BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006111
         (2507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   720   0.0  
ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2...   714   0.0  
emb|CBI27769.3| unnamed protein product [Vitis vinifera]              704   0.0  
ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   697   0.0  
ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putativ...   691   0.0  

>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
            vinifera]
          Length = 600

 Score =  720 bits (1858), Expect = 0.0
 Identities = 365/507 (71%), Positives = 419/507 (82%)
 Frame = +3

Query: 138  LVNAATGTGKTIAYLAPIIHHLHLYHPRIDRAAGTYALVLVPTRELCLQVHEILHKLLHR 317
            LVNAATGTGKTIAYLAP+I+HLH Y PRI+R+AGT+ALVLVPTRELC+QV+EIL KLLHR
Sbjct: 72   LVNAATGTGKTIAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLHR 131

Query: 318  FFWIVPGYVMGGESRSKEKSRLRKGISILVATPGRLLDHLKNTTSFVHANLRWIIFDEAD 497
            F WIVPGYVMGGE+RSKEK+RLRKGISILVATPGRLLDHLKNT+SF+H NLRWIIFDEAD
Sbjct: 132  FHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKNTSSFLHTNLRWIIFDEAD 191

Query: 498  RILELGYGKEIEEILGFLGSRKDGGVSEDNTFSKHSKPQRQNLLLSATLNEKVNHLAKMS 677
            RILELG+GKEIEEIL  LGSR +G    ++  +  S+ QRQNLLLSATLNEKVNHLA++S
Sbjct: 192  RILELGFGKEIEEILDLLGSRTNGPTIREDAVT--SEFQRQNLLLSATLNEKVNHLAQIS 249

Query: 678  LENPVMIGIDETKLSTELSKRSVKHLKSIGSNVDDELELLGKLPNCSEADYNLPTQLIQR 857
            LENPV IG+D  K+     K  ++H  S+  +VD++ E L K+ + S  DY LP QL+QR
Sbjct: 250  LENPVTIGLDGKKMQP---KPPLEHFGSVEFDVDEDSEKLHKIISPSNGDYKLPAQLVQR 306

Query: 858  YVKVPCGSRLVILLSILRNLNEMEASQKVVVFFSTCDAVDFHHSLFSEFEWQSDPKIELH 1037
            YVKVPCGSRLV+LLSIL++L E EASQK+VVFFSTCDAVDFH+SLFS F W ++   E  
Sbjct: 307  YVKVPCGSRLVVLLSILKHLFEREASQKIVVFFSTCDAVDFHYSLFSAFLWPANLHPETE 366

Query: 1038 QKKAFLKCKTFRLHGNMEQEGRRTTFQGFKTEKSAILLCTDVAARGLDFPNVTCIIQYDS 1217
             ++ FL+ KTF+LHGNM+ E RRTTFQ FK EKSA+LL TDVAARGLDFP V CIIQYDS
Sbjct: 367  DRQMFLRFKTFQLHGNMKHEDRRTTFQTFKKEKSALLLSTDVAARGLDFPKVRCIIQYDS 426

Query: 1218 PGEASEYVHRVGRTARIGGKGEALLFLQPVEVDYLQDLQKHGVSLKEYPLLKVIDSFPLS 1397
            PGEASEYVHRVGRTAR+G +G++LLFLQPVE+DYLQDL+KHGVSL EY LLKV+DSFPLS
Sbjct: 427  PGEASEYVHRVGRTARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYSLLKVLDSFPLS 486

Query: 1398 NQRHLIKKFISIEMHPWVLTXXXXXXXXXXXXXXXXXXAKDAFCSWIRAYTAHRGELKRI 1577
             Q+H IKKFIS+EMHPW L                   AKDAFCSW+RAYTAHRGELKRI
Sbjct: 487  GQKHHIKKFISLEMHPWSLYLQKALESFIFAEPKMKKLAKDAFCSWVRAYTAHRGELKRI 546

Query: 1578 FMVKKLHLGHVAKSFGLRDQPSLVGGS 1658
            F VKKLHLGHVAKSF L+DQPSLVG S
Sbjct: 547  FQVKKLHLGHVAKSFALKDQPSLVGKS 573


