BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006088
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADZ76155.1| beta-tubulin [Vanilla planifolia]                       75   8e-21
gb|AAO46131.1| beta-tubulin [Streblomastix strix]                      67   3e-18
ref|XP_003110714.1| CRE-TBB-1 protein [Caenorhabditis remanei] g...    60   5e-17
gb|ABO61509.1| beta tubulin [Bodonidae sp. SL200c]                     65   8e-17
ref|XP_004142743.1| PREDICTED: UDP-glucuronic acid decarboxylase...    89   4e-16

>gb|ADZ76155.1| beta-tubulin [Vanilla planifolia]
          Length = 447

 Score = 75.1 bits (183), Expect(2) = 8e-21
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +1

Query: 139 KQMWDAKNMMCAADPRHGRYLTVSAMFRGKMSTKEV 246
           +QMWD+KNMMCAADPRHGRYLT SAMFRGKMSTKEV
Sbjct: 291 QQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326



 Score = 50.1 bits (118), Expect(2) = 8e-21
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = +3

Query: 249 VDEQMINVQNKNLFYFVEWIPNNVKSTV 332
           VDEQMINVQNKN  YFVE IPNNVKS+V
Sbjct: 326 VDEQMINVQNKNSSYFVEGIPNNVKSSV 353


>gb|AAO46131.1| beta-tubulin [Streblomastix strix]
          Length = 217

 Score = 66.6 bits (161), Expect(2) = 3e-18
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 139 KQMWDAKNMMCAADPRHGRYLTVSAMFRGKMSTKEV 246
           +QM+DAKNMM A+DPRHGRYLT SAMFRG+MSTKEV
Sbjct: 61  QQMFDAKNMMAASDPRHGRYLTASAMFRGRMSTKEV 96



 Score = 50.1 bits (118), Expect(2) = 3e-18
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = +3

Query: 249 VDEQMINVQNKNLFYFVEWIPNNVKSTV 332
           VDEQM+NVQNKN  Y VEWIPNN+KS +
Sbjct: 96  VDEQMLNVQNKNSSYSVEWIPNNIKSAI 123


>ref|XP_003110714.1| CRE-TBB-1 protein [Caenorhabditis remanei]
           gi|308242594|gb|EFO86546.1| CRE-TBB-1 protein
           [Caenorhabditis remanei]
          Length = 459

 Score = 59.7 bits (143), Expect(2) = 5e-17
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = +1

Query: 139 KQMWDAKNMMCAADPRHGRYLTVSAMFRGKMSTK 240
           +QM+DAKNMM A DPRHGRYLTV+AMFRG+MS +
Sbjct: 291 QQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMR 324



 Score = 52.8 bits (125), Expect(2) = 5e-17
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +3

Query: 249 VDEQMINVQNKNLFYFVEWIPNNVKSTV 332
           VDEQM+NVQNKN  YFVEWIPNNVK+ V
Sbjct: 336 VDEQMLNVQNKNSSYFVEWIPNNVKTAV 363


>gb|ABO61509.1| beta tubulin [Bodonidae sp. SL200c]
          Length = 376

 Score = 65.5 bits (158), Expect(2) = 8e-17
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 139 KQMWDAKNMMCAADPRHGRYLTVSAMFRGKMSTKEV 246
           +QM+DAKNMM AADPRHGRYLT SA+FRG+MSTKEV
Sbjct: 283 QQMFDAKNMMQAADPRHGRYLTASALFRGRMSTKEV 318



 Score = 46.2 bits (108), Expect(2) = 8e-17
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = +3

Query: 249 VDEQMINVQNKNLFYFVEWIPNNVKSTV 332
           VDEQM+NVQNKN  YFVE IPNN+K+++
Sbjct: 318 VDEQMLNVQNKNSSYFVERIPNNMKTSI 345


>ref|XP_004142743.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis
           sativus] gi|449483862|ref|XP_004156715.1| PREDICTED:
           UDP-glucuronic acid decarboxylase 1-like [Cucumis
           sativus]
          Length = 346

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +1

Query: 1   VAETLMFNYHRQHGIEVRIARIFNTYGPRMNIDDGRVVSNFIA 129
           VAETLMF+YHRQHGIE+RIARIFNTYGPRMNIDDGRVVSNFIA
Sbjct: 182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIA 224