BLASTX nr result
ID: Coptis24_contig00005985
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005985
(1965 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI20464.3| unnamed protein product [Vitis vinifera] 529 e-148
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l... 529 e-148
ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|2... 505 e-140
gb|EEC73028.1| hypothetical protein OsI_06965 [Oryza sativa Indi... 470 e-130
ref|NP_001046682.1| Os02g0319800 [Oryza sativa Japonica Group] g... 468 e-129
>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 529 bits (1363), Expect = e-148
Identities = 267/401 (66%), Positives = 312/401 (77%), Gaps = 4/401 (0%)
Frame = +2
Query: 14 PDSLPMKRSRPENHP--PQKDAFIPGRYISKRERXXXXXXXXXXXXXXXKQPASSVVTSP 187
P P+KR +P+N P P+ I GRYISKRER PA+S SP
Sbjct: 113 PTPPPLKRFKPQNPPLLPKPYPLIAGRYISKRERSLLSPALSPPLP----NPAASA--SP 166
Query: 188 VVGSISDFKIRADIXXXXXXXXXXXXXXX-IPERVTTSLNSHTKAVNAIQWSPTNAHLLA 364
V+GSISD + DI I ER++ L SH K+VN IQWSPT+AHLLA
Sbjct: 167 VMGSISDSDLPRDILSSLRHQAKGRSQLGRISERLSVDLKSHKKSVNTIQWSPTHAHLLA 226
Query: 365 SAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCGYDCSSRLVDVEK 541
SAGMD+ +C+WN WS + Q+KAR F+YHNAAVK ++W GLS+LSCGYDCSSRL+DVEK
Sbjct: 227 SAGMDHAICIWNAWSRD-QKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVEK 285
Query: 542 GIQTQLFKEDQVLGVIKFHPDNCSLFISGGSEGLLRLWDIRVGRVVQEFMRNLGPILDIE 721
G+QTQ+F EDQV+GVIK HPDN +LF+SGGS+G LRLWDIR G+VV E++R LGPILDIE
Sbjct: 286 GLQTQIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHEYIRGLGPILDIE 345
Query: 722 FSNDAKQFISSSDISKSNATENSIVVWDVLRQVPLSNQIYVEAYSCPCIKHHPFERSFVA 901
F+ +AKQFISSSD+S SN +ENSIVVWDV RQVPLSNQ+YVEAY+CPCI+ HP + F+A
Sbjct: 346 FTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYTCPCIRCHPSDPFFIA 405
Query: 902 QSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDFSLDGEKLASGSSDGCLYLYDYR 1081
QSNGNYIAIFSS PFKLDKYKRYENHGVSGFP+KC+FSLDGEKLASGSSDGC+YLYDYR
Sbjct: 406 QSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGEKLASGSSDGCIYLYDYR 465
Query: 1082 SSELLRKIKVYEQACIDVAFHPKLPNVIASCSWSGDVSVFE 1204
SSEL++KIK YEQACIDVAFHP LPNVIA+C W G VSVFE
Sbjct: 466 SSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 506
>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
Length = 418
Score = 529 bits (1363), Expect = e-148