>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
            predicted protein [Populus trichocarpa]
          Length = 594

 Score =  714 bits (1842), Expect = 0.0
 Identities = 359/507 (70%), Positives = 409/507 (80%)
 Frame = +3

Query: 138  LVNAATGTGKTIAYLAPIIHHLHLYHPRIDRAAGTYALVLVPTRELCLQVHEILHKLLHR 317
            LVNAATGTGKT+AYLAPIIHHLH Y  RIDR  GT+ALVLVPTRELCLQV+EIL KLLHR
Sbjct: 63   LVNAATGTGKTVAYLAPIIHHLHSYPSRIDRENGTFALVLVPTRELCLQVYEILQKLLHR 122

Query: 318  FFWIVPGYVMGGESRSKEKSRLRKGISILVATPGRLLDHLKNTTSFVHANLRWIIFDEAD 497
            F WIVPGYVMGGE+RSKEK+RLRKGISILVATPGRLLDHLKNT SFVH NLRWIIFDEAD
Sbjct: 123  FHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKNTASFVHTNLRWIIFDEAD 182

Query: 498  RILELGYGKEIEEILGFLGSRKDGGVSEDNTFSKHSKPQRQNLLLSATLNEKVNHLAKMS 677
            RILELG+GKEIEEIL  LGSR+ G V   N  S  S  Q QNLLLSATLNEKVNHLAK+S
Sbjct: 183  RILELGFGKEIEEILDLLGSRQIGSVGNGNQVSSLSNFQGQNLLLSATLNEKVNHLAKIS 242

Query: 678  LENPVMIGIDETKLSTELSKRSVKHLKSIGSNVDDELELLGKLPNCSEADYNLPTQLIQR 857
            LENPVMIG+D+ K+  +   +SV H+++  S+ DD L    K+ N S  DY LP QL+QR
Sbjct: 243  LENPVMIGLDDKKIQPD---QSVDHIETAESDEDDGLGY-SKVKNSSTGDYKLPAQLVQR 298

Query: 858  YVKVPCGSRLVILLSILRNLNEMEASQKVVVFFSTCDAVDFHHSLFSEFEWQSDPKIELH 1037
            YVKVPCGSRL +LLSIL+NL E EAS K+VVFFSTCDAVDFH+SL SEF W  + + E  
Sbjct: 299  YVKVPCGSRLAVLLSILKNLFEREASHKIVVFFSTCDAVDFHYSLLSEFCWSPNSQSEAE 358

Query: 1038 QKKAFLKCKTFRLHGNMEQEGRRTTFQGFKTEKSAILLCTDVAARGLDFPNVTCIIQYDS 1217
              + FL+C T RLHGNM+QE RR TFQ FKTEKSA+LL TD+AARGLDFP V CI+QYDS
Sbjct: 359  HTERFLRCNTLRLHGNMKQEDRRNTFQAFKTEKSALLLSTDIAARGLDFPKVRCIVQYDS 418

Query: 1218 PGEASEYVHRVGRTARIGGKGEALLFLQPVEVDYLQDLQKHGVSLKEYPLLKVIDSFPLS 1397
            PGEA+EYVHRVGRTAR+G KG++LLFLQPVEVDYL DL+KHGVSL EYP+LKV+ SFPL 
Sbjct: 419  PGEATEYVHRVGRTARLGEKGDSLLFLQPVEVDYLHDLEKHGVSLTEYPILKVLGSFPLY 478

Query: 1398 NQRHLIKKFISIEMHPWVLTXXXXXXXXXXXXXXXXXXAKDAFCSWIRAYTAHRGELKRI 1577
             Q +  +KF+S+++HPWVL                   A+ AFCSW+RAYTAHRG+LKRI
Sbjct: 479  GQVYRARKFVSLDLHPWVLYLQRALESFILSEPRMNKLAQTAFCSWVRAYTAHRGDLKRI 538

