BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005786
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553116.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...    91   1e-17
ref|XP_003599919.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...    89   3e-17
ref|XP_003532109.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    89   4e-17
ref|XP_004156117.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    87   1e-16
ref|XP_004140137.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    87   1e-16

>ref|XP_003553116.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA(Gln) amidotransferase
           subunit A-like, partial [Glycine max]
          Length = 506

 Score = 90.5 bits (223), Expect(2) = 1e-17
 Identities = 46/54 (85%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
 Frame = +3

Query: 348 GIKPTYGRVSRFGLMAYASSLDVIGCF-SSVADTAILLEAISGHDIFDATSSKR 506
           G+KPTYGRVSRFGLMAYASSLD IGCF SSVADT ILL AI+GHD FDATSSK+
Sbjct: 194 GLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADTGILLHAIAGHDRFDATSSKQ 247



 Score = 24.6 bits (52), Expect(2) = 1e-17
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 314 VRQPTSFVGVVGNK 355
           VRQP SF GVVG K
Sbjct: 183 VRQPASFCGVVGLK 196


>ref|XP_003599919.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
           gi|355488967|gb|AES70170.1| Glutamyl-tRNA(Gln)
           amidotransferase subunit A [Medicago truncatula]
          Length = 537

 Score = 89.0 bits (219), Expect(2) = 3e-17
 Identities = 45/55 (81%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
 Frame = +3

Query: 348 GIKPTYGRVSRFGLMAYASSLDVIGCF-SSVADTAILLEAISGHDIFDATSSKRK 509
           G+KPTYGRVSRFGLMAYASSLD IGCF SSVAD  ILL AI+GHD FDATSSK++
Sbjct: 226 GLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADAGILLHAIAGHDRFDATSSKQE 280



 Score = 24.6 bits (52), Expect(2) = 3e-17
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 314 VRQPTSFVGVVGNK 355
           VRQP SF GVVG K
Sbjct: 215 VRQPASFCGVVGLK 228


>ref|XP_003532109.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
           [Glycine max]
          Length = 543

 Score = 88.6 bits (218), Expect(2) = 4e-17
 Identities = 45/54 (83%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
 Frame = +3

Query: 348 GIKPTYGRVSRFGLMAYASSLDVIGCF-SSVADTAILLEAISGHDIFDATSSKR 506
           G+KPTYGRVSRFGLMAYASSLD IGCF SSVADT  LL AI+GHD FDATSSK+
Sbjct: 231 GLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADTGTLLHAIAGHDRFDATSSKQ 284



 Score = 24.6 bits (52), Expect(2) = 4e-17
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 314 VRQPTSFVGVVGNK 355
           VRQP SF GVVG K
Sbjct: 220 VRQPASFCGVVGLK 233


>ref|XP_004156117.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 578

 Score = 87.0 bits (214), Expect(2) = 1e-16
 Identities = 44/55 (80%), Positives = 48/55 (87%), Gaps = 1/55 (1%)
 Frame = +3

Query: 348 GIKPTYGRVSRFGLMAYASSLDVIGCFS-SVADTAILLEAISGHDIFDATSSKRK 509
           G+KPTYGRVSRFGLMAYASSLDVIGC S +VAD  ILL +ISGHD  DATSSKR+
Sbjct: 266 GLKPTYGRVSRFGLMAYASSLDVIGCLSTTVADAGILLHSISGHDTLDATSSKRE 320



 Score = 24.6 bits (52), Expect(2) = 1e-16
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 314 VRQPTSFVGVVGNK 355
           VRQP SF GVVG K
Sbjct: 255 VRQPASFCGVVGLK 268


>ref|XP_004140137.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 550

 Score = 87.0 bits (214), Expect(2) = 1e-16
 Identities = 44/55 (80%), Positives = 48/55 (87%), Gaps = 1/55 (1%)
 Frame = +3

Query: 348 GIKPTYGRVSRFGLMAYASSLDVIGCFS-SVADTAILLEAISGHDIFDATSSKRK 509
           G+KPTYGRVSRFGLMAYASSLDVIGC S +VAD  ILL +ISGHD  DATSSKR+
Sbjct: 238 GLKPTYGRVSRFGLMAYASSLDVIGCLSTTVADAGILLHSISGHDTLDATSSKRE 292



 Score = 24.6 bits (52), Expect(2) = 1e-16
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 314 VRQPTSFVGVVGNK 355
           VRQP SF GVVG K
Sbjct: 227 VRQPASFCGVVGLK 240