BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006051
         (2605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1219   0.0  
ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|2...  1184   0.0  
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...  1178   0.0  
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1166   0.0  
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1139   0.0  

>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score = 1219 bits (3154), Expect = 0.0
 Identities = 581/688 (84%), Positives = 628/688 (91%), Gaps = 3/688 (0%)
 Frame = +3

Query: 288  AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 467
            A FSSVTEKDILKA+  LVEPN+DEA AV+ARQEIDLKVGVAFTRFQTSYFQGKYGNLDS
Sbjct: 173  ARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 232

Query: 468  KVISYGPCQTPTLGFCVQRYLQITAFKPEKFWSLHPHLMKPGYELRLEWDRNKLFEFKIA 647
            +VISYGPCQTPTLGFCVQRYLQI  FKPEKFW+LHP++   GYEL+LEW+RNKLF+  +A
Sbjct: 233  RVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALHPYITHNGYELQLEWERNKLFDLDVA 292

Query: 648  AMFQKLVVEDGIVEVSDISVKEESKKRPSGLNTVNLLKIASSALGFGPQLAMQLAERLYT 827
             MFQ LV+EDGIVEV+DIS K+ESK RPSGLNTVNLLK+ASSALGFGPQ+AMQLAERLYT
Sbjct: 293  VMFQNLVMEDGIVEVTDISEKQESKSRPSGLNTVNLLKVASSALGFGPQMAMQLAERLYT 352

Query: 828  QGFISYPRTESTAYPLSFDFKSTLEAQRNNAAWGDYVRDLLATGFLQPRVGTDAGDHPPI 1007
            QGFISYPRTESTAYP SFDFKSTL  Q NN  WGDYV+ LL  GF +PR GTDAGDHPPI
Sbjct: 353  QGFISYPRTESTAYPSSFDFKSTLGMQTNNPTWGDYVQKLLDDGFHRPRSGTDAGDHPPI 412

Query: 1008 TPMRSATEDMLGNDAWRLYQYICQHFIGTVSPDCKYLRTKVEFSTGGEVFYYTGQRVISK 1187
            TPMR+A EDMLGNDAW+LYQY+CQHFIGTVSPDCKY+R KVEFS GGE+F   GQ VI K
Sbjct: 413  TPMRAANEDMLGNDAWKLYQYVCQHFIGTVSPDCKYVRNKVEFSIGGEIFRCIGQHVIVK 472

Query: 1188 GFTCIMPWLAVDEKNLPQFAKGEKMKISKVELYEGNTSPPDYLSESELISLMEKNGIGTD 1367
            GFT IMPWLAV+EKNLPQF KGEK+++SKVELYEG TSPPDYLSESELISLMEKNGIGTD
Sbjct: 473  GFTSIMPWLAVNEKNLPQFKKGEKIEVSKVELYEGETSPPDYLSESELISLMEKNGIGTD 532

Query: 1368 ASIPVHINNICERNFVQVHAGRRLVPTTLGITLIRGYQTIDPDLCLPDIRSFIEQQITLI 1547
            ASIPVHINNICERNFVQV AGR+LVPT LGI+LIRGYQ IDPDLCLPDIRSFIEQQITL+
Sbjct: 533  ASIPVHINNICERNFVQVQAGRKLVPTALGISLIRGYQCIDPDLCLPDIRSFIEQQITLV 592

Query: 1548 AKGQANHSCVVEHVLQQFRQKYSYFVKQIENMDALFEAQFSPLADSGRLLSKCGKCTRYM 1727
            AKGQ +HS VVEHVLQQF+QK+ YFVKQIENMDALFEAQFSPLADSGR LSKCGKC RYM
Sbjct: 593  AKGQVDHSRVVEHVLQQFKQKFIYFVKQIENMDALFEAQFSPLADSGRALSKCGKCLRYM 652

Query: 1728 KYISVQPSRLYCGTCEEVYNLPQKGTIKLYKELVCPLDNFELLIFSMAGPEGKSFPLCPY 1907
            KYIS QPSR+YCGTCEEVY LPQKGTIKLYKEL CPLDNFELLIFS+AGPEGKSFPLCPY
Sbjct: 653  KYISTQPSRMYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFSLAGPEGKSFPLCPY 712

