BLASTX nr result

ID: Coptis24_contig00005979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005979
         (1797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140670.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   459   e-126
emb|CBI37205.3| unnamed protein product [Vitis vinifera]              452   e-124
ref|XP_003553516.1| PREDICTED: uncharacterized protein LOC100814...   441   e-121
ref|XP_002301838.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
ref|NP_179622.5| DENN (AEX-3) domain-containing protein [Arabido...   438   e-120

>ref|XP_004140670.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101209770
            [Cucumis sativus]
          Length = 835

 Score =  459 bits (1180), Expect = e-126
 Identities = 254/524 (48%), Positives = 331/524 (63%), Gaps = 3/524 (0%)
 Frame = -1

Query: 1563 LEDERPSSPYEVLQHISGEAVRVASEAIQSVYNHNNNIGASNSGNVSPVVGKLXXXXXXX 1384
            L DERP SP  VLQ  S EA RVA EA+ SVY+    +     G+               
Sbjct: 9    LVDERPPSPIWVLQQFSEEAFRVAGEALNSVYHGGTGLQEMGMGH------------RRA 56

Query: 1383 XXXXXXXXXXXXXXFQKWKAQMQRALQRGGH-KEEQYRKSSFNPEVLVNQKRQWYQHHSK 1207
                          FQ+ K+ +Q+A   G   +++ Y    F+PE+L NQKRQWYQ HSK
Sbjct: 57   RSEVLSAKHKRSNSFQRLKSHVQKAWGWGRDARDDDYAFYRFDPEILANQKRQWYQFHSK 116

Query: 1206 QLDFLNYKEPTSIFEHFVIVGLPSDTNLKAVEDAFAKRKTWELQMAKCETFDTKTLQYRG 1027
             LD + Y+EPTS+FEHF+I GL  DTNL+AVEDAFAKRK WELQ    E  D + +++RG
Sbjct: 117  SLDHV-YEEPTSLFEHFIIAGLHPDTNLEAVEDAFAKRKKWELQRKNSE-IDIRMVEHRG 174

Query: 1026 PSYPMLEPQILFKYPRGKKLAMHPKDLPAFCFPEGVKARLMERTPSMSDLNEVVHGQEHL 847
            P+ P+LEPQILFKYP GK+L M  KDL AFCFP GVKA+L+ERTPS+SDLNE+V+GQ HL
Sbjct: 175  PTVPLLEPQILFKYPPGKRLPMRMKDLSAFCFPAGVKAQLLERTPSLSDLNEIVYGQAHL 234

Query: 846  GRDDLSFIFSLKGADNATLYGVCLHVQEIVQRSPGIIGVASPFSRSPGGFSRFLVSAPRC 667
             RDDL+FIFSLK A+N+TLYGVCLHVQEIVQR PG++G+++  S SPG  SRFLVSAPRC
Sbjct: 235  KRDDLAFIFSLKVANNSTLYGVCLHVQEIVQRPPGLLGISTSLSHSPGLSSRFLVSAPRC 294

Query: 666  YCVLTRVPFFELHYEMLNSIVTQERLNRITQFVSEMNITDYIPSPIGTQEDINENNDSPK 487
            YC+LTRVPFFELH+EMLNSI+ QERLNR+TQF+SE+++TD +PS  G + + NEN DS +
Sbjct: 295  YCLLTRVPFFELHFEMLNSIIAQERLNRVTQFISEISLTDSVPS--GPRSNQNENVDSRE 352

Query: 486  REQSKDWTAFAVPVDSXXXXXXXXAGIISDDEVHSYSFRVREPETPESICTSEASDISQA 307
            R+ S DW   A+P+ S        AGIISDDE+ + S ++ EP++PES   S+AS++SQ 
Sbjct: 353  RKSSGDWMTSAIPIHSAVAITAAAAGIISDDEILTSSVKMVEPQSPESCTASDASELSQV 412

Query: 306  KETDKENRKGVQIFDDYSSETLETHSDDFGSYGNGHRSPEV--EFSFGSKGHTIARXXXX 133
            ++    +     ++D  S      + D          S  +  E SF S+ H + R    
Sbjct: 413  RKIKMIDXD--FLYDVLSPRKFSLYLDKLERTNGSCESAHLWSEMSFSSRHHMLERIGSS 470

Query: 132  XXXXXXXXXXXXXXXXXXXXXXXDKNAGNDAIMKWAKEHKNDLL 1
                                   +K  G+D IM+WA+E+K D+L
Sbjct: 471  ESLFSPARCMLSEDEDDDLFPNSEKEFGDDLIMEWARENKYDVL 514


>emb|CBI37205.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  452 bits (1164), Expect = e-124
 Identities = 236/414 (57%), Positives = 291/414 (70%), Gaps = 19/414 (4%)
 Frame = -1

