BLASTX nr result

ID: Coptis24_contig00006110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006110
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001067784.1| Os11g0428800 [Oryza sativa Japonica Group] g...   127   3e-27
ref|XP_002449820.1| hypothetical protein SORBIDRAFT_05g023920 [S...   126   5e-27
gb|EAZ01602.1| hypothetical protein OsI_23639 [Oryza sativa Indi...   125   1e-26
ref|XP_002464007.1| hypothetical protein SORBIDRAFT_01g010500 [S...   119   8e-25
ref|NP_001147285.1| chemocyanin precursor [Zea mays] gi|19560948...   117   2e-24

>ref|NP_001067784.1| Os11g0428800 [Oryza sativa Japonica Group]
           gi|62734521|gb|AAX96630.1| basic blue copper protein
           [Oryza sativa Japonica Group] gi|77550421|gb|ABA93218.1|
           Plastocyanin-like domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113645006|dbj|BAF28147.1| Os11g0428800 [Oryza sativa
           Japonica Group] gi|125534214|gb|EAY80762.1| hypothetical
           protein OsI_35940 [Oryza sativa Indica Group]
           gi|125576993|gb|EAZ18215.1| hypothetical protein
           OsJ_33756 [Oryza sativa Japonica Group]
           gi|215769454|dbj|BAH01683.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 124

 Score =  127 bits (318), Expect = 3e-27
 Identities = 63/118 (53%), Positives = 78/118 (66%)
 Frame = -3

Query: 617 IQVLFLALLITAYLKNSDAATHQVGETNGWGFSVSYTDWANEKSFAAGDTLVFNYPASAH 438
           + ++ L LL  A+     A TH VG++NGW FSVS+  WA+ K FAAGDTLVFNY   AH
Sbjct: 6   VGLVVLGLLALAFSTTVLAETHVVGDSNGWDFSVSFDSWADGKVFAAGDTLVFNYKPGAH 65

Query: 437 NVVPVKIAGYRSCKALPSDMTKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQVNA 264
           NV+ V  A YRSCK   S  + A ATG   F LKKG NY+IC   GHC++GMK++V A
Sbjct: 66  NVLAVDAATYRSCKVGSSADSVAAATGTASFLLKKGVNYYICGVPGHCAAGMKLRVVA 123


>ref|XP_002449820.1| hypothetical protein SORBIDRAFT_05g023920 [Sorghum bicolor]
           gi|241935663|gb|EES08808.1| hypothetical protein
           SORBIDRAFT_05g023920 [Sorghum bicolor]
          Length = 126

 Score =  126 bits (316), Expect = 5e-27
 Identities = 64/127 (50%), Positives = 82/127 (64%), Gaps = 3/127 (2%)
 Frame = -3

Query: 635 MRRSKCIQVLF---LALLITAYLKNSDAATHQVGETNGWGFSVSYTDWANEKSFAAGDTL 465
           M R  C  VL     +LL+ + L +++  TH VG++ GWGFSVSY  W+  K+FAAGDTL
Sbjct: 1   MGRGMCSAVLVALGFSLLVCSALVSAE--THVVGDSKGWGFSVSYDSWSGGKTFAAGDTL 58

Query: 464 VFNYPASAHNVVPVKIAGYRSCKALPSDMTKAQATGNDKFTLKKGANYFICSYAGHCSSG 285
           VFNY A  HN V V  + YRSCK   +    A A+G  +F LKKG NYFIC   GHC++G
Sbjct: 59  VFNYQAGVHNAVAVSASEYRSCKVRSAADAAATASGTARFDLKKGVNYFICGVPGHCAAG 118

Query: 284 MKIQVNA 264
           MK++V A
Sbjct: 119 MKLRVVA 125


>gb|EAZ01602.1| hypothetical protein OsI_23639 [Oryza sativa Indica Group]
          Length = 127

 Score =  125 bits (313), Expect = 1e-26
 Identities = 59/100 (59%), Positives = 69/100 (69%)
 Frame = -3

Query: 563 AATHQVGETNGWGFSVSYTDWANEKSFAAGDTLVFNYPASAHNVVPVKIAGYRSCKALPS 384
           A TH VG++ GWGFSV+Y  WA+ K+FAAGDTLVFNY A  HNVV    A YRSCK   S
Sbjct: 27  AETHVVGDSKGWGFSVAYDSWASGKAFAAGDTLVFNYQAGVHNVVAASAAEYRSCKVRNS 86

Query: 383 DMTKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQVNA 264
               A A G+ K  LKKG NYFIC   GHC++GMK++V A
Sbjct: 87  ADAAATAAGSAKLDLKKGVNYFICGVPGHCATGMKLRVVA 126


>ref|XP_002464007.1| hypothetical protein SORBIDRAFT_01g010500 [Sorghum bicolor]
           gi|241917861|gb|EER91005.1| hypothetical protein
           SORBIDRAFT_01g010500 [Sorghum bicolor]
          Length = 128

 Score =  119 bits (297), Expect = 8e-25
 Identities = 59/123 (47%), Positives = 78/123 (63%)
 Frame = -3

Query: 632 RRSKCIQVLFLALLITAYLKNSDAATHQVGETNGWGFSVSYTDWANEKSFAAGDTLVFNY 453
           R S  + +  + L +  + + +++A + VG+ +GW F+ +  +W   K F AGD LVF Y
Sbjct: 9   RGSNAVVLALVLLCVLLHGEFAESAVYTVGDRSGWSFNTA--NWPKGKRFRAGDVLVFKY 66

Query: 452 PASAHNVVPVKIAGYRSCKALPSDMTKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQ 273
            A AHNVVPV  AGYRSC A      +A  TGND+ TLK+GANYFICS+ GHC  GMKI 
Sbjct: 67  NAKAHNVVPVSAAGYRSCSAPRG--VRALTTGNDRVTLKRGANYFICSFPGHCQGGMKIA 124

Query: 272 VNA 264
           V A
Sbjct: 125 VTA 127


>ref|NP_001147285.1| chemocyanin precursor [Zea mays] gi|195609488|gb|ACG26574.1|
           chemocyanin precursor [Zea mays]
           gi|413933304|gb|AFW67855.1| chemocyanin [Zea mays]
          Length = 132

 Score =  117 bits (293), Expect = 2e-24
 Identities = 58/113 (51%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
 Frame = -3

Query: 596 LLITAYLKN--SDAATHQVGETNGWGFSVSYTDWANEKSFAAGDTLVFNYPASAHNVVPV 423
           +L+ A L+   +++A + VG+  GW F+ +   W N K F AGD LVF Y A AHNVVPV
Sbjct: 23  VLLCALLRGEFAESAVYTVGDRGGWSFNTA--SWPNGKRFRAGDVLVFRYDARAHNVVPV 80

Query: 422 KIAGYRSCKALPSDMTKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQVNA 264
             AGY SC A   +  +A ATGND+ TL++GANYFICS+ GHC +GMK+ V A
Sbjct: 81  SAAGYSSCSA--PEGARALATGNDRVTLRRGANYFICSFPGHCQAGMKVAVTA 131


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