BLASTX nr result

ID: Coptis24_contig00006105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006105
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546844.1| PREDICTED: LOW QUALITY PROTEIN: non-specific...   101   2e-19
ref|NP_001236847.1| uncharacterized protein LOC100306055 [Glycin...   101   2e-19
ref|XP_002330868.1| predicted protein [Populus trichocarpa] gi|2...   100   4e-19
ref|XP_002330866.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
ref|XP_002531706.1| Nonspecific lipid-transfer protein precursor...    96   7e-18

>ref|XP_003546844.1| PREDICTED: LOW QUALITY PROTEIN: non-specific lipid-transfer protein
           8-like [Glycine max]
          Length = 138

 Score =  101 bits (251), Expect = 2e-19
 Identities = 44/91 (48%), Positives = 59/91 (64%)
 Frame = +2

Query: 152 ITCSNVVSDLSPCIQYLQTGTGSPTAACCXXXXXXXXXXXXXXXXXXXCNCIKSTAQQLS 331
           I+CS+V+ DL PC+ YL +G+G P AACC                   CNCIKST++ ++
Sbjct: 48  ISCSDVIKDLRPCVSYLVSGSGQPPAACCSGAKALASAATTSEDKKAACNCIKSTSKSIN 107

Query: 332 INAAAAQALPGSCGITLPFTVSASVDCSKIG 424
           IN+  AQALPG+CGITLP  +S + DCSK+G
Sbjct: 108 INSQLAQALPGNCGITLPVAISPNADCSKVG 138


>ref|NP_001236847.1| uncharacterized protein LOC100306055 [Glycine max]
           gi|255627401|gb|ACU14045.1| unknown [Glycine max]
          Length = 139

 Score =  101 bits (251), Expect = 2e-19
 Identities = 44/91 (48%), Positives = 59/91 (64%)
 Frame = +2

Query: 152 ITCSNVVSDLSPCIQYLQTGTGSPTAACCXXXXXXXXXXXXXXXXXXXCNCIKSTAQQLS 331
           I+CS+V+ DL PC+ YL +G+G P AACC                   CNCIKST++ ++
Sbjct: 49  ISCSDVIKDLRPCVSYLVSGSGQPPAACCSGAKALASAATTSEDKKAACNCIKSTSKSIN 108

Query: 332 INAAAAQALPGSCGITLPFTVSASVDCSKIG 424
           IN+  AQALPG+CGITLP  +S + DCSK+G
Sbjct: 109 INSQLAQALPGNCGITLPVAISPNADCSKVG 139


>ref|XP_002330868.1| predicted protein [Populus trichocarpa] gi|222872690|gb|EEF09821.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  100 bits (249), Expect = 4e-19
 Identities = 46/90 (51%), Positives = 57/90 (63%)
 Frame = +2

Query: 152 ITCSNVVSDLSPCIQYLQTGTGSPTAACCXXXXXXXXXXXXXXXXXXXCNCIKSTAQQLS 331
           I+CS+V+ DL PC++YL  GTG P AACC                   CNCIKS ++Q++
Sbjct: 28  ISCSDVIKDLRPCVKYLMNGTGKPPAACCSGISAIQATASTTADKQAACNCIKSASKQIN 87

Query: 332 INAAAAQALPGSCGITLPFTVSASVDCSKI 421
            N   AQALP +CGITLPF VS +VDCSKI
Sbjct: 88  PNPQLAQALPANCGITLPFAVSPNVDCSKI 117


>ref|XP_002330866.1| predicted protein [Populus trichocarpa] gi|222872688|gb|EEF09819.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 45/89 (50%), Positives = 56/89 (62%)
 Frame = +2

Query: 152 ITCSNVVSDLSPCIQYLQTGTGSPTAACCXXXXXXXXXXXXXXXXXXXCNCIKSTAQQLS 331
           I+CS+V+ DL PC+ YL  GTG P AACC                   CNCIKS ++Q++
Sbjct: 18  ISCSDVIKDLRPCVSYLMNGTGKPPAACCSGISAIQASASTTADKQAACNCIKSASKQIN 77

Query: 332 INAAAAQALPGSCGITLPFTVSASVDCSK 418
            +   AQALP +CGITLPFTVS +VDCSK
Sbjct: 78  PSPQLAQALPANCGITLPFTVSPNVDCSK 106


>ref|XP_002531706.1| Nonspecific lipid-transfer protein precursor, putative [Ricinus
           communis] gi|223528649|gb|EEF30665.1| Nonspecific
           lipid-transfer protein precursor, putative [Ricinus
           communis] gi|255957398|emb|CBA13553.1| putative
           nonspecific lipid transfer protein precursor [Ricinus
           communis]
          Length = 122

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 44/89 (49%), Positives = 56/89 (62%)
 Frame = +2

Query: 152 ITCSNVVSDLSPCIQYLQTGTGSPTAACCXXXXXXXXXXXXXXXXXXXCNCIKSTAQQLS 331
           I+CS+V+ DL PC+ YL  GTG+P AACC                   C CIK+ AQQL+
Sbjct: 29  ISCSDVIKDLRPCVNYLVNGTGTPPAACCAGASALASAATTTADKRAACACIKTAAQQLN 88

Query: 332 INAAAAQALPGSCGITLPFTVSASVDCSK 418
            NA  AQALP +CGI+LP+T+S + DCSK
Sbjct: 89  PNAQLAQALPANCGISLPYTISPNFDCSK 117


Top