BLASTX nr result
ID: Coptis24_contig00005956
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005956 (547 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004173995.1| PREDICTED: uncharacterized protein LOC101229... 43 3e-06 ref|XP_004148373.1| PREDICTED: uncharacterized protein LOC101213... 43 3e-06 ref|XP_002326695.1| predicted protein [Populus trichocarpa] gi|2... 44 6e-06 >ref|XP_004173995.1| PREDICTED: uncharacterized protein LOC101229955 [Cucumis sativus] Length = 328 Score = 43.1 bits (100), Expect(2) = 3e-06 Identities = 26/44 (59%), Positives = 29/44 (65%) Frame = -3 Query: 134 RNGQEMKNNTLGNDYSLQTQTGGLVLDQSHIFFNNNNGGLNPRK 3 RNGQE G+DYSLQ Q GG LDQ+H+ FNNN G N RK Sbjct: 16 RNGQE------GHDYSLQPQPGGF-LDQTHMVFNNNIGS-NSRK 51 Score = 32.7 bits (73), Expect(2) = 3e-06 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -1 Query: 259 MAVQAQYPSNVLLLN 215 MAVQAQYPSNVLLLN Sbjct: 1 MAVQAQYPSNVLLLN 15 >ref|XP_004148373.1| PREDICTED: uncharacterized protein LOC101213134 [Cucumis sativus] Length = 328 Score = 43.1 bits (100), Expect(2) = 3e-06 Identities = 26/44 (59%), Positives = 29/44 (65%) Frame = -3 Query: 134 RNGQEMKNNTLGNDYSLQTQTGGLVLDQSHIFFNNNNGGLNPRK 3 RNGQE G+DYSLQ Q GG LDQ+H+ FNNN G N RK Sbjct: 16 RNGQE------GHDYSLQPQPGGF-LDQTHMVFNNNIGS-NSRK 51 Score = 32.7 bits (73), Expect(2) = 3e-06 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -1 Query: 259 MAVQAQYPSNVLLLN 215 MAVQAQYPSNVLLLN Sbjct: 1 MAVQAQYPSNVLLLN 15 >ref|XP_002326695.1| predicted protein [Populus trichocarpa] gi|222834017|gb|EEE72494.1| predicted protein [Populus trichocarpa] Length = 313 Score = 43.9 bits (102), Expect(2) = 6e-06 Identities = 26/44 (59%), Positives = 29/44 (65%) Frame = -3 Query: 134 RNGQEMKNNTLGNDYSLQTQTGGLVLDQSHIFFNNNNGGLNPRK 3 RNGQ+ G+DYSLQ Q GG LDQSH+ NN GG NPRK Sbjct: 16 RNGQD------GHDYSLQPQPGG-YLDQSHMLL-NNGGGNNPRK 51 Score = 31.2 bits (69), Expect(2) = 6e-06 Identities = 14/15 (93%), Positives = 14/15 (93%) Frame = -1 Query: 259 MAVQAQYPSNVLLLN 215 MAVQAQYPSN LLLN Sbjct: 1 MAVQAQYPSNALLLN 15