BLASTX nr result

ID: Coptis24_contig00005780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005780
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49076.1| unknown [Lotus japonicus]                              422   e-115
ref|XP_002265428.1| PREDICTED: uncharacterized zinc finger prote...   419   e-115
gb|ACU24549.1| unknown [Glycine max]                                  416   e-114
ref|XP_003633405.1| PREDICTED: uncharacterized zinc finger prote...   414   e-113
ref|XP_003525002.1| PREDICTED: uncharacterized zinc finger prote...   413   e-113

>gb|AFK49076.1| unknown [Lotus japonicus]
          Length = 375

 Score =  422 bits (1085), Expect = e-115
 Identities = 209/357 (58%), Positives = 235/357 (65%), Gaps = 3/357 (0%)
 Frame = -2

Query: 1363 HSNNNNPFDRRPILKSKAPAHKWVKEWVPQEVVSNGGRCLLLRWXXXXXXXXXXXXXXXX 1184
            H N++  FDRRP LKSKAPA +WVKEWVPQ+V++ GG+C+LLRW                
Sbjct: 5    HFNHSTLFDRRPFLKSKAPAVRWVKEWVPQDVLATGGKCMLLRWVAEDTLKASKEKENEP 64

Query: 1183 XXXXXXXXXXXXL-FLCSYEGCGKTFVDAGALRKHSHIHGERQYICHYEGCGKKFLDSSK 1007
                        + FLCSYEGCGKTF+DAGALRKHSHIHGERQ+ICHYEGCGKKFLDSSK
Sbjct: 65   SGPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFICHYEGCGKKFLDSSK 124

Query: 1006 LKRHFLIHTGERHFVCPHEGCGKAFSLDFNLRAHMRTHSQENYHICPYVDCGKRYAHEYK 827
            LKRHFLIHTGER FVCPHEGCGKAFSLDFNLR+HM+THSQENYHICPY DCGKRYAHEYK
Sbjct: 125  LKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYK 184

Query: 826  LKTHIKAHHEKHTTMDMIIKRTPISEKHTSTPKTPAVAYGSASSDRPYACPYEGCEKAYI 647
            LK H+ +HHEK+ ++++    TP SEK T T K    AY SASSDRPYACPYEGCEKAYI
Sbjct: 185  LKNHVASHHEKNPSLELPKYTTPPSEKQTKTTKPSGGAYTSASSDRPYACPYEGCEKAYI 244

Query: 646  HEYKLNLHFRREHPGHNMEENGKHT-PEIDNDMDEGSDQDAYPAXXXXXXXXXXXXXXXX 470
            HEYKL LH +REHPGH  EEN  H     DN+MDE SDQDAY                  
Sbjct: 245  HEYKLKLHLKREHPGHMSEENAVHALANADNEMDEASDQDAYGGVKRSNGKSQKQSKPKP 304

Query: 469  XXXXXXXXXXXXXSV-APTNLMNVVKQQWPVKXXXXXXXXXXXXXXXXXXXDGWRNA 302
                         S   P+  +NV+K+ WPVK                   DGWR A
Sbjct: 305  NLKLPPSKMARKGSAPTPSAPLNVIKKPWPVKQETYDEDSEETEEDRDNVEDGWRYA 361


>ref|XP_002265428.1| PREDICTED: uncharacterized zinc finger protein At4g06634-like isoform
            1 [Vitis vinifera]
          Length = 372

 Score =  419 bits (1078), Expect = e-115
 Identities = 207/335 (61%), Positives = 236/335 (70%), Gaps = 3/335 (0%)
 Frame = -2

Query: 1372 MDLHSNNNNPFDRRPILKSKAPAHKWVKEWVPQEVVSNGGRCLLLRWXXXXXXXXXXXXX 1193
            MD HSN +  F+RRPI+KSK PA KWVKEWVPQ++V+ GG+CL+ +W             
Sbjct: 1    MDAHSNYHL-FERRPIVKSKTPAVKWVKEWVPQDLVATGGKCLVYKWVTEDTLKALKEKA 59

Query: 1192 XXXXXXXXXXXXXXXL-FLCSYEGCGKTFVDAGALRKHSHIHGERQYICHYEGCGKKFLD 1016
                           + FLCSYEGCGKTF+DAGALRKHSHIHGERQY+CHYEGCGKKFLD
Sbjct: 60   KEPQAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQYVCHYEGCGKKFLD 119

