BLASTX nr result

ID: Coptis24_contig00006061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006061
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323341.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
dbj|BAD27712.1| disease resistance protein Cf-2.1-like [Oryza sa...   176   2e-42
gb|EEE56614.1| hypothetical protein OsJ_05994 [Oryza sativa Japo...   176   2e-42
gb|EEC72788.1| hypothetical protein OsI_06468 [Oryza sativa Indi...   176   2e-42
ref|XP_003571148.1| PREDICTED: probable LRR receptor-like serine...   163   2e-38

>ref|XP_002323341.1| predicted protein [Populus trichocarpa] gi|222867971|gb|EEF05102.1|
           predicted protein [Populus trichocarpa]
          Length = 842

 Score =  177 bits (448), Expect = 1e-42
 Identities = 91/182 (50%), Positives = 115/182 (63%)
 Frame = +1

Query: 4   SIMQLMNDQCPHGKSNYSSLYINCGGEGTHINGDDYDEDSSTLPFKVSQKGNWAYTSSGD 183
           SI+ L N QC   KS + SL+INCGG  T   G+ YDED++T  F  S  G WAY+ SGD
Sbjct: 285 SILALSN-QC---KSKHHSLFINCGGPQTLAEGNQYDEDNATTNF-YSIPGKWAYSCSGD 339

Query: 184 FITSIANPRNNTVHSTCGISVPAAPLYSTARISALSLDYYGLCFRNGIYNVTLHFAEIVY 363
           FI++ +N  +     TCG+S+    LY TAR+  +SL YYG C   G Y V LHFAE VY
Sbjct: 340 FISTTSNSSDYVKKMTCGVSISEESLYKTARLCPVSLIYYGFCLHKGNYTVELHFAETVY 399

Query: 364 ADDDDYSSLGKRIFDIYVQGERVKKDFNVKAEANGPKKTVTRNFTANVTNNLLHIQFYWA 543
             D+DYSSLG RIFD+Y+QGER  KDFN+K +AN   +     F   V ++ L I F+WA
Sbjct: 400 TQDEDYSSLGTRIFDVYIQGERKLKDFNIKQKANSTNEAWIEKFPVIVDDHPLEIHFFWA 459

Query: 544 GK 549
           GK
Sbjct: 460 GK 461


>dbj|BAD27712.1| disease resistance protein Cf-2.1-like [Oryza sativa Japonica
           Group] gi|215686839|dbj|BAG89689.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215737123|dbj|BAG96052.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 719

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/173 (49%), Positives = 119/173 (68%), Gaps = 4/173 (2%)
 Frame = +1

Query: 43  KSNYSSLYINCGGEGTHINGDDYDEDSS---TLPFKVSQKGNWAYTSSGDFITSIANPRN 213
           K  YSSL+INCGG+   +NG+ Y++DSS   T  F +S    WAY+S+GDF+    NP  
Sbjct: 426 KPRYSSLFINCGGKSVEVNGNIYEDDSSRIGTSTFVLSNDRKWAYSSTGDFV---GNPDA 482

Query: 214 NTV-HSTCGISVPAAPLYSTARISALSLDYYGLCFRNGIYNVTLHFAEIVYADDDDYSSL 390
           + +  +T  +++    LY+ AR+S LSL YYG+C  NG Y+V LHFAEIV+ +D  +SS 
Sbjct: 483 DYIARNTSELTLDHPELYTEARLSPLSLKYYGVCMENGEYSVELHFAEIVFTEDHTFSSN 542

Query: 391 GKRIFDIYVQGERVKKDFNVKAEANGPKKTVTRNFTANVTNNLLHIQFYWAGK 549
           GKRIFD+++QG +V KDFN++ EA G  + +T+ FT N+T+N L I FYWAGK
Sbjct: 543 GKRIFDVFIQGTKVLKDFNIQDEAGGVHRVITKTFTTNITDNTLEIHFYWAGK 595


>gb|EEE56614.1| hypothetical protein OsJ_05994 [Oryza sativa Japonica Group]
          Length = 1252

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/173 (49%), Positives = 119/173 (68%), Gaps = 4/173 (2%)
 Frame = +1

