BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006049
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ00900.1| putative RNA recognition motif-containing protein...   147   2e-33
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   147   3e-33
emb|CBI23047.3| unnamed protein product [Vitis vinifera]              147   3e-33
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   146   3e-33
ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
           guineensis]
          Length = 294

 Score =  147 bits (372), Expect = 2e-33
 Identities = 68/79 (86%), Positives = 74/79 (93%)
 Frame = +1

Query: 1   PGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFVDFGTPAQAATAMDALQGY 180
           P NCTRREVSHIFRPFVGF+EVRLV+KE+RHPGGD LVLCFVDF TPAQAA A+DALQGY
Sbjct: 189 PANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPLVLCFVDFSTPAQAAVALDALQGY 248

Query: 181 KFDEHDRDSDNLRLQFARY 237
           KFDEHDR+S NLRLQFAR+
Sbjct: 249 KFDEHDRESANLRLQFARF 267


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  147 bits (370), Expect = 3e-33
 Identities = 70/79 (88%), Positives = 73/79 (92%)
 Frame = +1

Query: 1   PGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFVDFGTPAQAATAMDALQGY 180
           P NCTRREVSHIFRPFVG+KEVRLVSKE+RH GGD LVLCFVDF +PA AATAMDALQGY
Sbjct: 138 PANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQGY 197

Query: 181 KFDEHDRDSDNLRLQFARY 237
           KFDEHDRDS NLRLQFARY
Sbjct: 198 KFDEHDRDSVNLRLQFARY 216


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  147 bits (370), Expect = 3e-33
 Identities = 70/79 (88%), Positives = 73/79 (92%)
 Frame = +1

Query: 1   PGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFVDFGTPAQAATAMDALQGY 180
           P NCTRREVSHIFRPFVG+KEVRLVSKE+RH GGD LVLCFVDF +PA AATAMDALQGY
Sbjct: 139 PANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQGY 198

Query: 181 KFDEHDRDSDNLRLQFARY 237
           KFDEHDRDS NLRLQFARY
Sbjct: 199 KFDEHDRDSVNLRLQFARY 217


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  146 bits (369), Expect = 3e-33
 Identities = 69/79 (87%), Positives = 74/79 (93%)
 Frame = +1

Query: 1   PGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFVDFGTPAQAATAMDALQGY 180
           P NCTRREV+HIFRPFVG+KEVRLVSKE+RHPGGD LVLCFVDF +PA AATAMDALQGY
Sbjct: 142 PSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAATAMDALQGY 201

Query: 181 KFDEHDRDSDNLRLQFARY 237
           KFDEHDRDS +LRLQFARY
Sbjct: 202 KFDEHDRDSVSLRLQFARY 220


>ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|222858470|gb|EEE96017.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  144 bits (364), Expect = 1e-32
 Identities = 68/79 (86%), Positives = 74/79 (93%)
 Frame = +1

Query: 1   PGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFVDFGTPAQAATAMDALQGY 180
           P +CTRREVSHIFRPFVG+KEVRLVSKE+RHPGGD LVLCFVDF +PA AATAMDALQGY
Sbjct: 142 PSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAATAMDALQGY 201

Query: 181 KFDEHDRDSDNLRLQFARY 237
           +FDEHDRDS +LRLQFARY
Sbjct: 202 RFDEHDRDSFHLRLQFARY 220