BLASTX nr result

ID: Coptis24_contig00006087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006087
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172348.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...   150   8e-35
ref|XP_004161837.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...   150   8e-35
ref|XP_004147894.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...   150   8e-35
ref|XP_004137501.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...   150   8e-35
gb|AGE44289.1| beta-tubulin [Dimocarpus longan]                       150   8e-35

>ref|XP_004172348.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 446

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180
           RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP
Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272

Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255
           LTSRGS Q+RAL V ELTQ MWD KN
Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298


>ref|XP_004161837.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 445

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180
           RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP
Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272

Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255
           LTSRGS Q+RAL V ELTQ MWD KN
Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298


>ref|XP_004147894.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 446

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180
           RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP
Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272

Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255
           LTSRGS Q+RAL V ELTQ MWD KN
Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298


>ref|XP_004137501.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 445

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180
           RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP
Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272

Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255
           LTSRGS Q+RAL V ELTQ MWD KN
Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298


>gb|AGE44289.1| beta-tubulin [Dimocarpus longan]
          Length = 446

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180
           RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP
Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272

Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255
           LTSRGS Q+RAL V ELTQ MWD KN
Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298


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