Identities = 267/401 (66%), Positives = 312/401 (77%), Gaps = 4/401 (0%)
Frame = +2
Query: 14 PDSLPMKRSRPENHP--PQKDAFIPGRYISKRERXXXXXXXXXXXXXXXKQPASSVVTSP 187
P P+KR +P+N P P+ I GRYISKRER PA+S SP
Sbjct: 25 PTPPPLKRFKPQNPPLLPKPYPLIAGRYISKRERSLLSPALSPPLP----NPAASA--SP 78
Query: 188 VVGSISDFKIRADIXXXXXXXXXXXXXXX-IPERVTTSLNSHTKAVNAIQWSPTNAHLLA 364
V+GSISD + DI I ER++ L SH K+VN IQWSPT+AHLLA
Sbjct: 79 VMGSISDSDLPRDILSSLRHQAKGRSQLGRISERLSVDLKSHKKSVNTIQWSPTHAHLLA 138
Query: 365 SAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCGYDCSSRLVDVEK 541
SAGMD+ +C+WN WS + Q+KAR F+YHNAAVK ++W GLS+LSCGYDCSSRL+DVEK
Sbjct: 139 SAGMDHAICIWNAWSRD-QKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVEK 197
Query: 542 GIQTQLFKEDQVLGVIKFHPDNCSLFISGGSEGLLRLWDIRVGRVVQEFMRNLGPILDIE 721
G+QTQ+F EDQV+GVIK HPDN +LF+SGGS+G LRLWDIR G+VV E++R LGPILDIE
Sbjct: 198 GLQTQIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHEYIRGLGPILDIE 257
Query: 722 FSNDAKQFISSSDISKSNATENSIVVWDVLRQVPLSNQIYVEAYSCPCIKHHPFERSFVA 901
F+ +AKQFISSSD+S SN +ENSIVVWDV RQVPLSNQ+YVEAY+CPCI+ HP + F+A
Sbjct: 258 FTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYTCPCIRCHPSDPFFIA 317
Query: 902 QSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDFSLDGEKLASGSSDGCLYLYDYR 1081
QSNGNYIAIFSS PFKLDKYKRYENHGVSGFP+KC+FSLDGEKLASGSSDGC+YLYDYR
Sbjct: 318 QSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGEKLASGSSDGCIYLYDYR 377
Query: 1082 SSELLRKIKVYEQACIDVAFHPKLPNVIASCSWSGDVSVFE 1204
SSEL++KIK YEQACIDVAFHP LPNVIA+C W G VSVFE
Sbjct: 378 SSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 418
>ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|222857635|gb|EEE95182.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 505 bits (1300), Expect = e-140
Identities = 257/397 (64%), Positives = 306/397 (77%), Gaps = 4/397 (1%)
Frame = +2
Query: 26 PMKRSRPENHPPQK---DAFIPGRYISKRERXXXXXXXXXXXXXXXKQPASSVVTSPVVG 196
P KR +PE P Q +A +PGRYISKRER PA++ +P
Sbjct: 39 PPKRFKPET-PSQNFRTEAPVPGRYISKRERALSAQSPRVP------NPATNPNLNPNPP 91
Query: 197 SISDFKIRADIXXXXXXXXXXXXXXXIPERVTTSLNSHTKAVNAIQWSPTNAHLLASAGM 376
RA + IP+R+ L SHTKAVNA+ WSP++AHLLASAGM
Sbjct: 92 G------RASLSQ-------------IPKRLAVDLRSHTKAVNALDWSPSHAHLLASAGM 132
Query: 377 DY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCGYDCSSRLVDVEKGIQT 553
