BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006093
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   374   e-101
ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycin...   370   e-100
ref|XP_002513323.1| membrane associated ring finger 1,8, putativ...   363   5e-98
ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|2...   356   8e-96
ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   354   2e-95

>ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Vitis vinifera]
            gi|297735744|emb|CBI18431.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  374 bits (960), Expect = e-101
 Identities = 195/259 (75%), Positives = 205/259 (79%), Gaps = 20/259 (7%)
 Frame = -1

Query: 1073 MQLVSTGSSGTEDISETEPILPQS------DESPFSCEIRP------LVD--------DE 954
            MQLVS     TED SETEPIL QS      +ES  SCEIR       +VD        DE
Sbjct: 1    MQLVSNDRQ-TEDGSETEPILCQSNIEQRLEESSTSCEIRTVEVDCSIVDGDLENLDTDE 59

Query: 953  FCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECR 774
             C LVN  QP CRICLDIGGEDLIAPC CRGTQKYVHRSCLD+WRSTKEGFAFAHCTECR
Sbjct: 60   NCALVNADQPQCRICLDIGGEDLIAPCHCRGTQKYVHRSCLDNWRSTKEGFAFAHCTECR 119

Query: 773  ALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREMFGY 594
            A+FILRANVPPDRWWLRLKFQ LV RDHAFIF             VYKFYGE+LREMFGY
Sbjct: 120  AVFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGVLVYKFYGEELREMFGY 179

Query: 593  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNK 414
            +EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE NK
Sbjct: 180  DEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREVNK 239

Query: 413  APPELDPSYVTELKMLGLY 357
              PELDPS+VTEL+MLGLY
Sbjct: 240  DVPELDPSHVTELRMLGLY 258


>ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycine max]
            gi|255638130|gb|ACU19379.1| unknown [Glycine max]
          Length = 257

 Score =  370 bits (951), Expect = e-100
 Identities = 188/259 (72%), Positives = 202/259 (77%), Gaps = 20/259 (7%)
 Frame = -1

Query: 1073 MQLVSTGSSGTEDISETEPIL-------PQSDESPFSCEIRPLVD-------------DE 954
            MQL S G    E+ SE+EPIL       P   ES FSCEI P+               DE
Sbjct: 1    MQLASNGDK--EECSESEPILNHHHLHLPPPGESSFSCEIIPISAAASGDDDLQNVRVDE 58

Query: 953  FCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECR 774
             C+LVN  QP CRICLDIGGEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAF+HCTECR
Sbjct: 59   TCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECR 118

Query: 773  ALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREMFGY 594
            A+FILRANVPPDRWWLRLKFQFLV RDHAFIF             VYKFYG++LREMFGY
Sbjct: 119  AVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGY 178

Query: 593  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNK 414
            EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE  K
Sbjct: 179  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVK 238

Query: 413  APPELDPSYVTELKMLGLY 357
              PELDPS+VTEL+MLGLY
Sbjct: 239  NVPELDPSHVTELRMLGLY 257


>ref|XP_002513323.1| membrane associated ring finger 1,8, putative [Ricinus communis]
            gi|223547231|gb|EEF48726.1| membrane associated ring
            finger 1,8, putative [Ricinus communis]
          Length = 256

 Score =  363 bits (932), Expect = 5e-98
 Identities = 187/257 (72%), Positives = 200/257 (77%), Gaps = 18/257 (7%)
 Frame = -1

Query: 1073 MQLVSTGSSGTEDISETEPILPQS------DESPFSCEIRPLVDD------------EFC 948
            MQLVS  S   EDISE EPIL QS      +ES  SCEI  +  D            E C
Sbjct: 1    MQLVSNDSQ-KEDISEREPILRQSNIVQRSEESSSSCEITSIGQDCDGDDLESVHVDETC 59

Query: 947  NLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECRAL 768
            +LVN  QP CRICLD GGEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAFAHCTECRA 
Sbjct: 60   HLVNPDQPQCRICLDNGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAS 119

Query: 767  FILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREMFGYEE 588
            FILRANVPPDRWWLRLKFQFLV RDH FIF             VYKFYGE+LREMFGYEE
Sbjct: 120  FILRANVPPDRWWLRLKFQFLVARDHVFIFVVVQLIVAFLGMFVYKFYGEELREMFGYEE 179

Query: 587  HPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNKAP 408
            HPYGFYT+AVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE +K  
Sbjct: 180  HPYGFYTVAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREASKNV 239

Query: 407  PELDPSYVTELKMLGLY 357
            PELD ++VTEL+MLGLY
Sbjct: 240  PELDATHVTELRMLGLY 256


>ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|222864413|gb|EEF01544.1|
            predicted protein [Populus trichocarpa]
          Length = 259

 Score =  356 bits (913), Expect = 8e-96
 Identities = 186/260 (71%), Positives = 201/260 (77%), Gaps = 21/260 (8%)
 Frame = -1

Query: 1073 MQLVSTGSSGTEDISETEPILPQS-------DESPFSCEIRPL-------VDD------- 957
            MQLVS  S   EDISE+EPIL  S       +ESP S EI+ L       VDD       
Sbjct: 1    MQLVSNDSR-KEDISESEPILSHSNISQHSEEESPSSLEIKSLGRDCEIHVDDSESIQID 59

Query: 956  EFCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTEC 777
            E C+LVN   P CRICLD  GEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAFAHCTEC
Sbjct: 60   ETCHLVNPDHPQCRICLDNEGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTEC 119

Query: 776  RALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREMFG 597
            RA+F+LRANVP DRWWLRLKFQFLV RDHAFIF             VYKFYGE+LREMFG
Sbjct: 120  RAMFVLRANVPADRWWLRLKFQFLVARDHAFIFVVVQLIVAFLGVLVYKFYGEELREMFG 179

Query: 596  YEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDN 417
            YEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE +
Sbjct: 180  YEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREAS 239

Query: 416  KAPPELDPSYVTELKMLGLY 357
            K  PEL  S+V+EL+MLGLY
Sbjct: 240  KDVPELGASHVSELRMLGLY 259


>ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1-like [Cucumis sativus]
            gi|449519260|ref|XP_004166653.1| PREDICTED: E3
            ubiquitin-protein ligase MARCH1-like [Cucumis sativus]
          Length = 261

 Score =  354 bits (909), Expect = 2e-95
 Identities = 180/262 (68%), Positives = 196/262 (74%), Gaps = 23/262 (8%)
 Frame = -1

Query: 1073 MQLVSTGSSGTEDISETEPIL------PQSDESPFSCEIRPLVD---------------- 960
            MQLV       +DI E  PIL      PQS  S  S EI  ++                 
Sbjct: 1    MQLVPNHDENKDDILERAPILSQLDFLPQSVGSSSSAEIAEIIAIGRESSVSDDDLHNPN 60

Query: 959  -DEFCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCT 783
             DE C+LVN  QP CRICLD GGEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAFAHCT
Sbjct: 61   IDETCHLVND-QPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCT 119

Query: 782  ECRALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREM 603
            ECRA+F+LRANVPPDRWWLRLKFQFLV RDHAFIF             VYKFYGE+LREM
Sbjct: 120  ECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 179

Query: 602  FGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENRE 423
            FGYEEHPYGFY MAVLAI+LVGLLYGFFIAIICGQRINERHYHVLAKQELTKE++VE+RE
Sbjct: 180  FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 239

Query: 422  DNKAPPELDPSYVTELKMLGLY 357
             NK  PELDPS+V EL++LGLY
Sbjct: 240  HNKNVPELDPSHVMELRLLGLY 261