BLASTX nr result

ID: Coptis24_contig00006048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006048
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525726.1| syntaxin, putative [Ricinus communis] gi|223...    68   7e-10
ref|XP_002325846.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_004158359.1| PREDICTED: putative syntaxin-131-like [Cucum...    65   8e-09
ref|XP_004141130.1| PREDICTED: putative syntaxin-131-like [Cucum...    65   8e-09
ref|NP_001237539.1| uncharacterized protein LOC100527540 [Glycin...    64   2e-08

>ref|XP_002525726.1| syntaxin, putative [Ricinus communis] gi|223535026|gb|EEF36709.1|
           syntaxin, putative [Ricinus communis]
          Length = 304

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/53 (62%), Positives = 34/53 (64%)
 Frame = -3

Query: 403 VDHVQSGNTALQKAKKLQRNSRKWMCXXXXXXXXXXXXXXXXXLKPWQNKKGA 245
           VDHVQSGNTALQKAKKLQRNSRKWMC                 +KPW N KGA
Sbjct: 252 VDHVQSGNTALQKAKKLQRNSRKWMCIAIIILLIIVVIIVVAVIKPWNNNKGA 304


>ref|XP_002325846.1| predicted protein [Populus trichocarpa] gi|222862721|gb|EEF00228.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/53 (62%), Positives = 33/53 (62%)
 Frame = -3

Query: 403 VDHVQSGNTALQKAKKLQRNSRKWMCXXXXXXXXXXXXXXXXXLKPWQNKKGA 245
           VDHVQSGN ALQKAKKLQRNSRKWMC                 LKPW N KGA
Sbjct: 252 VDHVQSGNVALQKAKKLQRNSRKWMCIAIIILLIIVAIIVVTVLKPWNNNKGA 304


>ref|XP_004158359.1| PREDICTED: putative syntaxin-131-like [Cucumis sativus]
          Length = 307

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/53 (60%), Positives = 33/53 (62%)
 Frame = -3

Query: 403 VDHVQSGNTALQKAKKLQRNSRKWMCXXXXXXXXXXXXXXXXXLKPWQNKKGA 245
           VDHVQ GNTALQKAKKLQ+NSRKWMC                 LKPW N KGA
Sbjct: 255 VDHVQQGNTALQKAKKLQKNSRKWMCIAIIILLIIVVVIVVGVLKPWNNGKGA 307


>ref|XP_004141130.1| PREDICTED: putative syntaxin-131-like [Cucumis sativus]
          Length = 308

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/53 (60%), Positives = 33/53 (62%)
 Frame = -3

Query: 403 VDHVQSGNTALQKAKKLQRNSRKWMCXXXXXXXXXXXXXXXXXLKPWQNKKGA 245
           VDHVQ GNTALQKAKKLQ+NSRKWMC                 LKPW N KGA
Sbjct: 256 VDHVQQGNTALQKAKKLQKNSRKWMCIAIIILLIIVVVIVVGVLKPWNNGKGA 308


>ref|NP_001237539.1| uncharacterized protein LOC100527540 [Glycine max]
           gi|255632572|gb|ACU16636.1| unknown [Glycine max]
          Length = 105

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/53 (58%), Positives = 32/53 (60%)
 Frame = -3

Query: 403 VDHVQSGNTALQKAKKLQRNSRKWMCXXXXXXXXXXXXXXXXXLKPWQNKKGA 245
           VDHVQ GN ALQKAKKLQRNSRKWMC                 +KPW  KKGA
Sbjct: 53  VDHVQQGNNALQKAKKLQRNSRKWMCIAIMILLIVVIIIVVAVIKPWVTKKGA 105


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