D VCVWNVWS + Q+ AR+F YHNAAVK ++WS GLS+LSCGYDCSSRL+DVEKGI+T
Sbjct: 133 DQTVCVWNVWSRD-QKIARLFRYHNAAVKDVKWSPQGLSVLSCGYDCSSRLIDVEKGIET 191
Query: 554 QLFKEDQVLGVIKFHPDNCSLFISGGSEGLLRLWDIRVGRVVQEFMRNLGPILDIEFSND 733
Q+FKEDQV+GVIKF PDN ++F+SGGS+G LRLWDIR G VV+E++R LGPILD+EF+ +
Sbjct: 192 QIFKEDQVVGVIKFCPDNSNIFLSGGSKGCLRLWDIRNGNVVREYIRGLGPILDVEFTIN 251
Query: 734 AKQFISSSDISKSNATENSIVVWDVLRQVPLSNQIYVEAYSCPCIKHHPFERSFVAQSNG 913
KQFISSSD+S SN +ENSI+VWDV RQVPLSNQ+YVEAY+CP ++ HPFE FVAQSN
Sbjct: 252 GKQFISSSDVSGSNLSENSIIVWDVSRQVPLSNQVYVEAYTCPSVRCHPFEPCFVAQSNA 311
Query: 914 NYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDFSLDGEKLASGSSDGCLYLYDYRSSEL 1093
NYIAIFSS+ PF+LDKYKRYE+HGVSGFPVKC+FSLDGEKL SGSSDGC+Y+Y+YRSSEL
Sbjct: 312 NYIAIFSSSPPFRLDKYKRYESHGVSGFPVKCNFSLDGEKLVSGSSDGCIYIYNYRSSEL 371
Query: 1094 LRKIKVYEQACIDVAFHPKLPNVIASCSWSGDVSVFE 1204
+RKIKVYEQACIDV FHP LPNVI SCSW+GDVS+FE
Sbjct: 372 IRKIKVYEQACIDVVFHPVLPNVIGSCSWNGDVSIFE 408
>gb|EEC73028.1| hypothetical protein OsI_06965 [Oryza sativa Indica Group]
Length = 451
Score = 470 bits (1210), Expect = e-130
Identities = 234/402 (58%), Positives = 297/402 (73%), Gaps = 3/402 (0%)
Frame = +2
Query: 8 PLPDSLPMKR-SRPENHPPQKDAFIPGRYISKRERXXXXXXXXXXXXXXXKQP-ASSVVT 181
P P P+ + +RP PP GRY+SKRER P A++
Sbjct: 52 PPPPPYPIPQPARPRAAPPPAST-ASGRYVSKRERALMAASSSPVDSSSPLPPSAAAQFG 110
Query: 182 SPVVGSISDFKIRADIXXXXXXXXXXXXXXXIPERVTTSLNSHTKAVNAIQWSPTNAHLL 361
SPVVGSISD +RADI +P +++ SL HTKAVN + WS ++AHLL
Sbjct: 111 SPVVGSISDSNLRADIFHSLRCQTKPGSTRRMPLKLSVSLTGHTKAVNCVDWSQSHAHLL 170
Query: 362 ASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCGYDCSSRLVDVE 538
ASAGMD+ V V+NVW+ +G ARVF +H AAVK +RWS +GLSLLS G+DCS RLVDVE
Sbjct: 171 ASAGMDHTVHVFNVWN-KGNTTARVFKFHTAAVKDVRWSLNGLSLLSGGFDCSLRLVDVE 229
Query: 539 KGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSEGLLRLWDIRVGRVVQEFMRNLGPILDI 718
+G + ++FKEDQ + VIKF+P N +LF+SGGS+G LRLWDIR G V +E+ RNLG ILDI
Sbjct: 230 EGKEIKVFKEDQAVEVIKFNPSNSNLFLSGGSKGSLRLWDIRSGLVTKEYQRNLGTILDI 289
Query: 719 EFSNDAKQFISSSDISKSNATENSIVVWDVLRQVPLSNQIYVEAYSCPCIKHHPFERSFV 898
EFS+D KQFI S+D S+SN +ENSI++WD LRQVPLSNQ+Y EAY+CPC+++HPFE SFV
Sbjct: 290 EFSSDGKQFICSTDTSRSNVSENSIIIWDTLRQVPLSNQVYTEAYTCPCVRYHPFEASFV 349
Query: 899 AQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDFSLDGEKLASGSSDGCLYLYDY 1078