Query: 1015 SSKLKRHFLIHTGERHFVCPHEGCGKAFSLDFNLRAHMRTHSQENYHICPYVDCGKRYAH 836
            SSKLKRHFLIHTGER FVCPHEGCGKAFSLDFNLR+HM+THSQENYHICPY DCGKRYAH
Sbjct: 120  SSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAH 179

Query: 835  EYKLKTHIKAHHEKHTTMDMIIKRTPISEKHTSTPKTPAVAYGSASSDRPYACPYEGCEK 656
            EYKLK HI +HHEK++ MD + K  P +EK T TPK     YGSA+SDRPY+CPYEGCEK
Sbjct: 180  EYKLKNHIMSHHEKNSVMD-VPKYVPPAEKLTKTPKPSGGVYGSAASDRPYSCPYEGCEK 238

Query: 655  AYIHEYKLNLHFRREHPGHNMEENGKHT-PEIDNDMDEGSDQDAYPA-XXXXXXXXXXXX 482
            +YIHEYKL LH RREHPGH  +EN ++    IDN+ DEGSDQDAY               
Sbjct: 239  SYIHEYKLKLHLRREHPGHISDENAENAQANIDNEPDEGSDQDAYVGKRGNGKSQKASKA 298

Query: 481  XXXXXXXXXXXXXXXXXSVAPTNLMNVVKQQWPVK 377
                             + AP NL NV+K+QWPVK
Sbjct: 299  KSSLKMPPSKVTQRKASNPAPANL-NVIKKQWPVK 332


>gb|ACU24549.1| unknown [Glycine max]
          Length = 371

 Score =  416 bits (1069), Expect = e-114
 Identities = 193/287 (67%), Positives = 223/287 (77%), Gaps = 2/287 (0%)
 Frame = -2

Query: 1372 MDLHSNNNNPFDRRPILKSKAPAHKWVKEWVPQEVVSNGGRCLLLRWXXXXXXXXXXXXX 1193
            M++H +N+  F+RRPILKSKA A KWVKEWVPQ++V+ GG+C++L+W             
Sbjct: 1    MEIHYSNSY-FERRPILKSKAAAVKWVKEWVPQDLVTTGGKCMILKWVTEDTLKTLKEKV 59

Query: 1192 XXXXXXXXXXXXXXXL-FLCSYEGCGKTFVDAGALRKHSHIHGERQYICHYEGCGKKFLD 1016
                           + FLCSY+GCGKTF+DAGALRKHSHIHGERQY+CHY+GCGKKFLD
Sbjct: 60   KEPSVPEPEPEPTTEVLFLCSYDGCGKTFIDAGALRKHSHIHGERQYVCHYDGCGKKFLD 119

Query: 1015 SSKLKRHFLIHTGERHFVCPHEGCGKAFSLDFNLRAHMRTHSQENYHICPYVDCGKRYAH 836
            SSKLKRHFLIHTGER FVCPHEGCGKAFSLDFNLR+HM+THSQENYHICPY DCGKRYAH
Sbjct: 120  SSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAH 179

Query: 835  EYKLKTHIKAHHEKHTTMDMIIKRTPISEKHTSTPKTPAVAYGSASSDRPYACPYEGCEK 656
            EYKLK HI +HHEK+ ++D+    TP SEK T TPK    AYGSASSDRPYACPY+GCEK
Sbjct: 180  EYKLKNHIASHHEKNASVDVTKYTTPPSEKQTKTPKPSGGAYGSASSDRPYACPYDGCEK 239

Query: 655  AYIHEYKLNLHFRREHPGHNMEENGKHT-PEIDNDMDEGSDQDAYPA 518
            AYIHEYKL LH +REHPG   +EN +H    +DN+MDE SD DAY A
Sbjct: 240  AYIHEYKLRLHLKREHPGLMADENAEHAQANVDNEMDEASDHDAYVA 286


>ref|XP_003633405.1| PREDICTED: uncharacterized zinc finger protein At4g06634-like isoform
            2 [Vitis vinifera] gi|297739551|emb|CBI29733.3| unnamed
            protein product [Vitis vinifera]
          Length = 371

 Score =  414 bits (1065), Expect = e-113
 Identities = 207/335 (61%), Positives = 235/335 (70%), Gaps = 3/335 (0%)
 Frame = -2

Query: 1372 MDLHSNNNNPFDRRPILKSKAPAHKWVKEWVPQEVVSNGGRCLLLRWXXXXXXXXXXXXX 1193
            MD HSN +  F+RRPI+KSK PA KWVKEWVPQ++V+ GG+CL+ +W             
Sbjct: 1    MDAHSNYHL-FERRPIVKSKTPAVKWVKEWVPQDLVATGGKCLVYKWVTEDTLKALKEKA 59