Query: 1335 KWKAQMQRALQRGGHKEEQYRKSSFNPEVLVNQKRQWYQHHSKQLDFLNYKEPTSIFEHF 1156
            +WK+ MQRAL+ G + ++Q  +S+FNPE+L NQKRQWYQ HSK  D  NY+EPTS+FEHF
Sbjct: 30   RWKSHMQRALRWGSNPQDQGSQSTFNPEILANQKRQWYQLHSKTPDNTNYQEPTSLFEHF 89

Query: 1155 VIVGLPSDTNLKAVEDAFAKRKTWELQMAKCETFDTKTLQYRGPSYPMLEPQILFKYPRG 976
            +IVGL SD NL  VEDAFAKRK WE  MA+ E  D K  +  GPS P LEPQILFKYP G
Sbjct: 90   IIVGLHSDANLNIVEDAFAKRKKWESDMAQSEV-DLK--EQWGPSIPTLEPQILFKYPPG 146

Query: 975  KKLAMHPKDLPAFCFPEGVK---------------ARLMERTPSMSDLNEVVHGQEHLGR 841
            KKLA+  KDL AFCFP G+K               AR++ERTPS+SDLNE+V+GQE+LGR
Sbjct: 147  KKLALRMKDLVAFCFPGGIKMVQINTSNSKNCKEKARVLERTPSLSDLNELVYGQEYLGR 206

Query: 840  DDLSFIFSLKGADNATLYGVCLHVQEIVQRSPGIIGVASPFSRSPGGFSRFLVSAPRCYC 661
            DDLSF+FSLK ADNATLYGVCL V EIVQ++P I+G +SP S  PGG   FLVSAPRCYC
Sbjct: 207  DDLSFVFSLKVADNATLYGVCLLVPEIVQKAPAILGASSPLSHRPGGSCHFLVSAPRCYC 266

Query: 660  VLTRVPFFELHYEMLNSIVTQERLNRITQFVSEMNITDYIPSPIGTQEDINENNDSPKRE 481
            +LTR+PFFELHYEMLNSI+ QERLNRIT FV+ +++ D+I S     +  +E +DSP RE
Sbjct: 267  LLTRIPFFELHYEMLNSIIAQERLNRITHFVNLISLPDHISSTSKQHDQTDEKSDSPDRE 326

Query: 480  QSKDWTAFAVPVDSXXXXXXXXAGIISDDEVHSYSFRVREPETPESICTSEASDISQAKE 301
             S DW A+A+P++S        AGIISDDE+ S S R+ EP + ES+  +EASD S+ KE
Sbjct: 327  CSTDWMAYAIPLNSALAVTAAAAGIISDDELPSSSLRMSEPPSTESVTANEASDFSEVKE 386

Query: 300  TDKENRKGVQIFDDYSSETLETHSDD----FGSYGNGHRSPEVEFSFGSKGHTI 151
             DKE  + +Q  D Y+SETLE   D      GSY +G    ++      K HT+
Sbjct: 387  VDKEAGQNLQYLDGYASETLEPQFDGPERMNGSYEHGQTDSDIRTFSCPKKHTL 440


>ref|XP_003553516.1| PREDICTED: uncharacterized protein LOC100814487 [Glycine max]
          Length = 820

 Score =  441 bits (1135), Expect = e-121
 Identities = 245/534 (45%), Positives = 327/534 (61%), Gaps = 6/534 (1%)
 Frame = -1

Query: 1584 METKEECL-EDERPSSPYEVLQHISGEAVRVASEAIQSVYNHNNNIGASNSGNVSPVVGK 1408
            M++KEE    ++RP+SP  VLQ +S  A RVA EA  ++Y+     G S+   + P   +
Sbjct: 1    MDSKEEAEPHEDRPTSPMRVLQQLSEGAFRVAGEAFHNMYSG----GGSSKSQMGPGAHR 56

Query: 1407 LXXXXXXXXXXXXXXXXXXXXXFQKWKAQMQRALQRGGHKEEQYRKSSFNPEVLVNQKRQ 1228
                                  FQK ++ + +A + GG   ++   +SFNPEV+ NQKRQ
Sbjct: 57   ------RSQSELVTRGVERTNSFQKLRSHVHKAWRWGGRFRQEVSPASFNPEVMANQKRQ 110

Query: 1227 WYQHHSKQLDFLNYKEPTSIFEHFVIVGLPSDTNLKAVEDAFAKRKTWELQMAKCETFDT 1048
            WYQ H + L  ++YKEPTS+FEHF+IVGL  D NL+ VE AF +RK WE +  K E  D 
Sbjct: 111  WYQLHPRSLGCVHYKEPTSLFEHFLIVGLHPDANLEDVEHAFVRRKKWEKE--KPEFLDY 168

