BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005841
         (2409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi...   643   0.0  
ref|XP_002532856.1| pentatricopeptide repeat-containing protein,...   622   e-175
ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containi...   621   e-175
ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|2...   612   e-172
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi...   612   e-172

>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
            mitochondrial [Vitis vinifera]
          Length = 550

 Score =  643 bits (1659), Expect = 0.0
 Identities = 313/419 (74%), Positives = 370/419 (88%)
 Frame = -2

Query: 2408 ALEVMEWVIRERPYKLKELDYSYLLEFTFKFHGVWYGESLFSRIPVEFQNDLLYNNLVIA 2229
            ALEVMEWV+RERPY+ KELDYSYLLEFT K HG+  GE LFS +P+EFQN+LLYNNLVIA
Sbjct: 132  ALEVMEWVVRERPYRPKELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIA 191

Query: 2228 CLDQGRIRLSLAYMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPH 2049
            CLD+G IRLSLAYM+KMRE G+PIS+LVFNRLI LHSSP R+K IPRIL QMKADKVA H
Sbjct: 192  CLDKGVIRLSLAYMKKMRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARH 251

Query: 2048 VSTYNILLKIEADGNNIESLTKVFGEMKRANVEPNEITYCILATAHSVARLYSVTEVYVE 1869
            VSTYNIL+KIEA+ +NIE L KVFGEMK+  VEPNE++YC+LATAH+VA+LY+V E YVE
Sbjct: 252  VSTYNILMKIEANEHNIEGLVKVFGEMKQQQVEPNEVSYCLLATAHAVAKLYTVAEAYVE 311

Query: 1868 EIEKSKTGNNWSTLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGR 1689
             +EKS TGNNWSTLDVL+ILYGYLGK  DLERT G++Q+LPHVR KS++LAIEAFGR+G+
Sbjct: 312  AVEKSITGNNWSTLDVLIILYGYLGKPTDLERTWGIVQELPHVRSKSYMLAIEAFGRIGQ 371

Query: 1688 LDRAEELWLEMKSTKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRH 1509
            L+RAEELWLE+KS K+LKSTE FNS+ISVY + G IDKAS +F+EME NGC+ NAITYR+
Sbjct: 372  LNRAEELWLEIKSKKELKSTEQFNSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRN 431

Query: 1508 LTLGCLKAGLVEEALKTLEVGMDQTITSTVKRSTPWLETTLLVVELFADRGDVENVKRLF 1329
            L LGCLKAGL+EEALKTLE+G   TI++ +++S PWLETTL +VE+F++ GDVEN ++LF
Sbjct: 432  LALGCLKAGLLEEALKTLELGKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLF 491

Query: 1328 TELKEARYSRYTFVYNTLIKAHVKAKIYDPELLRKMILGGARPDAVTYSLMKLAEQFRT 1152
             ELK A Y+RYTFVYNTLIKA+VKAK+YDP LLR+MILGGARPDA TYSLMKLAEQF+T
Sbjct: 492  EELKTANYTRYTFVYNTLIKAYVKAKVYDPNLLRRMILGGARPDAETYSLMKLAEQFQT 550


>ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527393|gb|EEF29534.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  622 bits (1605), Expect = e-175
 Identities = 300/419 (71%), Positives = 361/419 (86%)
 Frame = -2

Query: 2408 ALEVMEWVIRERPYKLKELDYSYLLEFTFKFHGVWYGESLFSRIPVEFQNDLLYNNLVIA 2229
            ALEVMEWVIRERPY+ KELDYSYLLEFT K HG+ +GE LF+RIP EFQN+LLYNNLVIA
Sbjct: 103  ALEVMEWVIRERPYRPKELDYSYLLEFTTKLHGISHGEKLFTRIPTEFQNELLYNNLVIA 162

Query: 2228 CLDQGRIRLSLAYMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPH 2049
            CL++G IRLSL YM+KMRE G+PISHL+FNRLI LHSSPGR+K IP+IL QMKADKV  H
Sbjct: 163  CLEKGVIRLSLEYMKKMRELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRH 222

Query: 2048 VSTYNILLKIEADGNNIESLTKVFGEMKRANVEPNEITYCILATAHSVARLYSVTEVYVE 1869
            VSTYNIL+KIEA+ +N+E L KVFGEMKR  VEPNE+++CILA AH+VARLY+V E YVE
Sbjct: 223  VSTYNILMKIEANEHNVEGLIKVFGEMKRLEVEPNEVSFCILAIAHAVARLYTVAEAYVE 282

Query: 1868 EIEKSKTGNNWSTLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGR 1689
             +EKS TG+NWSTLDVL+ILYGYL K   L+R  G +++LPHVR KS++LAIEAFGR+G+
Sbjct: 283  AVEKSYTGDNWSTLDVLIILYGYLRKGKKLDRIWGTVKELPHVRSKSYILAIEAFGRIGQ 342

Query: 1688 LDRAEELWLEMKSTKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRH 1509
            L RAEELWLEMKS K LKSTE FNS++S+YC+ GL+ KA+++F+EM+ NGC+PNAIT+RH
Sbjct: 343  LGRAEELWLEMKSLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRH 402

Query: 1508 LTLGCLKAGLVEEALKTLEVGMDQTITSTVKRSTPWLETTLLVVELFADRGDVENVKRLF 1329
            L LGCLKA LVEEALKTLE+GMD T ++ +K S PWLETT  +VE+FA++GDV N ++ F
Sbjct: 403  LALGCLKAELVEEALKTLEMGMDFTTSNKIKNSIPWLETTFSIVEIFAEKGDVANAEKFF 462

Query: 1328 TELKEARYSRYTFVYNTLIKAHVKAKIYDPELLRKMILGGARPDAVTYSLMKLAEQFRT 1152
             EL +A+Y+RYTFVYNTLIKA+VKAK+Y P LLR+MILGGARPDA TYSL+KL EQF T
Sbjct: 463  EELHKAKYARYTFVYNTLIKAYVKAKVYVPYLLRRMILGGARPDAETYSLIKLIEQFNT 521


>ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
            mitochondrial-like [Glycine max]
          Length = 507

 Score =  621 bits (1602), Expect = e-175
 Identities = 297/419 (70%), Positives = 365/419 (87%)
 Frame = -2

Query: 2408 ALEVMEWVIRERPYKLKELDYSYLLEFTFKFHGVWYGESLFSRIPVEFQNDLLYNNLVIA 2229
            AL+VMEWVIRERPY+ +ELDYSYL+EFT K HG+ +GE LFSRIPVEFQ++LLYNNLVIA
Sbjct: 89   ALQVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIA 148

Query: 2228 CLDQGRIRLSLAYMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPH 2049
            CLD+G I+LSL YM+KMRE G+PISHLVFNRLI LHSSPGR+K IP++L QMKADKV PH
Sbjct: 149  CLDKGVIKLSLEYMKKMRELGFPISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPH 208

Query: 2048 VSTYNILLKIEADGNNIESLTKVFGEMKRANVEPNEITYCILATAHSVARLYSVTEVYVE 1869
            VSTYNIL+KIEA+ +N+E+L KVFG MK A VEPNEI+YCILA AH+VARLY+ TE YVE
Sbjct: 209  VSTYNILMKIEANEHNLENLVKVFGRMKVAQVEPNEISYCILAIAHAVARLYTATEAYVE 268

Query: 1868 EIEKSKTGNNWSTLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGR 1689
             +EKS TGNNWSTLDVLL+LYGYLG + +LER    IQ+LP +R KS++LAIEAFGR+G+
Sbjct: 269  AVEKSITGNNWSTLDVLLMLYGYLGNQKELERVWATIQELPSIRSKSYMLAIEAFGRIGQ 328

Query: 1688 LDRAEELWLEMKSTKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRH 1509
            L+RAEE+WLEMKSTK LKS E FNS++SVYC+ G ID+A++++K M+ +GC+PNAITY  
Sbjct: 329  LNRAEEIWLEMKSTKGLKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQ 388

Query: 1508 LTLGCLKAGLVEEALKTLEVGMDQTITSTVKRSTPWLETTLLVVELFADRGDVENVKRLF 1329
            L LGCLK+G+ E+ALKTL++G+  TI+  V+ STPWLETTL +VE+FA++GDV NV+RLF
Sbjct: 389  LALGCLKSGMAEQALKTLDLGLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLF 448

Query: 1328 TELKEARYSRYTFVYNTLIKAHVKAKIYDPELLRKMILGGARPDAVTYSLMKLAEQFRT 1152
             E  +A+Y RYTFVYNTLIKA+VKAKIY+P LL++MILGGARPDA TYSL+K+AEQF+T
Sbjct: 449  EEFHKAKYCRYTFVYNTLIKAYVKAKIYNPNLLKRMILGGARPDAETYSLLKIAEQFQT 507


>ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|222850589|gb|EEE88136.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score =  612 bits (1579), Expect = e-172
 Identities = 295/418 (70%), Positives = 362/418 (86%)
 Frame = -2

Query: 2408 ALEVMEWVIRERPYKLKELDYSYLLEFTFKFHGVWYGESLFSRIPVEFQNDLLYNNLVIA 2229
            ALEVMEWV+RERPY+LKELDYSYLLEFT K HG+ +GE LF  +P EFQN+LLYNNLVI+
Sbjct: 107  ALEVMEWVVRERPYRLKELDYSYLLEFTTKHHGISHGEKLFLHVPSEFQNELLYNNLVIS 166

Query: 2228 CLDQGRIRLSLAYMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPH 2049
            CL++G IRLSL YM+KMRE G+PIS+L+FNRLI LHSSPG +K IP+ILAQM+ADKV PH
Sbjct: 167  CLEKGVIRLSLDYMKKMREQGHPISYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPH 226

