BLASTX nr result

ID: Coptis24_contig00006018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006018
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC53938.1| Myb-like protein [Nicotiana tabacum]                  194   3e-47
ref|XP_002310702.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47
ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis...   192   1e-46
emb|CAN75196.1| hypothetical protein VITISV_014739 [Vitis vinifera]   192   1e-46
gb|AAY28930.1| sucrose responsive element binding protein [Vitis...   192   1e-46

>dbj|BAC53938.1| Myb-like protein [Nicotiana tabacum]
          Length = 329

 Score =  194 bits (492), Expect = 3e-47
 Identities = 96/134 (71%), Positives = 100/134 (74%)
 Frame = -2

Query: 925 WSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPQVEXXXXXXXXXXX 746
           WSPEEDE L  LVEKHG RNWS+ISKS+PGRSGKSCRLRWCNQLSPQV            
Sbjct: 17  WSPEEDELLQSLVEKHGPRNWSLISKSVPGRSGKSCRLRWCNQLSPQV------------ 64

Query: 745 XXXXXXXXXXXXLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHW 566
                            EHRAFTSEEDETI+RAH+KFGNKWATIARLLSGRTDNAIKNHW
Sbjct: 65  -----------------EHRAFTSEEDETIIRAHAKFGNKWATIARLLSGRTDNAIKNHW 107

Query: 565 NSTLKRKCCSMIED 524
           NSTLKRKCCSM ED
Sbjct: 108 NSTLKRKCCSMSED 121


>ref|XP_002310702.1| predicted protein [Populus trichocarpa] gi|222853605|gb|EEE91152.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  194 bits (492), Expect = 3e-47
 Identities = 101/167 (60%), Positives = 113/167 (67%), Gaps = 2/167 (1%)
 Frame = -2

Query: 925 WSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPQVEXXXXXXXXXXX 746
           WSPEEDE+L KLV+KHGARNWS+ISKSIPGRSGKSCRLRWCNQLSPQV            
Sbjct: 15  WSPEEDEALQKLVQKHGARNWSLISKSIPGRSGKSCRLRWCNQLSPQV------------ 62

Query: 745 XXXXXXXXXXXXLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHW 566
                            EHR FT +ED+TI+RAH++FGNKWATIARLL GRTDNAIKNHW
Sbjct: 63  -----------------EHRPFTPDEDDTIIRAHARFGNKWATIARLLYGRTDNAIKNHW 105

Query: 565 NSTLKRKCCSMIEDGN--SNDGFGGFEQDRRRQPSLKRXXXXXXSIP 431
           NSTLKRKC SM EDGN  + +G+ G       QP LKR       +P
Sbjct: 106 NSTLKRKCSSMAEDGNFCNREGYDGNLDGDNTQP-LKRSVSAGSGVP 151


>ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis vinifera]
          Length = 312

 Score =  192 bits (487), Expect = 1e-46
 Identities = 96/143 (67%), Positives = 106/143 (74%)
 Frame = -2

Query: 925 WSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPQVEXXXXXXXXXXX 746
           WSPEED++L KLV+KHG RNWS+ISKSIPGRSGKSCRLRWCNQLSPQV            
Sbjct: 15  WSPEEDDALQKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQV------------ 62

Query: 745 XXXXXXXXXXXXLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHW 566
                            EHRAFTSEED+TIMRAH++FGNKWATIARLLSGRTDNAIKNHW
Sbjct: 63  -----------------EHRAFTSEEDDTIMRAHARFGNKWATIARLLSGRTDNAIKNHW 105

Query: 565 NSTLKRKCCSMIEDGNSNDGFGG 497
           NSTLKRKC ++ EDG+    FGG
Sbjct: 106 NSTLKRKCSAITEDGS----FGG 124


>emb|CAN75196.1| hypothetical protein VITISV_014739 [Vitis vinifera]
          Length = 301

 Score =  192 bits (487), Expect = 1e-46
 Identities = 96/143 (67%), Positives = 106/143 (74%)
 Frame = -2

Query: 925 WSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPQVEXXXXXXXXXXX 746
           WSPEED++L KLV+KHG RNWS+ISKSIPGRSGKSCRLRWCNQLSPQV            
Sbjct: 15  WSPEEDDALQKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQV------------ 62

Query: 745 XXXXXXXXXXXXLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHW 566
                            EHRAFTSEED+TIMRAH++FGNKWATIARLLSGRTDNAIKNHW
Sbjct: 63  -----------------EHRAFTSEEDDTIMRAHARFGNKWATIARLLSGRTDNAIKNHW 105

Query: 565 NSTLKRKCCSMIEDGNSNDGFGG 497
           NSTLKRKC ++ EDG+    FGG
Sbjct: 106 NSTLKRKCSAITEDGS----FGG 124


>gb|AAY28930.1| sucrose responsive element binding protein [Vitis vinifera]
          Length = 312

 Score =  192 bits (487), Expect = 1e-46
 Identities = 96/143 (67%), Positives = 106/143 (74%)
 Frame = -2

Query: 925 WSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPQVEXXXXXXXXXXX 746
           WSPEED++L KLV+KHG RNWS+ISKSIPGRSGKSCRLRWCNQLSPQV            
Sbjct: 15  WSPEEDDALQKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQV------------ 62

Query: 745 XXXXXXXXXXXXLSPQVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHW 566
                            EHRAFTSEED+TIMRAH++FGNKWATIARLLSGRTDNAIKNHW
Sbjct: 63  -----------------EHRAFTSEEDDTIMRAHARFGNKWATIARLLSGRTDNAIKNHW 105

Query: 565 NSTLKRKCCSMIEDGNSNDGFGG 497
           NSTLKRKC ++ EDG+    FGG
Sbjct: 106 NSTLKRKCSAITEDGS----FGG 124