BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006055
         (2095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-...   372   e-100
ref|XP_002525006.1| RNA-binding protein with multiple splicing, ...   370   e-100
ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotei...   367   7e-99
ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817...   361   5e-97
gb|AFK46375.1| unknown [Medicago truncatula]                          360   6e-97

>ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
          Length = 328

 Score =  372 bits (954), Expect = e-100
 Identities = 198/328 (60%), Positives = 220/328 (67%), Gaps = 13/328 (3%)
 Frame = -3

Query: 2039 MAGTGIHPFHHQWXXXXXXXXXXXXXXXXXXXT-------------DELRTIFISGLPGD 1899
            MAG GIHP+H QW                                 DE+RTIFISGLP D
Sbjct: 1    MAGAGIHPYHQQWPPAPAPQPSAPGAPPAPAHPPPILVENPNRPNSDEVRTIFISGLPED 60

Query: 1898 VKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDALQDMVFDAESKAVL 1719
            VKERELQNLLRWLPGYEASQVNFK E PMGFALFS+   A+AA+DALQ+MVFDAESK+VL
Sbjct: 61   VKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQEMVFDAESKSVL 120

Query: 1718 HTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXXXXXXPVWGHQXXXX 1539
            HTEMAKKNLFVKRG+VAD ++ DQSKRLRTGGDYTHTG            PVWG      
Sbjct: 121  HTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSSPSPFHPPPAPVWGPHGYMA 180

Query: 1538 XXXXXXXXXXXXXXXXXXXXXXXXXXXPSGYAPVQNSKDNPPCNTLFIGNLGENVIEEEL 1359
                                       PS Y PVQN+KDNPPCNTLFIGNLGEN+ EEEL
Sbjct: 181  PAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINEEEL 240

Query: 1358 RNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVIPSSGRGGMRIQYSK 1179
            R LFS QPGFKQMK+LRQER+TVCFIEF+DM++AT VH +LQGAVIPSSG  GMRIQYSK
Sbjct: 241  RGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVIPSSGSVGMRIQYSK 300

Query: 1178 NPFGRRKDGFNTAGGPEANGAPLQTTFK 1095
            NPFG+RKD  +      ANGAP   T++
Sbjct: 301  NPFGKRKDSGHPVAVAGANGAPAPPTYQ 328


>ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
            communis] gi|223535714|gb|EEF37378.1| RNA-binding protein
            with multiple splicing, putative [Ricinus communis]
          Length = 337

 Score =  370 bits (951), Expect = e-100
 Identities = 197/337 (58%), Positives = 226/337 (67%), Gaps = 22/337 (6%)
 Frame = -3

Query: 2039 MAGTGIHPFHHQ-WXXXXXXXXXXXXXXXXXXXT---------------------DELRT 1926
            MAG GIHP+HHQ W                                         DE+RT
Sbjct: 1    MAGAGIHPYHHQQWPPAAAPPPPPAAAGGAAPPPPSAVHHPPTVLVDNSNRGPTHDEVRT 60

Query: 1925 IFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDALQDMV 1746
            IFI+GLP DVKERELQNLLRWLPGYEASQVN+K E PMGFALFS+S FAIAA++ALQDM+
Sbjct: 61   IFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTSQFAIAAKEALQDML 120

Query: 1745 FDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXXXXXXP 1566
            FDAESK++LHTEMAKKNLFVKRG+VAD N+ DQSKRLRTGGDY+HT             P
Sbjct: 121  FDAESKSILHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTAYTTPSPFHPPPAP 180

Query: 1565 VWGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSGYAPVQNSKDNPPCNTLFIGNL 1386
            VWG                                 PS Y PVQN+KDNPPCNTLFIGNL
Sbjct: 181  VWGPHGYMAPAPPPYDPYAGYPVPQVPMPAPAPMPAPSSYLPVQNTKDNPPCNTLFIGNL 240

Query: 1385 GENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVIPSSGR 1206
            GEN+ E+ELR LFS QPGFKQMK+LRQER+TVCFIEF+D++SA+ VH++LQGAVIPSSG 
Sbjct: 241  GENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDVNSASNVHRSLQGAVIPSSGS 300

Query: 1205 GGMRIQYSKNPFGRRKDGFNTAGGPEANGAPLQTTFK 1095
             GMRIQYSKNPFG+RKDG ++   P ANGAP   T++
Sbjct: 301  VGMRIQYSKNPFGKRKDGSHSVASPSANGAPPAMTYQ 337


>ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
            sativus] gi|449515829|ref|XP_004164950.1| PREDICTED: U1
            small nuclear ribonucleoprotein A-like [Cucumis sativus]
          Length = 335

 Score =  367 bits (942), Expect = 7e-99
 Identities = 196/329 (59%), Positives = 216/329 (65%), Gaps = 20/329 (6%)
 Frame = -3

Query: 2039 MAGTGIHPFHHQWXXXXXXXXXXXXXXXXXXXT--------------------DELRTIF 1920
            MAGTGIHP+H QW                                        DE+RTIF
Sbjct: 1    MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIF 60

Query: 1919 ISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDALQDMVFD 1740
            I+GLP DVKERELQNLLRWLPGYEASQVNFK E PMGFALFS++ FAIAA+DALQDMVFD
Sbjct: 61   ITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFD 120

Query: 1739 AESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXXXXXXPVW 1560
            AESK+VLHTEMAKKNLFVKRG+VAD +  DQSKRLRTGGDY HTG            P+W
Sbjct: 121  AESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIW 180