Query: 2048 VSTYNILLKIEADGNNIESLTKVFGEMKRANVEPNEITYCILATAHSVARLYSVTEVYVE 1869
            VSTYNIL+KIEA+ +NI+ L KVF +MKR  VEPNE+++CILATAH+ ARLY+V E YVE
Sbjct: 227  VSTYNILMKIEANEHNIDGLVKVFNDMKRFKVEPNEVSFCILATAHAAARLYTVAEAYVE 286

Query: 1868 EIEKSKTGNNWSTLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGR 1689
             +EKS +G+NWSTLDVL+ILYG+LGKE +LERT G++ +LPHVR KS++LAIEA+G++G+
Sbjct: 287  AVEKSCSGDNWSTLDVLIILYGHLGKEKELERTWGIVLELPHVRSKSYMLAIEAYGKIGQ 346

Query: 1688 LDRAEELWLEMKSTKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRH 1509
            L RAEELWLEMKS   L+STE FNS++SVYC+ GLI KA+  F+EME NGC+ N+IT+RH
Sbjct: 347  LSRAEELWLEMKSIHGLRSTEQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRH 406

Query: 1508 LTLGCLKAGLVEEALKTLEVGMDQTITSTVKRSTPWLETTLLVVELFADRGDVENVKRLF 1329
            L LGCLKA LVEEALKTLE+G + T ++ VK STPWLETTL ++ELFA++GDV NV++LF
Sbjct: 407  LALGCLKANLVEEALKTLEMGKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEKLF 466

Query: 1328 TELKEARYSRYTFVYNTLIKAHVKAKIYDPELLRKMILGGARPDAVTYSLMKLAEQFR 1155
             EL +A+Y R+TFV+N LIKA+VKAKIY P LLR+MILGGARPDA TYSL+KLAEQFR
Sbjct: 467  EELAKAKYIRHTFVFNILIKAYVKAKIYSPNLLRRMILGGARPDAETYSLIKLAEQFR 524


>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
            mitochondrial-like [Cucumis sativus]
            gi|449517541|ref|XP_004165804.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g07590,
            mitochondrial-like [Cucumis sativus]
          Length = 527

 Score =  612 bits (1578), Expect = e-172
 Identities = 296/420 (70%), Positives = 363/420 (86%), Gaps = 1/420 (0%)
 Frame = -2

Query: 2408 ALEVMEWVIRERPYKLKELDYSYLLEFTFKFHGVWYGESLFSRIPVEFQNDLLYNNLVIA 2229
            ALEVMEWVIRE+PY++ ELDYSYLLEFT K HG+  GE LFS IPVEFQ +LL+NNLVIA
Sbjct: 108  ALEVMEWVIREKPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIA 167

Query: 2228 CLDQGRIRLSLAYMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPH 2049
            CLD+G IRLSLAYMRKMRE G+ ISHLVFNRLI LHSS  R+K IP+IL+QMKADKV  H
Sbjct: 168  CLDKGAIRLSLAYMRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLH 227

Query: 2048 VSTYNILLKIEADGNNIESLTKVFGEMKRANVEPNEITYCILATAHSVARLYSVTEVYVE 1869
            VSTYNIL+KIEA+ +NIE L +VF +M+RA VEPNE++YCI+ATAH+VA+LY+V E YVE
Sbjct: 228  VSTYNILMKIEANEHNIEGLMRVFSDMRRAKVEPNEVSYCIVATAHAVAKLYTVVEAYVE 287

Query: 1868 EIEKSKTGNNWSTLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGR 1689
             +EKS  GNNWST DVL+ILYGYL KE +LERT G+IQ  PH+  KSF+LAIEAFGR+G 
Sbjct: 288  ALEKSIAGNNWSTYDVLIILYGYLNKEKELERTWGIIQGFPHIPSKSFILAIEAFGRIGL 347

Query: 1688 LDRAEELWLEMKSTKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRH 1509
            L RAEELWLEMK+ + +K+T+ FNSI+SVYCR GLI KA+E+F+++E NGC+PNAIT+RH
Sbjct: 348  LSRAEELWLEMKTKRGIKATDQFNSILSVYCRHGLIKKATEIFRKIEANGCKPNAITFRH 407

Query: 1508 LTLGCLKAGLVEEALKTLEVGMDQT-ITSTVKRSTPWLETTLLVVELFADRGDVENVKRL 1332
            L  GCLKAGLVEEALKTL++G + T  T  V++STPWLETTL ++E+ A+RGD+EN ++L
Sbjct: 408  LAFGCLKAGLVEEALKTLDLGSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTEKL 467

Query: 1331 FTELKEARYSRYTFVYNTLIKAHVKAKIYDPELLRKMILGGARPDAVTYSLMKLAEQFRT 1152
            F ELKEA+Y+RYTFVYNTLIKA+VKAKI++P LLR+MI+GGARPD+ TYSL+KL+EQF++
Sbjct: 468  FKELKEAKYTRYTFVYNTLIKAYVKAKIHNPNLLRRMIVGGARPDSETYSLIKLSEQFQS 527