BLASTX nr result

ID: Coptis24_contig00006025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006025
         (1906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530850.1| PREDICTED: uncharacterized protein LOC100816...   509   e-141
ref|XP_002320619.1| predicted protein [Populus trichocarpa] gi|2...   503   e-140
ref|XP_003552105.1| PREDICTED: uncharacterized protein LOC100783...   499   e-138
ref|XP_002301805.1| predicted protein [Populus trichocarpa] gi|2...   489   e-135
ref|XP_003622869.1| GTP cyclohydrolase I [Medicago truncatula] g...   483   e-133

>ref|XP_003530850.1| PREDICTED: uncharacterized protein LOC100816351 [Glycine max]
          Length = 457

 Score =  509 bits (1310), Expect = e-141
 Identities = 266/468 (56%), Positives = 326/468 (69%), Gaps = 7/468 (1%)
 Frame = -1

Query: 1675 ISNAVNTLLAGLGEDSNREGLIKTPLRVAKALREGTRGYRQKVKDIVQGALFPEXXXXXX 1496
            + +AV  LL GLGED NREGL KTPLRVAKALREGTRGYRQKVKDIVQGALFPE      
Sbjct: 24   VEDAVKVLLEGLGEDVNREGLRKTPLRVAKALREGTRGYRQKVKDIVQGALFPEAGLDNR 83

Query: 1495 XXXXXXXXXXXXXXXXXLFSYCESCLLPFRVKCHVGYVPSGQRVVGLSKLSRVADVFARR 1316
                             LFSYCESCLLPF VKCHVGYVPSG+RVVGLSKLSRVADVFA+R
Sbjct: 84   VGHAGGAGGLVIVRDLDLFSYCESCLLPFPVKCHVGYVPSGERVVGLSKLSRVADVFAKR 143

Query: 1315 LQDPQRLADEVCSSLYNGIRPAGVGVVLQCWHIEFPQVDCTCHEQINHPTVMDM--QGWL 1142
            LQ+PQRLADEVCS+L+ GI+PAGV ++LQC HI FP ++         P  +D   QGW+
Sbjct: 144  LQEPQRLADEVCSALHRGIKPAGVAIILQCTHIHFPDIE---------PVFLDSNHQGWV 194

Query: 1141 KVSVCAGAGVFEKETGDVWGDFLALLKFRGVKLDKLCNGXXXXXXXXXXXSLDLLAINGH 962
            K+ V +G+GVFE +  DVW DF  LLKFRG+ +DK+                    + G 
Sbjct: 195  KILVSSGSGVFENKNADVWDDFFGLLKFRGINMDKI-------------------HLRGS 235

Query: 961  TNN-WNP----LSYKTSITAEPAPASMITAVAIILLSLGENPSRKELVGTPRRFVQWLMN 797
            ++  W P    LS K S    P    M+TAVA I+ SLGE+P RKEL+GTP RFV+WLMN
Sbjct: 236  SDPCWCPSQSSLSAKVSSKIGPVNPVMVTAVASIIESLGEDPLRKELIGTPSRFVKWLMN 295

Query: 796  FKSSNLEMNLNGFGAEATCQIKSRKQMNKDGVRLRSDRVEFRSELNLPFWSQCEHHLLPF 617
            F++SN +M LNGF  +    + + +++N +         +  SELN+PFWSQCEHHLLPF
Sbjct: 296  FQNSNFDMKLNGFLCDGIDSLNANEEVNVNQ--------KITSELNIPFWSQCEHHLLPF 347

Query: 616  HGVVHIGYFRTEGIEPIGRAILQSIVHFHGWKLQVQERLTRQIVETVSSVFGGDVMAVVE 437
            HGVVHIGY  ++G  P+G+ +LQSIVHF+G+KLQVQERLTRQI ET++ + GGDV+ VVE
Sbjct: 348  HGVVHIGYLMSDGFNPMGKLLLQSIVHFYGFKLQVQERLTRQIAETIAPLLGGDVIVVVE 407