Query: 1908 CYNNPPFEGIDMLFSNNKTSSS---GKGAGMPCFMCPHPTCQHSVIAQGVCACPECDGTL 2078
            CYN+PPFEGID LF   KTSS+   GKGAGMPCF+CPHPTC HS+IAQGVCACPEC GTL
Sbjct: 713  CYNSPPFEGIDTLFGATKTSSTGKLGKGAGMPCFLCPHPTCPHSLIAQGVCACPECSGTL 772

Query: 2079 VLDPVSGPKWRLYCNMCNCLVFLPQGAHRISTTRDRCVECDSTILEVDFNKKTTPLSDGA 2258
            VLDPVS PKWRLYCNMCNCLV+LPQGAH+ISTTRDRC EC+STILEVDFNKKTTPL DG+
Sbjct: 773  VLDPVSAPKWRLYCNMCNCLVYLPQGAHKISTTRDRCPECESTILEVDFNKKTTPLLDGS 832

Query: 2259 TLHSGCILCDDLLHSLVEMKHGKSFYKR 2342
            TL++GCILCD+LLHSLVEMKHGKSF+KR
Sbjct: 833  TLYTGCILCDELLHSLVEMKHGKSFFKR 860



 Score =  119 bits (298), Expect = 4e-24
 Identities = 54/66 (81%), Positives = 57/66 (86%)
 Frame = +1

Query: 1   FNAPTLKSESNPKAHIGRHLSQEARGCGHLVLWLDCDREGENICFEVIECTGFIGKADGR 180
           F AP LK+ESNPKAHI RHLSQEAR CGHLVLWLDCDREGENICFEV+ECTGF G    R
Sbjct: 109 FQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCDREGENICFEVVECTGFHGNEARR 168

Query: 181 RIYRAR 198
           R+YRAR
Sbjct: 169 RVYRAR 174


>ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|222861878|gb|EEE99420.1|
            predicted protein [Populus trichocarpa]
          Length = 837

 Score = 1184 bits (3063), Expect = 0.0
 Identities = 563/688 (81%), Positives = 619/688 (89%), Gaps = 3/688 (0%)
 Frame = +3

Query: 288  AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 467
            A FSSVTEKDILKA+  LVEPN+ EALAV+ARQEIDLKVGVAFTRFQTS+FQGKYGNLDS
Sbjct: 118  ARFSSVTEKDILKAMNCLVEPNEYEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDS 177

Query: 468  KVISYGPCQTPTLGFCVQRYLQITAFKPEKFWSLHPHLMKPGYELRLEWDRNKLFEFKIA 647
            +VISYGPCQTPTLGFCVQRYLQIT FKPEKFW+L PH+M  GYEL+LEW+R+KLF+  +A
Sbjct: 178  RVISYGPCQTPTLGFCVQRYLQITTFKPEKFWALRPHVMVDGYELQLEWERHKLFDLDVA 237

Query: 648  AMFQKLVVEDGIVEVSDISVKEESKKRPSGLNTVNLLKIASSALGFGPQLAMQLAERLYT 827
             MFQKLV++D I+EV+D+S K+ESK RP GLNTVNLLKIASSALGFGPQ+ MQLAERLY 
Sbjct: 238  LMFQKLVLQDRILEVTDMSEKQESKGRPPGLNTVNLLKIASSALGFGPQVTMQLAERLYI 297

Query: 828  QGFISYPRTESTAYPLSFDFKSTLEAQRNNAAWGDYVRDLLATGFLQPRVGTDAGDHPPI 1007
            QGFISYPRTESTAYP SFDFK TL A  NN  WGDYV+ LL+ G+ +P+ G DAGDHPPI
Sbjct: 298  QGFISYPRTESTAYPSSFDFKGTLGALANNPMWGDYVQGLLSGGYHKPQSGKDAGDHPPI 357

Query: 1008 TPMRSATEDMLGNDAWRLYQYICQHFIGTVSPDCKYLRTKVEFSTGGEVFYYTGQRVISK 1187
            TPMRSA EDMLG DAWRLYQY+CQHF+GTVSPDCKY RTKVEFS GGE F+  G  V  K
Sbjct: 358  TPMRSANEDMLGRDAWRLYQYVCQHFLGTVSPDCKYTRTKVEFSIGGEFFHCIGLHVTVK 417

