BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006063
         (1662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleop...   323   6e-86
ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|2...   317   5e-84
ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleop...   314   5e-83
ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814...   308   3e-81
ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807...   308   3e-81

>ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
           [Vitis vinifera] gi|297743756|emb|CBI36639.3| unnamed
           protein product [Vitis vinifera]
          Length = 340

 Score =  323 bits (829), Expect = 6e-86
 Identities = 154/208 (74%), Positives = 176/208 (84%)
 Frame = -2

Query: 953 YADSYHPIQSGSIDGTDILPHDNAVYRALLCSSAGLYDPFGDANLIGDPYCILFLGRLSR 774
           YA+SYHPIQ+GSIDGTD LPHDNAVYRALLCSSAGLYDPFGD  +IGDPYC +F+G L+ 
Sbjct: 11  YAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKVIGDPYCTVFVGHLNH 70

Query: 773 LTNEHTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFVEFQSQREMRRAYQDAHHSIIDDI 594
           LT E TLHKAMSK+G+VK+LRLVRHIVTGAS GYAFVE++++REMRRAY+DAHHS+IDD 
Sbjct: 71  LTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETEREMRRAYEDAHHSMIDDC 130

Query: 593 EIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGGRERPFRAPLRPIPYDDLKRLGIS 414
           EIIVDYNRQQLMPGWIP          KESGQLRFGGRERPFRAPLRPIP DDLKRLGI 
Sbjct: 131 EIIVDYNRQQLMPGWIPRRLGGGIGGKKESGQLRFGGRERPFRAPLRPIPLDDLKRLGIP 190

Query: 413 PPPEGRYLTRFEDXXXXXXXXXSVDKDE 330
           PPPEGRY++RF+          ++D++E
Sbjct: 191 PPPEGRYMSRFQVPPPPRRKRSNMDREE 218


>ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|222837365|gb|EEE75744.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  317 bits (813), Expect = 5e-84
 Identities = 156/208 (75%), Positives = 169/208 (81%)
 Frame = -2

Query: 953 YADSYHPIQSGSIDGTDILPHDNAVYRALLCSSAGLYDPFGDANLIGDPYCILFLGRLSR 774
           YAD+YHPIQ+GSIDGTD  PHDNAVYRALLCSSAGLYDPFGD   IGDPYC +F+GRLS 
Sbjct: 11  YADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKAIGDPYCTIFVGRLSH 70

Query: 773 LTNEHTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFVEFQSQREMRRAYQDAHHSIIDDI 594
           LT E TL KAMSKYGKVKNLRLVRHIVTGAS GYAFVEF+++REMRRAY+D  HS IDD 
Sbjct: 71  LTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFVEFETEREMRRAYKDGQHSYIDDS 130

Query: 593 EIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGGRERPFRAPLRPIPYDDLKRLGIS 414
           EIIVDYNRQQLMPGWIP          KESGQLRFGGRERPFRAPL+ IPYDDLKRLGI 
Sbjct: 131 EIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQTIPYDDLKRLGIP 190

Query: 413 PPPEGRYLTRFEDXXXXXXXXXSVDKDE 330
           PPPEGRY++ +E          S DK+E
Sbjct: 191 PPPEGRYMSHYEVPSPPRRKRSSRDKEE 218


>ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
           protein-like [Cucumis sativus]
           gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12
           small nuclear ribonucleoprotein 35 kDa protein-like
           [Cucumis sativus]
          Length = 333

 Score =  314 bits (804), Expect = 5e-83
 Identities = 149/192 (77%), Positives = 168/192 (87%)
 Frame = -2

Query: 953 YADSYHPIQSGSIDGTDILPHDNAVYRALLCSSAGLYDPFGDANLIGDPYCILFLGRLSR 774
           YAD+YHPIQ+GSIDGTDIL HDNAVYRALLCSSAGLYDP GD  + GDPYC LF+GRLS 
Sbjct: 11  YADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPYCTLFVGRLSH 70

Query: 773 LTNEHTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFVEFQSQREMRRAYQDAHHSIIDDI 594
           LT E TL +AMSKYG+VKNLRLVRHIVTG+S GYAFVE+++++EM+RAY+DAHHS+IDD 
Sbjct: 71  LTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYKDAHHSMIDDC 130

Query: 593 EIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGGRERPFRAPLRPIPYDDLKRLGIS 414
           EIIVDYNRQ+LM GWIP          KESGQLRFGGRERPFRAPLRPIPYDDLKRLGI+
Sbjct: 131 EIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYDDLKRLGIT 190

Query: 413 PPPEGRYLTRFE 378
           PPPEGRY +RF+
Sbjct: 191 PPPEGRYKSRFQ 202


>ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
          Length = 347

 Score =  308 bits (789), Expect = 3e-81
 Identities = 145/192 (75%), Positives = 163/192 (84%)
 Frame = -2

Query: 953 YADSYHPIQSGSIDGTDILPHDNAVYRALLCSSAGLYDPFGDANLIGDPYCILFLGRLSR 774
           YADSYHPIQ+GSIDGTD++PHDNAVYRA LCSS GLYDPFGD    GDPYC LF+ RLSR
Sbjct: 13  YADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTLFVARLSR 72

Query: 773 LTNEHTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFVEFQSQREMRRAYQDAHHSIIDDI 594
           LT E  L K MSKYG+VKNLRLVR IVTGAS GYAFVE++++REMRRAY DAHH I+DD 
Sbjct: 73  LTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAHHLIVDDS 132

Query: 593 EIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGGRERPFRAPLRPIPYDDLKRLGIS 414
           EIIVDYNRQQLMPGWIP          KESGQLRFGGRE+PFRAPL+PIPY++LK+LGI 
Sbjct: 133 EIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGREKPFRAPLKPIPYEELKKLGIP 192

Query: 413 PPPEGRYLTRFE 378
           PPPEGRY++RF+
Sbjct: 193 PPPEGRYMSRFQ 204


>ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807978 [Glycine max]
          Length = 358

 Score =  308 bits (789), Expect = 3e-81
 Identities = 144/192 (75%), Positives = 163/192 (84%)
 Frame = -2

Query: 953 YADSYHPIQSGSIDGTDILPHDNAVYRALLCSSAGLYDPFGDANLIGDPYCILFLGRLSR 774
           YADSYHPIQ+GSIDGTD++PHDNAVYRA LCSS GLYDPFGD    GDPYC LF+ RLSR
Sbjct: 13  YADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPRAAGDPYCTLFVARLSR 72

Query: 773 LTNEHTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFVEFQSQREMRRAYQDAHHSIIDDI 594
           LTNE  L K MSKYG+VKN RLVR IVTGAS GYAFVE++++REMRRAY DAHH I+DD 
Sbjct: 73  LTNEDNLRKVMSKYGRVKNFRLVRDIVTGASRGYAFVEYETEREMRRAYMDAHHLIVDDS 132

Query: 593 EIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGGRERPFRAPLRPIPYDDLKRLGIS 414
           EIIVDYNRQQLMPGWIP          KESGQLRFGG+E+PFRAPL+PIPY++LK+LGI 
Sbjct: 133 EIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGKEKPFRAPLKPIPYEELKKLGIP 192

Query: 413 PPPEGRYLTRFE 378
           PPPEGRY++RF+
Sbjct: 193 PPPEGRYMSRFQ 204