Query: 436  ANHICMISRGIEKVGSSTATIATLGRFSTDPSAKELFLQTVSDSTACG 293
            A+H CMISRGIEK GSSTATIA LG FST+P+A+  FL+++   T+ G
Sbjct: 408  ASHTCMISRGIEKFGSSTATIAVLGHFSTNPTARASFLESIPRPTSSG 455


>ref|XP_002320619.1| predicted protein [Populus trichocarpa] gi|222861392|gb|EEE98934.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  503 bits (1295), Expect = e-140
 Identities = 270/470 (57%), Positives = 323/470 (68%), Gaps = 1/470 (0%)
 Frame = -1

Query: 1699 QEQVVISNISNAVNTLLAGLGEDSNREGLIKTPLRVAKALREGTRGYRQKVKDIVQGALF 1520
            Q+Q     I +AV  LL GLGED NREGL KTPLRVAKALREGT+GY+Q+VK+IVQGALF
Sbjct: 27   QDQPETVAIEDAVKVLLQGLGEDINREGLKKTPLRVAKALREGTKGYKQRVKEIVQGALF 86

Query: 1519 PEXXXXXXXXXXXXXXXXXXXXXXXLFSYCESCLLPFRVKCHVGYVPSGQRVVGLSKLSR 1340
            PE                       LFSYCESCLLPF+VKC +GYVPSGQRVVGLSKLSR
Sbjct: 87   PEVGLDDEVGQAGGAGGLVIVRDLDLFSYCESCLLPFQVKCQIGYVPSGQRVVGLSKLSR 146

Query: 1339 VADVFARRLQDPQRLADEVCSSLYNGIRPAGVGVVLQCWHIEFPQVDCTCHEQINHPTVM 1160
            VADVFA+RLQDPQRLADE+CS+L++G+ PAGV VVLQC HI+FP ++    +  NH    
Sbjct: 147  VADVFAKRLQDPQRLADEICSALHHGVMPAGVAVVLQCLHIQFPNIESLFLDS-NH---- 201

Query: 1159 DMQGWLKVSVCAGAGVFEKETGDVWGDFLALLKFRGVKLDKLCNGXXXXXXXXXXXSLDL 980
              QGW+K  V +G+GVFE E  DVWGDFL+LLKFRG+ LDK                   
Sbjct: 202  --QGWVKAVVHSGSGVFENELADVWGDFLSLLKFRGINLDKT------------------ 241

Query: 979  LAINGHTNNWNPLSYKTSITA-EPAPASMITAVAIILLSLGENPSRKELVGTPRRFVQWL 803
               +     W P  Y +S     P    M+TAV  IL SLGE+P RKELVGTP RFV+WL
Sbjct: 242  QMKDSVQQCWCPSRYSSSAKVIGPPNRGMVTAVTSILSSLGEDPLRKELVGTPSRFVKWL 301

Query: 802  MNFKSSNLEMNLNGFGAEATCQIKSRKQMNKDGVRLRSDRVEFRSELNLPFWSQCEHHLL 623
            MNF+S NLEM LNG        +K   +++ +       + +  +EL L FWSQCEHHLL
Sbjct: 302  MNFQSPNLEMKLNGVACGRMDPLKQNGEVSHN-------KQQIYTELCLSFWSQCEHHLL 354

Query: 622  PFHGVVHIGYFRTEGIEPIGRAILQSIVHFHGWKLQVQERLTRQIVETVSSVFGGDVMAV 443
            PF+GVVHIGY+  E   P+ +++LQSIVHF+G+KLQVQERLTRQI ETVSS+ GGDVM V
Sbjct: 355  PFYGVVHIGYYCAEETTPLSKSLLQSIVHFYGFKLQVQERLTRQIAETVSSLLGGDVMVV 414