Query: 1188 GFTCIMPWLAVDEKNLPQFAKGEKMKISKVELYEGNTSPPDYLSESELISLMEKNGIGTD 1367
            GFT IMPWLAV EKNLPQFAKG+K+++SKVEL+EG T PPDYLSESELISLMEKNGIGTD
Sbjct: 418  GFTSIMPWLAVSEKNLPQFAKGDKIEVSKVELFEGQTVPPDYLSESELISLMEKNGIGTD 477

Query: 1368 ASIPVHINNICERNFVQVHAGRRLVPTTLGITLIRGYQTIDPDLCLPDIRSFIEQQITLI 1547
            ASI VHINNICERN+VQV AGR+LVPT LGITLIRGYQ IDPDLCLPDIR FIEQQITL+
Sbjct: 478  ASISVHINNICERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRGFIEQQITLV 537

Query: 1548 AKGQANHSCVVEHVLQQFRQKYSYFVKQIENMDALFEAQFSPLADSGRLLSKCGKCTRYM 1727
            AKG+A+HSCVV+HVL+QF++KYSYFVKQI+NMDALFEAQFSPLADSGR  SKCGKC RYM
Sbjct: 538  AKGEADHSCVVQHVLEQFKRKYSYFVKQIDNMDALFEAQFSPLADSGRAFSKCGKCLRYM 597

Query: 1728 KYISVQPSRLYCGTCEEVYNLPQKGTIKLYKELVCPLDNFELLIFSMAGPEGKSFPLCPY 1907
            KYIS QPSRLYCGTCEEVY LPQKGTIKLYKEL CPLDNFELLIF+MAGPEGKSFPLCP 
Sbjct: 598  KYISSQPSRLYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFAMAGPEGKSFPLCPL 657

Query: 1908 CYNNPPFEGIDMLFSNNKTSSS---GKGAGMPCFMCPHPTCQHSVIAQGVCACPECDGTL 2078
            CYN+PPFEGID LF  +KT SS   GKGAGMPCF+CPHPTC+HS+IAQGVCACPEC+GTL
Sbjct: 658  CYNSPPFEGIDALFGASKTGSSGMLGKGAGMPCFLCPHPTCRHSLIAQGVCACPECNGTL 717

Query: 2079 VLDPVSGPKWRLYCNMCNCLVFLPQGAHRISTTRDRCVECDSTILEVDFNKKTTPLSDGA 2258
            VLDP+S PKWRLYCNMCNCLV LPQGAHRISTTR++C ECDSTI+EVDFNK TTPL DGA
Sbjct: 718  VLDPISAPKWRLYCNMCNCLVLLPQGAHRISTTREQCPECDSTIIEVDFNKNTTPLEDGA 777

Query: 2259 TLHSGCILCDDLLHSLVEMKHGKSFYKR 2342
            TLH GCILCD+LLHSLVE+KHGKSF+KR
Sbjct: 778  TLHVGCILCDNLLHSLVEVKHGKSFFKR 805



 Score =  114 bits (284), Expect = 2e-22
 Identities = 51/66 (77%), Positives = 56/66 (84%)
 Frame = +1

Query: 1   FNAPTLKSESNPKAHIGRHLSQEARGCGHLVLWLDCDREGENICFEVIECTGFIGKADGR 180
           F AP  K+E+NPKAHI RHLSQEARGC HLVLWLDCDREGENICFEVI+CTGF    D R
Sbjct: 54  FQAPIHKAEANPKAHICRHLSQEARGCNHLVLWLDCDREGENICFEVIQCTGFQANDDRR 113

Query: 181 RIYRAR 198
           ++YRAR
Sbjct: 114 KVYRAR 119


>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223544485|gb|EEF46004.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 865

 Score = 1178 bits (3047), Expect = 0.0
 Identities = 558/688 (81%), Positives = 616/688 (89%), Gaps = 3/688 (0%)
 Frame = +3

Query: 288  AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 467
            A FSSV EKDILKA+  LV+PN+DEALAV+ARQEIDLKVGVAFTRFQTS+FQGKYGNLDS
Sbjct: 145  ARFSSVAEKDILKAMDNLVQPNRDEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDS 204