Query: 1047 KTLQYRGPSYPMLEPQILFKYPRGKKLAMHPKDLPAFCFPEGVKARLMERTPSMSDLNEV 868
            K LQ + P  P LEPQ+LFKYP  KKL M  KDL  FCFPEGVKA L+ERTPS+S+LNE+
Sbjct: 169  KMLQQQRPPEPTLEPQLLFKYPPAKKLTMRMKDLAPFCFPEGVKAWLLERTPSLSELNEL 228

Query: 867  VHGQEHLGRDDLSFIFSLKGADNATLYGVCLHVQEIVQRSPGIIGVASPFSRSPGGFSRF 688
            V+GQEHLG+DDLSF+F++K ADN TLYGVCLHV EIVQR PGI+G++SPFS   G  SRF
Sbjct: 229  VYGQEHLGKDDLSFVFTIKAADNTTLYGVCLHVPEIVQRPPGILGISSPFSHPSGACSRF 288

Query: 687  LVSAPRCYCVLTRVPFFELHYEMLNSIVTQERLNRITQFVSEMNITDYIPSPIGTQEDIN 508
            LVSAPRCYC+LTRVPFFELH+EMLNS++ QERLNRITQF++E+ IT   PS     + ++
Sbjct: 289  LVSAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITQFINEVTITGSTPSTPKLGDQMS 348

Query: 507  ENNDSPKREQSKDWTAFAVPVDSXXXXXXXXAGIISDDEVHSYSFRVREP--ETPESICT 334
             N +SP RE   DW   A+P+D         AGIISDDE+   S ++ +   ++P S+  
Sbjct: 349  SNANSPDRESFSDWMDCAIPLDGAAIITAAAAGIISDDEIIQLSPKIWDSRCQSPVSVTA 408

Query: 333  SEASDISQAKETDKENRKGVQIFDDYSSETLETHSDDFGSYG---NGHRSPEVEFSFGSK 163
            S+ASD  Q ++ DK+ RK +Q  D+ + E  E        +G   N   SP+V   F ++
Sbjct: 409  SDASDYWQVRDVDKDGRKNLQDHDNCAFEAPENLGSIERMHGICENDQVSPKVGTPFSAR 468

Query: 162  GHTIARXXXXXXXXXXXXXXXXXXXXXXXXXXXDKNAGNDAIMKWAKEHKNDLL 1
               + R                            ++ G++ +M+WA E+KNDLL
Sbjct: 469  SRVLERLGSSESLFSPVRSMASDNEEDFFSNNE-RDYGDELLMEWAMENKNDLL 521


>ref|XP_002301838.1| predicted protein [Populus trichocarpa] gi|222843564|gb|EEE81111.1|
            predicted protein [Populus trichocarpa]
          Length = 656

 Score =  439 bits (1130), Expect = e-121
 Identities = 221/349 (63%), Positives = 257/349 (73%)
 Frame = -1

Query: 1263 FNPEVLVNQKRQWYQHHSKQLDFLNYKEPTSIFEHFVIVGLPSDTNLKAVEDAFAKRKTW 1084
            FNPEVL NQKRQWYQ +SK L+   YKEPTS+FEHF++ GL  D NL+ VEDAFA+ K W
Sbjct: 1    FNPEVLANQKRQWYQFNSKSLNHSKYKEPTSLFEHFIVAGLHPDANLEKVEDAFAREKKW 60

Query: 1083 ELQMAKCETFDTKTLQYRGPSYPMLEPQILFKYPRGKKLAMHPKDLPAFCFPEGVKARLM 904
            E  M K    D  ++Q R PS+P LEPQILFKYP GK+LAM  KDL AFCFP GVK RL+
Sbjct: 61   ESDMEKSGLLDFNSMQRRAPSFPTLEPQILFKYPPGKRLAMRSKDLAAFCFPGGVKTRLL 120

Query: 903  ERTPSMSDLNEVVHGQEHLGRDDLSFIFSLKGADNATLYGVCLHVQEIVQRSPGIIGVAS 724
            ERTPS+S+LNE+V+GQEHLGRDD SFIFSLK ADN TLYGVCLHV EIVQR PGI+G  S
Sbjct: 121  ERTPSLSELNELVYGQEHLGRDDFSFIFSLKVADNDTLYGVCLHVTEIVQRPPGILGSQS 180

Query: 723  PFSRSPGGFSRFLVSAPRCYCVLTRVPFFELHYEMLNSIVTQERLNRITQFVSEMNITDY 544
            P S+S G   RFLVSAPRCYCVLTRVPFFELHYEMLNSI+ QERLNRITQFVSEM++T  
Sbjct: 181  PLSQSTGRCCRFLVSAPRCYCVLTRVPFFELHYEMLNSIIAQERLNRITQFVSEMSLTAC 240