Query: 442  VEANHICMISRGIEKVGSSTATIATLGRFSTDPSAKELFLQTVSDSTACG 293
            VEANH CMISRGIEK GSSTATIA LGRFSTDP+A+ +FL+ + +  + G
Sbjct: 415  VEANHTCMISRGIEKFGSSTATIAVLGRFSTDPAARAMFLKNIPNPASGG 464


>ref|XP_003552105.1| PREDICTED: uncharacterized protein LOC100783814 [Glycine max]
          Length = 467

 Score =  499 bits (1285), Expect = e-138
 Identities = 263/466 (56%), Positives = 317/466 (68%), Gaps = 5/466 (1%)
 Frame = -1

Query: 1675 ISNAVNTLLAGLGEDSNREGLIKTPLRVAKALREGTRGYRQKVKDIVQGALFPEXXXXXX 1496
            I +AV  LL GLGED NREGL KTPLRVAKAL EGTRGYRQKV DIVQGALFPE      
Sbjct: 34   IEDAVKVLLEGLGEDVNREGLRKTPLRVAKALHEGTRGYRQKVNDIVQGALFPEAGLDNR 93

Query: 1495 XXXXXXXXXXXXXXXXXLFSYCESCLLPFRVKCHVGYVPSGQRVVGLSKLSRVADVFARR 1316
                             LFSYCESCLLPF VKCHVGYVPSG+RVVGLSKLSRVADVFA+R
Sbjct: 94   VGHAGGAGGLVIVRDLDLFSYCESCLLPFPVKCHVGYVPSGERVVGLSKLSRVADVFAKR 153

Query: 1315 LQDPQRLADEVCSSLYNGIRPAGVGVVLQCWHIEFPQVDCTCHEQINHPTVMDMQGWLKV 1136
            LQ+PQRLADEVCS+L+ GIRPAGV ++LQC HI FP ++    +        + QGW+K+
Sbjct: 154  LQEPQRLADEVCSALHQGIRPAGVAIILQCSHIHFPDIESVFLDS-------NYQGWVKI 206

Query: 1135 SVCAGAGVFEKETGDVWGDFLALLKFRGVKLDKLCNGXXXXXXXXXXXSLDLLAINGHTN 956
             V +G+GVFE +  DVW DF  LLKFRG+ +DK+                      G ++
Sbjct: 207  LVSSGSGVFENKNADVWADFFGLLKFRGINMDKI-------------------HFRGSSD 247

Query: 955  N-WNP----LSYKTSITAEPAPASMITAVAIILLSLGENPSRKELVGTPRRFVQWLMNFK 791
              W P    LS K S    P    M+TAVA ++ SLGENP RKEL+GTP RFV+WLMNF+
Sbjct: 248  PCWCPSQSSLSAKVSSKIGPVNPVMVTAVASVIESLGENPLRKELIGTPTRFVKWLMNFQ 307

Query: 790  SSNLEMNLNGFGAEATCQIKSRKQMNKDGVRLRSDRVEFRSELNLPFWSQCEHHLLPFHG 611
             SN  + LNGF  +    +   + +N +         +  SELN+PFWSQCEHHLLPFHG
Sbjct: 308  KSNFNIKLNGFLCDGIDSLNVNEDVNINK--------KITSELNIPFWSQCEHHLLPFHG 359

Query: 610  VVHIGYFRTEGIEPIGRAILQSIVHFHGWKLQVQERLTRQIVETVSSVFGGDVMAVVEAN 431
            VVHIGY  ++G  PI +++LQSIVHF+G+KLQVQERLTRQI ET++ + GGDV+ VVEA+
Sbjct: 360  VVHIGYLMSDGFNPILKSLLQSIVHFYGFKLQVQERLTRQIAETIAPLLGGDVIVVVEAS 419

Query: 430  HICMISRGIEKVGSSTATIATLGRFSTDPSAKELFLQTVSDSTACG 293
            H CMISRGIEK GSSTATI  LG FSTDP+A+  FL+++   T+ G
Sbjct: 420  HTCMISRGIEKFGSSTATIGVLGHFSTDPTARASFLKSIPYPTSSG 465