Query: 468  KVISYGPCQTPTLGFCVQRYLQITAFKPEKFWSLHPHLMKPGYELRLEWDRNKLFEFKIA 647
            +VISYGPCQTPTLGFCVQRYLQI  FKPEKFWSL PHL+  GY+L+LEW+R++LF+  +A
Sbjct: 205  RVISYGPCQTPTLGFCVQRYLQIATFKPEKFWSLRPHLIIDGYQLQLEWERHRLFDLDVA 264

Query: 648  AMFQKLVVEDGIVEVSDISVKEESKKRPSGLNTVNLLKIASSALGFGPQLAMQLAERLYT 827
             MFQK V++DGI+EV DIS K+E+K RPSGLNTVNLLK+ASSALGFGPQ+AMQLAERLYT
Sbjct: 265  LMFQKQVLQDGILEVIDISQKQETKGRPSGLNTVNLLKVASSALGFGPQMAMQLAERLYT 324

Query: 828  QGFISYPRTESTAYPLSFDFKSTLEAQRNNAAWGDYVRDLLATGFLQPRVGTDAGDHPPI 1007
            QGFISYPRTESTAYP SFDFKS L    NN+ WGD VR LL  G+ +PR+GTDAGDHPPI
Sbjct: 325  QGFISYPRTESTAYPSSFDFKSILSTLLNNSIWGDSVRRLLVEGYHKPRLGTDAGDHPPI 384

Query: 1008 TPMRSATEDMLGNDAWRLYQYICQHFIGTVSPDCKYLRTKVEFSTGGEVFYYTGQRVISK 1187
            TP+R ATEDMLG DAWRLYQY+CQHFIG+VSPDCKY+RTKVEFS GGE F+  GQ VI +
Sbjct: 385  TPIRLATEDMLGKDAWRLYQYVCQHFIGSVSPDCKYVRTKVEFSVGGEFFHCIGQHVIVE 444

Query: 1188 GFTCIMPWLAVDEKNLPQFAKGEKMKISKVELYEGNTSPPDYLSESELISLMEKNGIGTD 1367
            GFT IMPWLAV EKNLPQ  KGEK+++ ++EL EG T+PPDYL+ESELISLMEKNGIGTD
Sbjct: 445  GFTSIMPWLAVTEKNLPQLVKGEKIEVLRMELLEGKTTPPDYLTESELISLMEKNGIGTD 504

Query: 1368 ASIPVHINNICERNFVQVHAGRRLVPTTLGITLIRGYQTIDPDLCLPDIRSFIEQQITLI 1547
            ASIPVHINNICERN+VQV AGRRL PT LGITLIRGYQ IDPDLCLPDIRSFIEQQITL+
Sbjct: 505  ASIPVHINNICERNYVQVQAGRRLAPTILGITLIRGYQCIDPDLCLPDIRSFIEQQITLV 564

Query: 1548 AKGQANHSCVVEHVLQQFRQKYSYFVKQIENMDALFEAQFSPLADSGRLLSKCGKCTRYM 1727
            AKGQA+HS VV+HVLQQF+QK++YFVKQI+NMDALFEAQFS L DSGR LSKCGKC RYM
Sbjct: 565  AKGQADHSRVVQHVLQQFKQKFTYFVKQIDNMDALFEAQFSQLVDSGRALSKCGKCLRYM 624

Query: 1728 KYISVQPSRLYCGTCEEVYNLPQKGTIKLYKELVCPLDNFELLIFSMAGPEGKSFPLCPY 1907
            KYIS QP RLYCGTCEEVY LPQKGTIKLYKEL CPLDNFELLIFSMAGPEGK+FPLCPY
Sbjct: 625  KYISTQPPRLYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFSMAGPEGKTFPLCPY 684

Query: 1908 CYNNPPFEGIDMLFSNNKTSS---SGKGAGMPCFMCPHPTCQHSVIAQGVCACPECDGTL 2078
            CYNNPPFEG+D LF  +K  +    GKGAGMPCF+CPHPTC+HS+IAQGVCACPEC GTL
Sbjct: 685  CYNNPPFEGVDTLFGASKNGNFGKLGKGAGMPCFLCPHPTCRHSLIAQGVCACPECSGTL 744