Query: 1578 FMVKKLHLGHVAKSFGLRDQPSLVGGS 1658
            FMVKKLHLGHV++SFGL+ QPSLVG S
Sbjct: 539  FMVKKLHLGHVSRSFGLKQQPSLVGQS 565


>emb|CBI27769.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  704 bits (1818), Expect = 0.0
 Identities = 360/507 (71%), Positives = 410/507 (80%)
 Frame = +3

Query: 138  LVNAATGTGKTIAYLAPIIHHLHLYHPRIDRAAGTYALVLVPTRELCLQVHEILHKLLHR 317
            LVNAATGTGKTIAYLAP+I+HLH Y PRI+R+AGT+ALVLVPTRELC+QV+EIL KLLHR
Sbjct: 72   LVNAATGTGKTIAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLHR 131

Query: 318  FFWIVPGYVMGGESRSKEKSRLRKGISILVATPGRLLDHLKNTTSFVHANLRWIIFDEAD 497
            F WIVPGYVMGGE+RSKEK+RLRKGISILVATPGRLLDHLKNT+SF+H NLRWIIFDEAD
Sbjct: 132  FHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKNTSSFLHTNLRWIIFDEAD 191

Query: 498  RILELGYGKEIEEILGFLGSRKDGGVSEDNTFSKHSKPQRQNLLLSATLNEKVNHLAKMS 677
            RILELG+GKEIEEIL  L                  + QRQNLLLSATLNEKVNHLA++S
Sbjct: 192  RILELGFGKEIEEILDLL------------------EFQRQNLLLSATLNEKVNHLAQIS 233

Query: 678  LENPVMIGIDETKLSTELSKRSVKHLKSIGSNVDDELELLGKLPNCSEADYNLPTQLIQR 857
            LENPV IG+D  K+     K  ++H  S+  +VD++ E L K+ + S  DY LP QL+QR
Sbjct: 234  LENPVTIGLDGKKMQP---KPPLEHFGSVEFDVDEDSEKLHKIISPSNGDYKLPAQLVQR 290

Query: 858  YVKVPCGSRLVILLSILRNLNEMEASQKVVVFFSTCDAVDFHHSLFSEFEWQSDPKIELH 1037
            YVKVPCGSRLV+LLSIL++L E EASQK+VVFFSTCDAVDFH+SLFS F W ++   E  
Sbjct: 291  YVKVPCGSRLVVLLSILKHLFEREASQKIVVFFSTCDAVDFHYSLFSAFLWPANLHPETE 350

Query: 1038 QKKAFLKCKTFRLHGNMEQEGRRTTFQGFKTEKSAILLCTDVAARGLDFPNVTCIIQYDS 1217
             ++ FL+ KTF+LHGNM+ E RRTTFQ FK EKSA+LL TDVAARGLDFP V CIIQYDS
Sbjct: 351  DRQMFLRFKTFQLHGNMKHEDRRTTFQTFKKEKSALLLSTDVAARGLDFPKVRCIIQYDS 410

Query: 1218 PGEASEYVHRVGRTARIGGKGEALLFLQPVEVDYLQDLQKHGVSLKEYPLLKVIDSFPLS 1397
            PGEASEYVHRVGRTAR+G +G++LLFLQPVE+DYLQDL+KHGVSL EY LLKV+DSFPLS
Sbjct: 411  PGEASEYVHRVGRTARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYSLLKVLDSFPLS 470

Query: 1398 NQRHLIKKFISIEMHPWVLTXXXXXXXXXXXXXXXXXXAKDAFCSWIRAYTAHRGELKRI 1577
             Q+H IKKFIS+EMHPW L                   AKDAFCSW+RAYTAHRGELKRI
Sbjct: 471  GQKHHIKKFISLEMHPWSLYLQKALESFIFAEPKMKKLAKDAFCSWVRAYTAHRGELKRI 530

Query: 1578 FMVKKLHLGHVAKSFGLRDQPSLVGGS 1658
            F VKKLHLGHVAKSF L+DQPSLVG S
Sbjct: 531  FQVKKLHLGHVAKSFALKDQPSLVGKS 557


>ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            17-like [Glycine max]
          Length = 596

