BLASTX nr result
ID: Coptis24_contig00006087
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006087 (256 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004172348.1| PREDICTED: tubulin beta-1 chain-like [Cucumi... 150 8e-35 ref|XP_004161837.1| PREDICTED: tubulin beta-1 chain-like [Cucumi... 150 8e-35 ref|XP_004147894.1| PREDICTED: tubulin beta-1 chain-like [Cucumi... 150 8e-35 ref|XP_004137501.1| PREDICTED: tubulin beta-1 chain-like [Cucumi... 150 8e-35 gb|AGE44289.1| beta-tubulin [Dimocarpus longan] 150 8e-35 >ref|XP_004172348.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus] Length = 446 Score = 150 bits (380), Expect = 8e-35 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%) Frame = +1 Query: 1 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272 Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255 LTSRGS Q+RAL V ELTQ MWD KN Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298 >ref|XP_004161837.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus] Length = 445 Score = 150 bits (380), Expect = 8e-35 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%) Frame = +1 Query: 1 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272 Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255 LTSRGS Q+RAL V ELTQ MWD KN Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298 >ref|XP_004147894.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus] Length = 446 Score = 150 bits (380), Expect = 8e-35 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%) Frame = +1 Query: 1 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272 Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255 LTSRGS Q+RAL V ELTQ MWD KN Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298 >ref|XP_004137501.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus] Length = 445 Score = 150 bits (380), Expect = 8e-35 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%) Frame = +1 Query: 1 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272 Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255 LTSRGS Q+RAL V ELTQ MWD KN Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298 >gb|AGE44289.1| beta-tubulin [Dimocarpus longan] Length = 446 Score = 150 bits (380), Expect = 8e-35 Identities = 76/86 (88%), Positives = 78/86 (90%), Gaps = 1/86 (1%) Frame = +1 Query: 1 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKIVVNLIMFPRLHFFKVGFAP 180 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK+ VNLI FPRLHFF VGFAP Sbjct: 213 RTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272 Query: 181 LTSRGS-QHRALIVLELTQ*MWDVKN 255 LTSRGS Q+RAL V ELTQ MWD KN Sbjct: 273 LTSRGSQQYRALTVPELTQQMWDAKN 298