Query: 2079 VLDPVSGPKWRLYCNMCNCLVFLPQGAHRISTTRDRCVECDSTILEVDFNKKTTPLSDGA 2258
            VLDPVS PKWRLYCNMCNCLV LPQGAHRI+TTR+RC ECDSTI+EVDFNK TTPL DGA
Sbjct: 745  VLDPVSAPKWRLYCNMCNCLVLLPQGAHRIATTRERCPECDSTIIEVDFNKNTTPLEDGA 804

Query: 2259 TLHSGCILCDDLLHSLVEMKHGKSFYKR 2342
            TLH GCILCDDLLHSLVE+KHGKSF+KR
Sbjct: 805  TLHIGCILCDDLLHSLVEVKHGKSFFKR 832



 Score =  116 bits (290), Expect = 3e-23
 Identities = 53/66 (80%), Positives = 56/66 (84%)
 Frame = +1

Query: 1   FNAPTLKSESNPKAHIGRHLSQEARGCGHLVLWLDCDREGENICFEVIECTGFIGKADGR 180
           F AP +K+ESNPK HI RHLSQEARGCGHLVLWLDCDREGENICFEVIECTGF      R
Sbjct: 81  FQAPIVKAESNPKVHIRRHLSQEARGCGHLVLWLDCDREGENICFEVIECTGFHLNDSRR 140

Query: 181 RIYRAR 198
           R+YRAR
Sbjct: 141 RVYRAR 146


>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
          Length = 863

 Score = 1166 bits (3017), Expect = 0.0
 Identities = 546/685 (79%), Positives = 617/685 (90%), Gaps = 3/685 (0%)
 Frame = +3

Query: 288  AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 467
            A FSSVTEKD++KAL  LV PN+DEALAV+ARQEIDLKVGVAFTRFQTSYFQGKYGNLDS
Sbjct: 143  ARFSSVTEKDVVKALDNLVRPNRDEALAVDARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 202

Query: 468  KVISYGPCQTPTLGFCVQRYLQITAFKPEKFWSLHPHLMKPGYELRLEWDRNKLFEFKIA 647
            +VISYGPCQTPTLGFCVQRYLQI  FKPEKFWSLHP++++ GYE++LEW R KLF+  +A
Sbjct: 203  RVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSLHPYIIQNGYEIQLEWQRGKLFDINVA 262

Query: 648  AMFQKLVVEDGIVEVSDISVKEESKKRPSGLNTVNLLKIASSALGFGPQLAMQLAERLYT 827
             MFQKLV EDG++EV++IS K+E+K RP GLNTVNLLK+ASSALGFGPQ+AMQLAERLYT
Sbjct: 263  MMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTVNLLKVASSALGFGPQMAMQLAERLYT 322

Query: 828  QGFISYPRTESTAYPLSFDFKSTLEAQRNNAAWGDYVRDLLATGFLQPRVGTDAGDHPPI 1007
            QGFISYPRTESTAYP SFDF+  L AQ NN  WG+YV+ LL  G+ +PR+GTD GDHPPI
Sbjct: 323  QGFISYPRTESTAYPPSFDFRGVLSAQTNNPTWGNYVQGLLTNGYQKPRLGTDVGDHPPI 382

Query: 1008 TPMRSATEDMLGNDAWRLYQYICQHFIGTVSPDCKYLRTKVEFSTGGEVFYYTGQRVISK 1187
            TPMRSA EDMLGNDAW+LYQYICQHFIGTVSPDCKY+R KVEFS GGE F+ TGQ V++K
Sbjct: 383  TPMRSAAEDMLGNDAWKLYQYICQHFIGTVSPDCKYIRRKVEFSIGGESFHCTGQHVVTK 442

Query: 1188 GFTCIMPWLAVDEKNLPQFAKGEKMKISKVELYEGNTSPPDYLSESELISLMEKNGIGTD 1367
            GFT IMPWLA+++KN+P F KG+K+++SK+ELYEG+TSPPD+L+ESELISLMEKNGIGTD
Sbjct: 443  GFTAIMPWLAINDKNIPSFIKGQKIEVSKLELYEGSTSPPDFLTESELISLMEKNGIGTD 502

Query: 1368 ASIPVHINNICERNFVQVHAGRRLVPTTLGITLIRGYQTIDPDLCLPDIRSFIEQQITLI 1547
            ASIPVHINNICERN+VQV AGR+LVPTTLGITL+RGYQTIDPDLCLPDIRSFIEQQITLI
Sbjct: 503  ASIPVHINNICERNYVQVQAGRKLVPTTLGITLVRGYQTIDPDLCLPDIRSFIEQQITLI 562