>ref|XP_002301805.1| predicted protein [Populus trichocarpa] gi|222843531|gb|EEE81078.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  489 bits (1258), Expect = e-135
 Identities = 271/499 (54%), Positives = 327/499 (65%), Gaps = 6/499 (1%)
 Frame = -1

Query: 1771 MGALNDEHFXXXXXXXXXXXXXXE--QEQVVISNISNAVNTLLAGLGEDSNREGLIKTPL 1598
            MGAL++EHF                 ++Q+    I +AV  LL GLGED NREGL KTPL
Sbjct: 1    MGALDEEHFNKEIENGVELDCLDLGFEDQLETVAIEDAVKVLLQGLGEDINREGLKKTPL 60

Query: 1597 RVAKALREGTRGYRQKVKDIVQGALFPEXXXXXXXXXXXXXXXXXXXXXXXLFSYCESCL 1418
            RVAKALREGT+GY+QK KDIVQ ALFPE                       LFSYCESCL
Sbjct: 61   RVAKALREGTKGYKQKAKDIVQSALFPEVGLDDAVGHAGGAGGLVIVRDLDLFSYCESCL 120

Query: 1417 LPFRVKCHVGYVPSGQRVVGLSKLSRVADVFARRLQDPQRLADEVCSSLYNGIRPAGVGV 1238
            LPF+VKC +GYVPSGQRVVGLSKLSRVADVFA+RLQDPQRLADE+CS+L+ GI+PAGV V
Sbjct: 121  LPFQVKCQIGYVPSGQRVVGLSKLSRVADVFAKRLQDPQRLADEICSALHLGIKPAGVAV 180

Query: 1237 VLQCWHIEFPQVDCTCHEQINHPTVMD--MQGWLKVSVCAGAGVFEKETGDVWGDFLALL 1064
            +LQC HI FP ++         P  +D  +QGW+K  V +G+GVFE +  DVW DF +LL
Sbjct: 181  ILQCSHIHFPNIE---------PPFLDSNLQGWVKALVHSGSGVFENDFADVWDDFFSLL 231

Query: 1063 KFRGVKLDKLCNGXXXXXXXXXXXSLDLLAINGHTNNWNPLSYKTS--ITAEPAPASMIT 890
            KFRG+ +DK                   L  +     W P  Y +S  +T +P    M+T
Sbjct: 232  KFRGINVDK------------------TLMKDSKQQCWCPSQYSSSAEVTGQP-NTGMVT 272

Query: 889  AVAIILLSLGENPSRKELVGTPRRFVQWLMNFKSSNLEMNLNGFGAEATCQIKSRKQMNK 710
            AV  IL+SLGENP RKEL GTP  FV+WLMNF+++NLE  LNGF       +K   +++ 
Sbjct: 273  AVTSILISLGENPLRKELAGTPSHFVKWLMNFQNANLETKLNGFACGRMDPLKQNGEVSH 332

Query: 709  DGVRLRSDRVEFRSELNLPFWSQCEHHLLPFHGVVHIGYFRTEGIEPIGRAILQSIVHFH 530
            D            +ELNL F SQCEHHLLPF+GVVHIGY+  E I P+ ++ LQSIV F+
Sbjct: 333  D--------KRMYTELNLSFCSQCEHHLLPFYGVVHIGYY-AEEITPVIKSRLQSIVRFY 383

Query: 529  GWKLQVQERLTRQIVETVSSVFGGDVMAVVEANHICMISRGIEKVGSSTATIATLGRFST 350
            G+KLQVQERLTRQI ET SS+ GGDV+ VVEANH CMISRGIEK GSSTATIA LG FST
Sbjct: 384  GFKLQVQERLTRQIAETASSLLGGDVVVVVEANHTCMISRGIEKFGSSTATIAVLGLFST 443

