BLASTX nr result

ID: Coptis24_contig00006101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006101
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ91133.1| ampk protein [Platanus x acerifolia]                   60   2e-07

>emb|CAJ91133.1| ampk protein [Platanus x acerifolia]
          Length = 205

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
 Frame = -1

Query: 318 MECHMAGVMRCCLDKNCSWF---SPNIDMENIHRRRFKVGLCNTRRDYQKRTLL---SNG 157
           MEC M GV RCC  K+ SWF   S  +  ENI R    V LCN R   ++ T L   S G
Sbjct: 1   MECQMTGVARCCSAKHDSWFFWHSRKLGQENIQRPSCNVALCNLRMGSRRLTFLHHASIG 60

Query: 156 KYPTRQA----FALPIXXXXXXXXXXXXXXXSDGDEA----TSDDVLSQKLARDELKSLL 1
           K P + +    F++P+               S+ DE     +S + LSQ L  D LKSLL
Sbjct: 61  KSPMQHSSWRIFSMPVSVEKESSSLSPEGYTSNSDEVAEKDSSKEFLSQPLDGDGLKSLL 120


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