Query: 1548 AKGQANHSCVVEHVLQQFRQKYSYFVKQIENMDALFEAQFSPLADSGRLLSKCGKCTRYM 1727
            AKGQ +H  VV+HV+QQF QK+SYFVK+IE+MDALFEAQFS L DSGR+LSKCGKC RYM
Sbjct: 563  AKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDALFEAQFSTLTDSGRILSKCGKCLRYM 622

Query: 1728 KYISVQPSRLYCGTCEEVYNLPQKGTIKLYKELVCPLDNFELLIFSMAGPEGKSFPLCPY 1907
            K+IS QPSRLYCGTCEEVY LPQKGTIKLYKEL CPLDNFELLI SM GP+GKSFPLCPY
Sbjct: 623  KFISTQPSRLYCGTCEEVYYLPQKGTIKLYKELSCPLDNFELLICSMPGPDGKSFPLCPY 682

Query: 1908 CYNNPPFEGIDMLFSNNKTSSS---GKGAGMPCFMCPHPTCQHSVIAQGVCACPECDGTL 2078
            CY NPPFEGI+ L +  KT +S   GKGAGMPC +CPHPTC +S+++QGVCACPEC GTL
Sbjct: 683  CYINPPFEGIETLINTAKTGTSGKIGKGAGMPCNLCPHPTCPNSLVSQGVCACPECSGTL 742

Query: 2079 VLDPVSGPKWRLYCNMCNCLVFLPQGAHRISTTRDRCVECDSTILEVDFNKKTTPLSDGA 2258
            VLDPVS P+W+L CNMCNCLVFL QGAHRISTT+DRC ECDS+I+EVDFNKKTTPL DGA
Sbjct: 743  VLDPVSAPRWKLCCNMCNCLVFLAQGAHRISTTKDRCPECDSSIIEVDFNKKTTPLEDGA 802

Query: 2259 TLHSGCILCDDLLHSLVEMKHGKSF 2333
            TLH GCILCD+LLHSLVEMKHG+SF
Sbjct: 803  TLHHGCILCDELLHSLVEMKHGRSF 827



 Score = 95.5 bits (236), Expect = 6e-17
 Identities = 43/53 (81%), Positives = 47/53 (88%)
 Frame = +1

Query: 1   FNAPTLKSESNPKAHIGRHLSQEARGCGHLVLWLDCDREGENICFEVIECTGF 159
           F A  +K+ESNPKAHI RHLSQEARGC +LVLWLDCDREGENICFEVI+ TGF
Sbjct: 83  FQAQVIKNESNPKAHICRHLSQEARGCRYLVLWLDCDREGENICFEVIKSTGF 135


>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 864

 Score = 1139 bits (2946), Expect = 0.0
 Identities = 538/688 (78%), Positives = 608/688 (88%), Gaps = 4/688 (0%)
 Frame = +3

Query: 288  AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 467
            A FSSVTEKDILKAL  LVEPN++EALAV+ARQEIDLKVGVAFTRFQT++FQGKYGNLDS
Sbjct: 142  ARFSSVTEKDILKALDNLVEPNRNEALAVDARQEIDLKVGVAFTRFQTTFFQGKYGNLDS 201

Query: 468  KVISYGPCQTPTLGFCVQRYLQITAFKPEKFWSLHPHLMKPGYELRLEWDRNKLFEFKIA 647
            ++ISYGPCQTPTLGFCVQR+LQIT FKPEKFWS+ P++++ GYEL L+W+R KLF+  + 
Sbjct: 202  RLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCPYILQTGYELNLDWERGKLFDCDVT 261

Query: 648  AMFQKLVVEDGIVEVSDISVKEESKKRPSGLNTVNLLKIASSALGFGPQLAMQLAERLYT 827
            AMFQK V+EDGI EV++IS K+E+K RPSGLNTVNLLK+ASSALGFGPQ+AMQLAERLYT
Sbjct: 262  AMFQKRVIEDGIAEVTEISEKQENKVRPSGLNTVNLLKVASSALGFGPQMAMQLAERLYT 321