Query: 349  DPSAKELFLQTVSDSTACG 293
            DP+A+  FLQ + +  + G
Sbjct: 444  DPAARAKFLQNIPNPASGG 462


>ref|XP_003622869.1| GTP cyclohydrolase I [Medicago truncatula]
            gi|355497884|gb|AES79087.1| GTP cyclohydrolase I
            [Medicago truncatula]
          Length = 456

 Score =  483 bits (1242), Expect = e-133
 Identities = 257/463 (55%), Positives = 319/463 (68%), Gaps = 2/463 (0%)
 Frame = -1

Query: 1681 SNISNAVNTLLAGLGEDSNREGLIKTPLRVAKALREGTRGYRQKVKDIVQGALFPEXXXX 1502
            S I +AV  LL GLGED NREG+ KTPLRVAKALR+GTRGYRQKVKDIV+GALFPE    
Sbjct: 24   SAIEDAVKVLLMGLGEDINREGIRKTPLRVAKALRDGTRGYRQKVKDIVEGALFPEAGLD 83

Query: 1501 XXXXXXXXXXXXXXXXXXXLFSYCESCLLPFRVKCHVGYVPSGQRVVGLSKLSRVADVFA 1322
                               LFSYCESC+LPF+VKCHVGYVPS +RVVGLSKLSRVADVFA
Sbjct: 84   NRVGHAGGAGGLVIVRDIDLFSYCESCMLPFQVKCHVGYVPSSERVVGLSKLSRVADVFA 143

Query: 1321 RRLQDPQRLADEVCSSLYNGIRPAGVGVVLQCWHIEFPQVDCTCHEQINHPTVMDMQGWL 1142
            +RLQ+PQRLA+EVCS+L++GI+P GV ++LQC HI FP V+    +  NH      QG +
Sbjct: 144  KRLQEPQRLANEVCSALHHGIKPDGVAIILQCTHIHFPDVESVFLDS-NH------QGLV 196

Query: 1141 KVSVCAGAGVFEKETGDVWGDFLALLKFRGVKLDKLCNGXXXXXXXXXXXSLDLLAINGH 962
            K+ V AG+GVFE +  D W DF +LLKFRG+ ++K+                      G 
Sbjct: 197  KILVSAGSGVFENKNADEWADFFSLLKFRGISMEKI-------------------NFRGS 237

Query: 961  TN-NW-NPLSYKTSITAEPAPASMITAVAIILLSLGENPSRKELVGTPRRFVQWLMNFKS 788
            ++ +W +  S K S    P   +M+TA A I+ SLGE+P RKEL GTP RFV+WLMNF++
Sbjct: 238  SDMSWCSSQSAKISSKVGPVNPAMVTAAASIIKSLGEDPLRKELRGTPTRFVKWLMNFQN 297

Query: 787  SNLEMNLNGFGAEATCQIKSRKQMNKDGVRLRSDRVEFRSELNLPFWSQCEHHLLPFHGV 608
             N +M LNGF       + + K++  +  ++ S       ELNL FWSQCEHHLLPFHGV
Sbjct: 298  CNFDMKLNGFLNGGIASLDTNKEVELNDKKICS-------ELNLAFWSQCEHHLLPFHGV 350

Query: 607  VHIGYFRTEGIEPIGRAILQSIVHFHGWKLQVQERLTRQIVETVSSVFGGDVMAVVEANH 428
            VHIGY  ++G  PIG+++LQSIVHF+G+KLQVQERLTRQI ET+S + GGDV+ VVEA+H
Sbjct: 351  VHIGYILSDGFSPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLIGGDVIVVVEASH 410

Query: 427  ICMISRGIEKVGSSTATIATLGRFSTDPSAKELFLQTVSDSTA 299
             CMISRGIEK GSSTATIA LG+FSTD + +  FLQ +   T+
Sbjct: 411  TCMISRGIEKFGSSTATIAVLGQFSTDLTTRASFLQGIPSPTS 453


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