BLASTX nr result

ID: Coptis24_contig00005956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005956
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173995.1| PREDICTED: uncharacterized protein LOC101229...    43   3e-06
ref|XP_004148373.1| PREDICTED: uncharacterized protein LOC101213...    43   3e-06
ref|XP_002326695.1| predicted protein [Populus trichocarpa] gi|2...    44   6e-06

>ref|XP_004173995.1| PREDICTED: uncharacterized protein LOC101229955 [Cucumis sativus]
          Length = 328

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 26/44 (59%), Positives = 29/44 (65%)
 Frame = -3

Query: 134 RNGQEMKNNTLGNDYSLQTQTGGLVLDQSHIFFNNNNGGLNPRK 3
           RNGQE      G+DYSLQ Q GG  LDQ+H+ FNNN G  N RK
Sbjct: 16  RNGQE------GHDYSLQPQPGGF-LDQTHMVFNNNIGS-NSRK 51



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 259 MAVQAQYPSNVLLLN 215
           MAVQAQYPSNVLLLN
Sbjct: 1   MAVQAQYPSNVLLLN 15


>ref|XP_004148373.1| PREDICTED: uncharacterized protein LOC101213134 [Cucumis sativus]
          Length = 328

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 26/44 (59%), Positives = 29/44 (65%)
 Frame = -3

Query: 134 RNGQEMKNNTLGNDYSLQTQTGGLVLDQSHIFFNNNNGGLNPRK 3
           RNGQE      G+DYSLQ Q GG  LDQ+H+ FNNN G  N RK
Sbjct: 16  RNGQE------GHDYSLQPQPGGF-LDQTHMVFNNNIGS-NSRK 51



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 259 MAVQAQYPSNVLLLN 215
           MAVQAQYPSNVLLLN
Sbjct: 1   MAVQAQYPSNVLLLN 15


>ref|XP_002326695.1| predicted protein [Populus trichocarpa] gi|222834017|gb|EEE72494.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 43.9 bits (102), Expect(2) = 6e-06
 Identities = 26/44 (59%), Positives = 29/44 (65%)
 Frame = -3

Query: 134 RNGQEMKNNTLGNDYSLQTQTGGLVLDQSHIFFNNNNGGLNPRK 3
           RNGQ+      G+DYSLQ Q GG  LDQSH+   NN GG NPRK
Sbjct: 16  RNGQD------GHDYSLQPQPGG-YLDQSHMLL-NNGGGNNPRK 51



 Score = 31.2 bits (69), Expect(2) = 6e-06
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -1

Query: 259 MAVQAQYPSNVLLLN 215
           MAVQAQYPSN LLLN
Sbjct: 1   MAVQAQYPSNALLLN 15


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