 Score =  697 bits (1799), Expect = 0.0
 Identities = 357/507 (70%), Positives = 412/507 (81%)
 Frame = +3

Query: 138  LVNAATGTGKTIAYLAPIIHHLHLYHPRIDRAAGTYALVLVPTRELCLQVHEILHKLLHR 317
            LVNAATGTGKT+AYLAPIIHHL  Y  RI R+ GT+ALVLVPTRELCLQV+EIL KLLHR
Sbjct: 67   LVNAATGTGKTVAYLAPIIHHLQGYENRIQRSDGTFALVLVPTRELCLQVYEILQKLLHR 126

Query: 318  FFWIVPGYVMGGESRSKEKSRLRKGISILVATPGRLLDHLKNTTSFVHANLRWIIFDEAD 497
            F WIVPGY+MGGE RSKEKSRLRKGISIL+ATPGRLLDHLKNTT+F+++NLRWIIFDEAD
Sbjct: 127  FHWIVPGYIMGGEKRSKEKSRLRKGISILIATPGRLLDHLKNTTAFLYSNLRWIIFDEAD 186

Query: 498  RILELGYGKEIEEILGFLGSRKDGGVSEDNTFSKHSKPQRQNLLLSATLNEKVNHLAKMS 677
            RILELG+GK+IEEIL  LGSRK G   ++NT   HSK QRQNLLLSATLNEKVNHLAKMS
Sbjct: 187  RILELGFGKDIEEILDLLGSRKKGHGDQENTVLTHSKIQRQNLLLSATLNEKVNHLAKMS 246

Query: 678  LENPVMIGIDETKLSTELSKRSVKHLKSIGSNVDDELELLGKLPNCSEADYNLPTQLIQR 857
            L+NPVMIG+D  K+       ++K L S  S+ D E +   K+P  +  DY +P QLIQR
Sbjct: 247  LDNPVMIGLDGKKME---PISTIKRLDSSESDEDSEDKYSSKVP--TVGDYKVPIQLIQR 301

Query: 858  YVKVPCGSRLVILLSILRNLNEMEASQKVVVFFSTCDAVDFHHSLFSEFEWQSDPKIELH 1037
            Y+KVPCGSRL +LLSIL++L E E SQKVV+FFSTCDAVDFH+SL SEF++ S P+ E  
Sbjct: 302  YMKVPCGSRLPVLLSILKHLFEREPSQKVVLFFSTCDAVDFHYSLLSEFQFSSYPQTE-G 360

Query: 1038 QKKAFLKCKTFRLHGNMEQEGRRTTFQGFKTEKSAILLCTDVAARGLDFPNVTCIIQYDS 1217
             ++ FL CKTFRLHGNM+QE RRT+FQ FKTEKSA+LL TDV+ARGLDFP V CIIQYDS
Sbjct: 361  VRQVFLGCKTFRLHGNMQQEDRRTSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDS 420

Query: 1218 PGEASEYVHRVGRTARIGGKGEALLFLQPVEVDYLQDLQKHGVSLKEYPLLKVIDSFPLS 1397
            PGEA+EYVHRVGRTAR+G +GE+LLFLQPVE+DYLQDL+KHGVSL EYP+LKV+DSFPL 
Sbjct: 421  PGEATEYVHRVGRTARLGERGESLLFLQPVEIDYLQDLEKHGVSLTEYPVLKVLDSFPL- 479

Query: 1398 NQRHLIKKFISIEMHPWVLTXXXXXXXXXXXXXXXXXXAKDAFCSWIRAYTAHRGELKRI 1577
             Q++  KK + +E HPWVL                   A+ AFCSW+RAYTAHRGELKRI
Sbjct: 480  -QKNHTKKSVFLESHPWVLCLQKALEAFIMSKPEMDEHARKAFCSWVRAYTAHRGELKRI 538

Query: 1578 FMVKKLHLGHVAKSFGLRDQPSLVGGS 1658
             M+KKLHLGHVAKSF L+ QPSLVG S
Sbjct: 539  XMIKKLHLGHVAKSFALKQQPSLVGQS 565


>ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533687|gb|EEF35422.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 603

 Score =  691 bits (1784), Expect = 0.0
 Identities = 350/505 (69%), Positives = 404/505 (80%)
 Frame = +3

Query: 138  LVNAATGTGKTIAYLAPIIHHLHLYHPRIDRAAGTYALVLVPTRELCLQVHEILHKLLHR 317
            LVNAATGTGKT+AYLAPIIHHL  Y PRI+RA GT+ALVLVPTRELCLQV+EIL  LLHR
Sbjct: 73   LVNAATGTGKTVAYLAPIIHHLQSYSPRIERAHGTFALVLVPTRELCLQVYEILQGLLHR 132

Query: 318  FFWIVPGYVMGGESRSKEKSRLRKGISILVATPGRLLDHLKNTTSFVHANLRWIIFDEAD 497
            F WIVPGY+MGGESRSKEK+RLRKGISILVATPGRLLDHLKNT+SF H NLRWIIFDEAD
Sbjct: 133  FHWIVPGYIMGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFSHTNLRWIIFDEAD 192

Query: 498  RILELGYGKEIEEILGFLGSRKDGGVSEDNTFSKHSKPQRQNLLLSATLNEKVNHLAKMS 677
            RILELG+GKEIE+IL  LGSR    V + N  S  S  QRQNLLLSATLNEKVNHLA +S
Sbjct: 193  RILELGFGKEIEDILDLLGSRLTRSVGKGNRDSSISNYQRQNLLLSATLNEKVNHLANIS 252

Query: 678  LENPVMIGIDETKLSTELSKRSVKHLKSIGSNVDDELELLGKLPNCSEADYNLPTQLIQR 857
            LENPVMIG+D+ K+  E     ++H KS+ S+ DDELE   K+   S  D+ +P QL+Q+
Sbjct: 253  LENPVMIGLDDEKMQPE---PLLEHTKSLKSDADDELEHPSKVLKPSTGDFKVPVQLVQK 309

Query: 858  YVKVPCGSRLVILLSILRNLNEMEASQKVVVFFSTCDAVDFHHSLFSEFEWQSDPKIELH 1037
            YVKVPCGSRL  LLSIL++L E  ASQK+VVFFSTCDAVDFH+SL SEF +    + E  
Sbjct: 310  YVKVPCGSRLATLLSILKHLFEKRASQKIVVFFSTCDAVDFHYSLLSEFRFSCTSQSEAE 369

Query: 1038 QKKAFLKCKTFRLHGNMEQEGRRTTFQGFKTEKSAILLCTDVAARGLDFPNVTCIIQYDS 1217
              + FL+CKTFRLHGNM+QE RR TFQ FK++K A+LL TDVAARGLD P VT IIQYD+
Sbjct: 370  AAEMFLRCKTFRLHGNMKQEDRRDTFQAFKSDKLALLLSTDVAARGLDLPKVTWIIQYDT 429

Query: 1218 PGEASEYVHRVGRTARIGGKGEALLFLQPVEVDYLQDLQKHGVSLKEYPLLKVIDSFPLS 1397
            PGEA+EYVHRVGRTAR+G KG++LLFLQPVEVDYLQ+LQKHGVSL EYP+LK++DSF   
Sbjct: 430  PGEATEYVHRVGRTARMGEKGDSLLFLQPVEVDYLQELQKHGVSLTEYPILKMLDSFSFY 489

Query: 1398 NQRHLIKKFISIEMHPWVLTXXXXXXXXXXXXXXXXXXAKDAFCSWIRAYTAHRGELKRI 1577
             Q H  KKF+S+E HPW+L+                  A++AF SW+RAYTAHRGELKRI
Sbjct: 490  EQMHRNKKFVSLESHPWLLSLQKALESFIAAQPKMNKLAQNAFLSWVRAYTAHRGELKRI 549

Query: 1578 FMVKKLHLGHVAKSFGLRDQPSLVG 1652
            FMV+KLHLGHVAKSF L+ QPS+VG
Sbjct: 550  FMVQKLHLGHVAKSFALKQQPSVVG 574