AQSNGNYIAIFS+ +PFKL+KY RYE HGV GFP+KC+FS G++LASGSSDGC+Y YDY
Sbjct: 350 AQSNGNYIAIFSAKSPFKLNKYMRYEGHGVWGFPIKCNFSFSGKELASGSSDGCIYFYDY 409
Query: 1079 RSSELLRKIKVYEQACIDVAFHPKLPNVIASCSWSGDVSVFE 1204
+SS LL KI+ +++ C DVA+HP +PNVIASCSW+G+++VFE
Sbjct: 410 KSSRLLSKIQAFKEPCTDVAYHPVIPNVIASCSWAGEIAVFE 451
>ref|NP_001046682.1| Os02g0319800 [Oryza sativa Japonica Group]
gi|50252728|dbj|BAD28954.1| putative splicing factor
[Oryza sativa Japonica Group]
gi|113536213|dbj|BAF08596.1| Os02g0319800 [Oryza sativa
Japonica Group] gi|215767168|dbj|BAG99396.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222622720|gb|EEE56852.1| hypothetical protein
OsJ_06469 [Oryza sativa Japonica Group]
Length = 451
Score = 468 bits (1205), Expect = e-129
Identities = 232/402 (57%), Positives = 296/402 (73%), Gaps = 3/402 (0%)
Frame = +2
Query: 8 PLPDSLPMKR-SRPENHPPQKDAFIPGRYISKRERXXXXXXXXXXXXXXXKQP-ASSVVT 181
P P P+ + +RP PP GRY+SKRER P A++
Sbjct: 52 PPPPPYPIPQPARPRAAPPPAST-ASGRYVSKRERALMAASSSPVDSSSPLPPSAAAQFG 110
Query: 182 SPVVGSISDFKIRADIXXXXXXXXXXXXXXXIPERVTTSLNSHTKAVNAIQWSPTNAHLL 361
SPVVGSISD +RADI +P +++ SL HTKAVN + WS ++AHLL
Sbjct: 111 SPVVGSISDSNLRADIFHSLRCQTKPGSTRRMPLKLSVSLTGHTKAVNCVDWSQSHAHLL 170
Query: 362 ASAGMDY-VCVWNVWSTEGQRKARVFNYHNAAVKHLRWSHDGLSLLSCGYDCSSRLVDVE 538
ASAGMD+ + V+NVW+ +G ARVF +H AAVK +RWS +GLSLLS G+DCS RLVDVE
Sbjct: 171 ASAGMDHTIHVFNVWN-KGNTTARVFKFHTAAVKDVRWSLNGLSLLSGGFDCSLRLVDVE 229
Query: 539 KGIQTQLFKEDQVLGVIKFHPDNCSLFISGGSEGLLRLWDIRVGRVVQEFMRNLGPILDI 718
+G + ++FKEDQ + VIKF+P N +LF+SGGS+G LRLWDIR G V +E+ RNLG ILDI
Sbjct: 230 EGKEIKVFKEDQAVEVIKFNPSNSNLFLSGGSKGSLRLWDIRSGLVTKEYQRNLGTILDI 289
Query: 719 EFSNDAKQFISSSDISKSNATENSIVVWDVLRQVPLSNQIYVEAYSCPCIKHHPFERSFV 898
EFS+D KQFI S+D S+SN +ENSI++WD LRQVPLSNQ+Y EAY+CPC+++HPFE SFV
Sbjct: 290 EFSSDGKQFICSTDTSRSNVSENSIIIWDTLRQVPLSNQVYTEAYTCPCVRYHPFEASFV 349
Query: 899 AQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDFSLDGEKLASGSSDGCLYLYDY 1078
AQSNGNYIAIFS+ +PFKL+KY RYE HGV GFP+KC+FS G++L SGSSDGC+Y YDY
Sbjct: 350 AQSNGNYIAIFSAKSPFKLNKYMRYEGHGVWGFPIKCNFSFSGKELTSGSSDGCIYFYDY 409
Query: 1079 RSSELLRKIKVYEQACIDVAFHPKLPNVIASCSWSGDVSVFE 1204
+SS LL KI+ +++ C DVA+HP +PNVIASCSW+G+++VFE
Sbjct: 410 KSSRLLSKIQAFKEPCTDVAYHPVIPNVIASCSWAGEIAVFE 451