Query: 1559 GHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSGYAPVQNSKDNPPCNTLFIGNLGE 1380
            G                                 PS Y PVQN+KDNPPCNTLFIGNLGE
Sbjct: 181  GPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE 240

Query: 1379 NVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVIPSSGRGG 1200
            NV EEELR LFS QPGFKQMK+LRQER+TVCFIEF+D+++AT VH +LQGAVIPSSG  G
Sbjct: 241  NVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG 300

Query: 1199 MRIQYSKNPFGRRKDGFNTAGGPEANGAP 1113
            MRIQ+SKNPFG+RKD       P  NG P
Sbjct: 301  MRIQFSKNPFGKRKDAAYPVSAPGVNGTP 329


>ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817421 [Glycine max]
          Length = 318

 Score =  361 bits (926), Expect = 5e-97
 Identities = 192/319 (60%), Positives = 218/319 (68%), Gaps = 4/319 (1%)
 Frame = -3

Query: 2039 MAGTGIHPFHHQWXXXXXXXXXXXXXXXXXXXT---DELRTIFISGLPGDVKERELQNLL 1869
            MAGTGIHP+H QW                       +E+RTIFI+GLP DVKERELQNLL
Sbjct: 1    MAGTGIHPYHQQWAPAAAAPPPPPPAAAGGPPPHPGEEVRTIFITGLPEDVKERELQNLL 60

Query: 1868 RWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDALQDMVFDAESKAVLHTEMAKKNLF 1689
            RWLPG+EASQ+NFK E PMGFALFS+ H A+ A+D LQDM+FD ++K+VLHTEMAKKNLF
Sbjct: 61   RWLPGFEASQLNFKAEKPMGFALFSAPHQALTAKDILQDMLFDPDTKSVLHTEMAKKNLF 120

Query: 1688 VKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXXXXXXPVWG-HQXXXXXXXXXXXXX 1512
            VKRG+ AD  + DQSKRLRT GDYTHTG            PVWG H              
Sbjct: 121  VKRGIGADAGAFDQSKRLRTAGDYTHTGYTSPSPFHPPPPPVWGPHGYMAPPPPPPYDPY 180

Query: 1511 XXXXXXXXXXXXXXXXXXPSGYAPVQNSKDNPPCNTLFIGNLGENVIEEELRNLFSGQPG 1332
                              PS Y PVQN+KDNPPCNTLFIGNLGEN+ EEE+R LFS QPG
Sbjct: 181  AGYPVAPVPMPTPAPIAAPSTYVPVQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPG 240

Query: 1331 FKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVIPSSGRGGMRIQYSKNPFGRRKDG 1152
            FKQMK+LRQER+TVCFIEF+D++SAT VH NLQGAVIPSSG  GMRIQYSKNPFG+RKD 
Sbjct: 241  FKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDN 300

Query: 1151 FNTAGGPEANGAPLQTTFK 1095
               A  P ANGAP   T++
Sbjct: 301  LPVA-VPSANGAPPTMTYQ 318


>gb|AFK46375.1| unknown [Medicago truncatula]
          Length = 314

 Score =  360 bits (925), Expect = 6e-97
 Identities = 187/315 (59%), Positives = 215/315 (68%)
 Frame = -3

Query: 2039 MAGTGIHPFHHQWXXXXXXXXXXXXXXXXXXXTDELRTIFISGLPGDVKERELQNLLRWL 1860
            MA  GIHP+H QW                    +E+RTIFI+GLP DVKERELQNL RWL
Sbjct: 1    MAANGIHPYHQQWPPAAAPPPPQPTAIPSPSS-EEVRTIFITGLPEDVKERELQNLCRWL 59

Query: 1859 PGYEASQVNFKVEPPMGFALFSSSHFAIAARDALQDMVFDAESKAVLHTEMAKKNLFVKR 1680
            PG+EASQ+NFK E PMGFALF+S H AIAA+D LQDM+FD E+K+VLHTEMAKKNLFVKR
Sbjct: 60   PGFEASQLNFKAEKPMGFALFNSPHQAIAAKDILQDMLFDPEAKSVLHTEMAKKNLFVKR 119

Query: 1679 GVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXXXXXXPVWGHQXXXXXXXXXXXXXXXXX 1500
            G+ AD  + DQSKRLRT GDY HTG            PVWG                   
Sbjct: 120  GIGADAVAFDQSKRLRTAGDYNHTGYVTPSPFHPPPPPVWGPHGYMAPPPPPPYDPYAGY 179

Query: 1499 XXXXXXXXXXXXXXPSGYAPVQNSKDNPPCNTLFIGNLGENVIEEELRNLFSGQPGFKQM 1320
                          PS Y P+QN+KDNPPCNTLFIGNLGEN+ EEE+R LFS QPGFKQM
Sbjct: 180  PVAQVPMPAPVSIAPSSYVPIQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQM 239

Query: 1319 KLLRQERNTVCFIEFDDMSSATMVHQNLQGAVIPSSGRGGMRIQYSKNPFGRRKDGFNTA 1140
            K++RQER+TVCFIEF+D++SAT VH NLQGAVIPSSG  GMRIQYSKNPFG+R+DG    
Sbjct: 240  KIIRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKREDGTYPM 299

Query: 1139 GGPEANGAPLQTTFK 1095
              P ANGAP+  T++
Sbjct: 300  AVPGANGAPVAMTYQ 314