BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005992
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   129   3e-28
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   121   5e-26
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l...   114   1e-23
ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l...   112   3e-23

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/96 (65%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
 Frame = +2

Query: 59  MEEDTVENKIISLSSENKKNE--LFSCILQPISPDSDLNYVGIRRLLLYKKAQSGVDRRK 232
           M E+T+E    S    NK  +   FSC+LQP S DSD  Y+GIRRLLL +KA+SGV RRK
Sbjct: 1   MAEETIEKSSSSEEENNKAVDPTFFSCLLQPSSADSDPQYIGIRRLLLRRKAESGVHRRK 60

Query: 233 DWRCNGKGYVAYRNYISRPRNWESLYTQSGQSTPGQ 340
           DWRCNGKGYVAYRNYI RPRNWESL+  S  STPGQ
Sbjct: 61  DWRCNGKGYVAYRNYIRRPRNWESLHAPSHSSTPGQ 96


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/92 (61%), Positives = 70/92 (76%), Gaps = 5/92 (5%)
 Frame = +2

Query: 77  ENKIISLSSENKKN-----ELFSCILQPISPDSDLNYVGIRRLLLYKKAQSGVDRRKDWR 241
           +N   SL+  N+K      ELFSC+LQP++ DSD  Y+GIRRLLLY+K+ SGV+RR DWR
Sbjct: 22  DNTSTSLTDNNEKKNKVDPELFSCLLQPVTTDSDPEYIGIRRLLLYRKSDSGVNRRLDWR 81

Query: 242 CNGKGYVAYRNYISRPRNWESLYTQSGQSTPG 337
           CNGKGYV+YRNYI RPRNWE+    S Q+TPG
Sbjct: 82  CNGKGYVSYRNYIRRPRNWENQQIPSLQTTPG 113


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/83 (67%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
 Frame = +2

Query: 98  SSENKKN---ELFSCILQPISPDSDLNYVGIRRLLLYKKAQSGVDRRKDWRCNGKGYVAY 268
           + + KKN   ELFSC+LQP++ DSD +Y+GIRRLLLY+KA+SGV RR DWRCNGKGY +Y
Sbjct: 39  NKDKKKNVDPELFSCLLQPVTSDSDPDYIGIRRLLLYRKAESGVRRRLDWRCNGKGYTSY 98

Query: 269 RNYISRPRNWESLYTQSGQSTPG 337
           RNYI RPRNW+ L   S QSTPG
Sbjct: 99  RNYIRRPRNWDGL--PSHQSTPG 119


>ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 514

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/86 (65%), Positives = 69/86 (80%), Gaps = 6/86 (6%)
 Frame = +2

Query: 98  SSENKKN----ELFSCILQPISPDSDLNYVGIRRLLLYKKAQSGVDRRKDWRCNGKGYVA 265
           +++N+K+    ELF C+LQP + D D  Y+GIRRLLL++KA++GV RR+DWRCNGK YVA
Sbjct: 40  NNDNEKSTSDPELFCCLLQPATTDGDPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYVA 99

Query: 266 YRNYISRPRNWE--SLYTQSGQSTPG 337
           YRNYISRPRNWE  SL T S QSTPG
Sbjct: 100 YRNYISRPRNWERDSLRTPSLQSTPG 125


>ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus]
           gi|449519860|ref|XP_004166952.1| PREDICTED: WD
           repeat-containing protein 13-like [Cucumis sativus]
          Length = 490

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = +2

Query: 98  SSENKKNELFSCILQPISPDSDLNYVGIRRLLLYKKAQSGVDRRKDWRCNGKGYVAYRNY 277
           S +N   EL SC+LQP+S   D +Y+GIRRLLLY+KA++ + RRKDWRCNGKGYVA+RN+
Sbjct: 33  SKKNVDPELLSCLLQPMSIGVDPDYIGIRRLLLYRKAEAAIFRRKDWRCNGKGYVAFRNF 92

Query: 278 ISRPRNWESLYTQSGQSTPG 337
           I RPRNWES    S QSTPG
Sbjct: 93  IRRPRNWESSRLPSLQSTPG 112