD IGGLQVLHQ QWVD+ 
Sbjct: 207 KGMDCAEGLAMVCHYYPACPQPELTLGTGFHTDNDFLTVLLQDQIGGLQVLHQDQWVDVP 266

Query: 371 PIPGALVVNIGDLLQIVSNDKLKSVEHRALSNHIGPRVSVACFLSLRFDVATRPCGPIKD 192
           P+PGALV+N+GDLLQ+++ND+ KSVEHR L+NH GPRVS+ACF S     +++  GPIK+
Sbjct: 267 PMPGALVINVGDLLQLITNDRFKSVEHRVLANHTGPRVSIACFFSTSVQPSSKLYGPIKE 326

Query: 191 LISDENPPVYRDILMKEYMDHFAHQGLDGKPGLDFFKL 78
           L+S+ENP  YR+  + +Y+ HF  +GL+G   L  F+L
Sbjct: 327 LLSEENPARYRETTVSDYVAHFQEKGLEGSTALQLFRL 364


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