Query: 1192 XXXXXXXXXXXXXXXL-FLCSYEGCGKTFVDAGALRKHSHIHGERQYICHYEGCGKKFLD 1016
                           + FLCSYEGCGKTF+DAGALRKHSHIHGERQY+CHYEGCGKKFLD
Sbjct: 60   KEPQAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQYVCHYEGCGKKFLD 119

Query: 1015 SSKLKRHFLIHTGERHFVCPHEGCGKAFSLDFNLRAHMRTHSQENYHICPYVDCGKRYAH 836
            SSKLKRHFLIHTGER FVCPHEGCGKAFSLDFNLR+HM+THSQENYHICPY DCGKRYAH
Sbjct: 120  SSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAH 179

Query: 835  EYKLKTHIKAHHEKHTTMDMIIKRTPISEKHTSTPKTPAVAYGSASSDRPYACPYEGCEK 656
            EYKLK HI +HHEK + MD + K  P +EK T TPK     YGSA+SDRPY+CPYEGCEK
Sbjct: 180  EYKLKNHIMSHHEK-SVMD-VPKYVPPAEKLTKTPKPSGGVYGSAASDRPYSCPYEGCEK 237

Query: 655  AYIHEYKLNLHFRREHPGHNMEENGKHT-PEIDNDMDEGSDQDAYPA-XXXXXXXXXXXX 482
            +YIHEYKL LH RREHPGH  +EN ++    IDN+ DEGSDQDAY               
Sbjct: 238  SYIHEYKLKLHLRREHPGHISDENAENAQANIDNEPDEGSDQDAYVGKRGNGKSQKASKA 297

Query: 481  XXXXXXXXXXXXXXXXXSVAPTNLMNVVKQQWPVK 377
                             + AP NL NV+K+QWPVK
Sbjct: 298  KSSLKMPPSKVTQRKASNPAPANL-NVIKKQWPVK 331


>ref|XP_003525002.1| PREDICTED: uncharacterized zinc finger protein At4g06634-like
            [Glycine max]
          Length = 371

 Score =  413 bits (1061), Expect = e-113
 Identities = 192/287 (66%), Positives = 222/287 (77%), Gaps = 2/287 (0%)
 Frame = -2

Query: 1372 MDLHSNNNNPFDRRPILKSKAPAHKWVKEWVPQEVVSNGGRCLLLRWXXXXXXXXXXXXX 1193
            M++H +N+  F+RRPILKSKA A KWVKEWVPQ++V+ GG+C++L+W             
Sbjct: 1    MEIHYSNSY-FERRPILKSKAAAVKWVKEWVPQDLVTTGGKCMILKWVTEDTLKTLKEKV 59

Query: 1192 XXXXXXXXXXXXXXXL-FLCSYEGCGKTFVDAGALRKHSHIHGERQYICHYEGCGKKFLD 1016
                           + FLCSY+GCGKTF+DAGALRKHSHIHGERQY+CHY+GCGKKFLD
Sbjct: 60   KEPSVPEPEPEPTTEVLFLCSYDGCGKTFIDAGALRKHSHIHGERQYVCHYDGCGKKFLD 119

Query: 1015 SSKLKRHFLIHTGERHFVCPHEGCGKAFSLDFNLRAHMRTHSQENYHICPYVDCGKRYAH 836
            SSKLKRHFLIHTGER FVCPHEGCGKAFSLDFNLR+HM+THSQENYHICPY DCGKRYAH
Sbjct: 120  SSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAH 179

Query: 835  EYKLKTHIKAHHEKHTTMDMIIKRTPISEKHTSTPKTPAVAYGSASSDRPYACPYEGCEK 656
            EYKLK HI +HHEK+ ++D+    TP SEK T T K    AYGSASSDRPYACPY+GCEK
Sbjct: 180  EYKLKNHIASHHEKNASVDVTKYTTPPSEKQTKTSKPSGGAYGSASSDRPYACPYDGCEK 239

Query: 655  AYIHEYKLNLHFRREHPGHNMEENGKHT-PEIDNDMDEGSDQDAYPA 518
            AYIHEYKL LH +REHPG   +EN +H    +DN+MDE SD DAY A
Sbjct: 240  AYIHEYKLRLHLKREHPGLMADENAEHAQANVDNEMDEASDHDAYVA 286


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