Query: 828  QGFISYPRTESTAYPLSFDFKSTLEAQRNNAAWGDYVRDLLATGFLQPRVGTDAGDHPPI 1007
            QGFISYPRTESTAYP SFDFK TL     N  WGDYVR LL+ G+ +PR GTD GDHPPI
Sbjct: 322  QGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDYVRMLLSDGYSKPRSGTDVGDHPPI 381

Query: 1008 TPMRSATEDMLGNDAWRLYQYICQHFIGTVSPDCKYLRTKVEFSTGGEVFYYTGQRVISK 1187
            TPM  ATEDMLG DAWRLYQY+CQHFIG++S DCKY+RTK++FS  GE+F  TG RV  K
Sbjct: 382  TPMCLATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYIRTKIQFSIAGEIFNCTGSRVTVK 441

Query: 1188 GFTCIMPWLAVDEKNLPQFAKGEKMKISKVELYEGNTSPPDYLSESELISLMEKNGIGTD 1367
            GFT IMPWLAV+EK LPQF KGEK+++++V+LY+GNT+PPDYLSESELISLMEK+GIGTD
Sbjct: 442  GFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGNTTPPDYLSESELISLMEKHGIGTD 501

Query: 1368 ASIPVHINNICERNFVQVHAGRRLVPTTLGITLIRGYQTIDPDLCLPDIRSFIEQQITLI 1547
            ASIPVHINNI ERN+VQV AGRRLVPT LGITLIRGYQ IDPDLCLPDIRSFIE QITL+
Sbjct: 502  ASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRGYQCIDPDLCLPDIRSFIEHQITLV 561

Query: 1548 AKGQANHSCVVEHVLQQFRQKYSYFVKQIENMDALFEAQFSPLADSGRLLSKCGKCTRYM 1727
            AKGQA+HS VV+ VLQQFRQKYSYFVK+I++MDALFEAQFSPLADSGR LSKCGKC RYM
Sbjct: 562  AKGQADHSSVVQSVLQQFRQKYSYFVKKIDHMDALFEAQFSPLADSGRALSKCGKCLRYM 621

Query: 1728 KYISVQPSRLYCGTCEEVYNLPQKGTIKLYKELVCPLDNFELLIFSMAGPEGKSFPLCPY 1907
            K+IS QP RLYCG CEEVY LPQKGTIKLYKEL CPLDNFELLI+S+ GPEGKSFPLCPY
Sbjct: 622  KFISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCPLDNFELLIYSLPGPEGKSFPLCPY 681

Query: 1908 CYNNPPFEGIDMLF----SNNKTSSSGKGAGMPCFMCPHPTCQHSVIAQGVCACPECDGT 2075
            CYN+PPFEGI+ L+    +N  + +S KG GMPCFMCPHPTC+HS+I QGVCACPEC GT
Sbjct: 682  CYNSPPFEGINTLYGASKANPSSGTSSKGMGMPCFMCPHPTCRHSLITQGVCACPECSGT 741

Query: 2076 LVLDPVSGPKWRLYCNMCNCLVFLPQGAHRISTTRDRCVECDSTILEVDFNKKTTPLSDG 2255
            LVLDPVS P W+L CN CNCLVFLP+GAHRISTTRD+C +CDSTI+EVDFNKKTTPL DG
Sbjct: 742  LVLDPVSAPNWKLNCNKCNCLVFLPKGAHRISTTRDKCADCDSTIIEVDFNKKTTPLEDG 801

Query: 2256 ATLHSGCILCDDLLHSLVEMKHGKSFYK 2339
            ATL  GCILCD+ LHSL+EMKHGKSF +
Sbjct: 802  ATLFVGCILCDEFLHSLLEMKHGKSFIR 829



 Score =  105 bits (261), Expect = 8e-20
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +1

Query: 1   FNAPTLKSESNPKAHIGRHLSQEARGCGHLVLWLDCDREGENICFEVIECTGFIGKADGR 180
           F A  +K+ESNPKAHI +HLS+EARGC  LVLWLDCDREGENICFEVIEC+GF G    +
Sbjct: 78  FQASVIKTESNPKAHICQHLSREARGCDCLVLWLDCDREGENICFEVIECSGFGGNGTRK 137

Query: 181 RIYRAR 198
           ++YRAR
Sbjct: 138 KVYRAR 143