Query: 543  IPSPIGTQEDINENNDSPKREQSKDWTAFAVPVDSXXXXXXXXAGIISDDEVHSYSFRVR 364
            +PS       +NEN D   RE   DW A A+PVDS        AGIISDD + + S ++ 
Sbjct: 241  MPSVSKQHGQMNENVDCLDREYDADWMASAIPVDSAVALTAAAAGIISDDVIPTLSPKIW 300

Query: 363  EPETPESICTSEASDISQAKETDKENRKGVQIFDDYSSETLETHSDDFG 217
            EP++P+S+  SEASD SQA+E DK+ RK + + DD   E    H  DFG
Sbjct: 301  EPQSPDSVAASEASDSSQAREVDKDGRKSM-VSDDDDDELFPDHEKDFG 348


>ref|NP_179622.5| DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]
            gi|330251899|gb|AEC06993.1| DENN (AEX-3)
            domain-containing protein [Arabidopsis thaliana]
          Length = 1029

 Score =  438 bits (1127), Expect = e-120
 Identities = 236/453 (52%), Positives = 300/453 (66%), Gaps = 7/453 (1%)
 Frame = -1

Query: 1338 QKWKAQMQRALQRGGHKEEQYRKSSFNPEVLVNQKRQWYQ-HHSKQLDFLNYKEPTSIFE 1162
            Q+ K QMQ+A  RG     +  + +FNPEVL NQKRQWYQ H SK LD    KEP S+FE
Sbjct: 288  QRLKTQMQKAW-RGVSNLREDNRPTFNPEVLANQKRQWYQLHSSKALDQTKLKEPASLFE 346

Query: 1161 HFVIVGLPSDTNLKAVEDAFAKRKTWELQMAKCETFDTKTLQYRGPSYPMLEPQILFKYP 982
            HF+IVGL  +TNL+ VE+AF +RK WE++M++ E  D + L++RGP +P+LEPQILFKYP
Sbjct: 347  HFIIVGLHPETNLRPVEEAFRRRKKWEMEMSRYEVADYRILRHRGPQFPILEPQILFKYP 406

Query: 981  RGKKLAMHPKDLPAFCFPEGVKARLMERTPSMSDLNEVVHGQEHLGRDDLSFIFSLKGAD 802
             GKK+AM PKDL  FCFP GVKARL+ERTPS+SDLNE+V+GQEHLG DD SFIFS K AD
Sbjct: 407  PGKKVAMRPKDLATFCFPGGVKARLLERTPSLSDLNELVYGQEHLGTDDSSFIFSFKVAD 466

Query: 801  NATLYGVCLHVQEIVQRSPGIIGVASPFSRSPGGFSRFLVSAPRCYCVLTRVPFFELHYE 622
            +ATLYGVCLHV EIVQR PG++  ASP   S GG SRFLVSAPRCYC+LTRVPFFELH+E
Sbjct: 467  DATLYGVCLHVSEIVQRPPGVLSTASPL-HSSGGGSRFLVSAPRCYCLLTRVPFFELHFE 525

Query: 621  MLNSIVTQERLNRITQFVSEMNITD--YIPSPIGTQEDINENNDSPKREQSKDWTAFAVP 448
            MLNS++ QERL RIT+FVSEM++    Y+PS     + I+    SP R    DW A A+P
Sbjct: 526  MLNSMIAQERLKRITEFVSEMSLAAACYLPSISRRNDQIDSRVSSP-RSNPDDWMASAIP 584

Query: 447  VDSXXXXXXXXAGIISDDEVHSYSFRVREPETPESICTSEASDISQAKETDKENRKGVQI 268
            VD         AG+I+D ++ +++    EP++P+S+ TS+ SD+SQ KE +++ RK    
Sbjct: 585  VDGVMALTAAAAGLITDSDIANFA----EPQSPDSVVTSDTSDVSQIKEIERDGRKVFHC 640

Query: 267  FDDYSSETLETHSD----DFGSYGNGHRSPEVEFSFGSKGHTIARXXXXXXXXXXXXXXX 100
            +D+ S E  E H D       SY NGH SPEV  S   +   I R               
Sbjct: 641  YDENSPEVFENHLDTPERTSQSYDNGHTSPEVTCS-DPRTQPIER--NESCESVFSSARS 697

Query: 99   XXXXXXXXXXXXDKNAGNDAIMKWAKEHKNDLL 1
                        + + G+D I++WAK+H ND L
Sbjct: 698  VLSDDVDELSNSENDFGDDLILEWAKDHNNDSL 730


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