Query: 43  KSNYSSLYINCGGEGTHINGDDYDEDSS---TLPFKVSQKGNWAYTSSGDFITSIANPRN 213
           K  YSSL+INCGG+   +NG+ Y++DSS   T  F +S    WAY+S+GDF+    NP  
Sbjct: 426 KPRYSSLFINCGGKSVEVNGNIYEDDSSRIGTSTFVLSNDRKWAYSSTGDFV---GNPDA 482

Query: 214 NTV-HSTCGISVPAAPLYSTARISALSLDYYGLCFRNGIYNVTLHFAEIVYADDDDYSSL 390
           + +  +T  +++    LY+ AR+S LSL YYG+C  NG Y+V LHFAEIV+ +D  +SS 
Sbjct: 483 DYIARNTSELTLDHPELYTEARLSPLSLKYYGVCMENGEYSVELHFAEIVFTEDHTFSSN 542

Query: 391 GKRIFDIYVQGERVKKDFNVKAEANGPKKTVTRNFTANVTNNLLHIQFYWAGK 549
           GKRIFD+++QG +V KDFN++ EA G  + +T+ FT N+T+N L I FYWAGK
Sbjct: 543 GKRIFDVFIQGTKVLKDFNIQDEAGGVHRVITKTFTTNITDNTLEIHFYWAGK 595


>gb|EEC72788.1| hypothetical protein OsI_06468 [Oryza sativa Indica Group]
          Length = 1034

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/173 (49%), Positives = 119/173 (68%), Gaps = 4/173 (2%)
 Frame = +1

Query: 43  KSNYSSLYINCGGEGTHINGDDYDEDSS---TLPFKVSQKGNWAYTSSGDFITSIANPRN 213
           K  YSSL+INCGG+   +NG+ Y++DSS   T  F +S    WAY+S+GDF+    NP  
Sbjct: 426 KPRYSSLFINCGGKSVEVNGNIYEDDSSRIGTSTFVLSNDRKWAYSSTGDFV---GNPDA 482

Query: 214 NTV-HSTCGISVPAAPLYSTARISALSLDYYGLCFRNGIYNVTLHFAEIVYADDDDYSSL 390
           + +  +T  +++    LY+ AR+S LSL YYG+C  NG Y+V LHFAEIV+ +D  +SS 
Sbjct: 483 DYIARNTSELTLDHPELYTEARLSPLSLKYYGVCMENGEYSVELHFAEIVFTEDHTFSSN 542

Query: 391 GKRIFDIYVQGERVKKDFNVKAEANGPKKTVTRNFTANVTNNLLHIQFYWAGK 549
           GKRIFD+++QG +V KDFN++ EA G  + +T+ FT N+T+N L I FYWAGK
Sbjct: 543 GKRIFDVFIQGTKVLKDFNIQDEAGGVHRVITKTFTTNITDNTLEIHFYWAGK 595


>ref|XP_003571148.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Brachypodium distachyon]
          Length = 777

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/168 (48%), Positives = 109/168 (64%), Gaps = 3/168 (1%)
 Frame = +1

Query: 55  SSLYINCGGEGTHINGDDYDEDSS---TLPFKVSQKGNWAYTSSGDFITSIANPRNNTVH 225
           SSL+INCGG    I+G+ Y++DSS   T  F  S    WAY+S+GDF+ +     +    
Sbjct: 174 SSLFINCGGRSVVIDGNVYEDDSSQIGTSTFVSSDDRKWAYSSTGDFVGN--ENADYIAR 231

Query: 226 STCGISVPAAPLYSTARISALSLDYYGLCFRNGIYNVTLHFAEIVYADDDDYSSLGKRIF 405
           +T  +++    LY+ AR+S LSL YYGLC  NG Y V LHFAEIV+ +D  YSS GKRIF
Sbjct: 232 NTTKLALAHYELYTEARLSPLSLKYYGLCMENGEYLVQLHFAEIVFTEDHTYSSNGKRIF 291

Query: 406 DIYVQGERVKKDFNVKAEANGPKKTVTRNFTANVTNNLLHIQFYWAGK 549
           ++ +QG +V KDFN++ EA G  + +T NFT N+T N L I FYW GK
Sbjct: 292 EVLIQGAKVLKDFNIQDEAGGVHRAITMNFTTNITENTLEIHFYWGGK 339


Top