BLASTX nr result

ID: Coptis24_contig00005756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005756
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515411.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_004145581.1| PREDICTED: uncharacterized protein LOC101212...    58   1e-06
emb|CAN79208.1| hypothetical protein VITISV_025934 [Vitis vinifera]    58   1e-06
ref|XP_003631800.1| PREDICTED: uncharacterized protein LOC100266...    57   1e-06
emb|CBI21156.3| unnamed protein product [Vitis vinifera]               57   1e-06

>ref|XP_002515411.1| conserved hypothetical protein [Ricinus communis]
           gi|223545355|gb|EEF46860.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 766

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
 Frame = -1

Query: 478 SSGERVRTMCTPLMDRFFIDL-IDHVHRGNTTDHAF*KLLWVPMTAF------SIISSDI 320
           +S +R RT  TP M+RFF+DL ++H+HRGN   H F K  W+ M A       S    D+
Sbjct: 10  TSSDRSRTYWTPTMERFFVDLMLEHMHRGNRIGHTFNKQAWMDMLAMFNAKFGSQYDKDV 69

Query: 319 NTKRMF*KISVEV*VGITMK*QQFS-IKT-----GFHCRGVRKMLLADDSVWDDNKVMQV 158
              R             T   +QF+ +KT     GF     R+M++ADD VW  N  ++V
Sbjct: 70  LKSR------------YTNLWKQFNDVKTLLGQSGFTWDETREMVVADDYVW--NAYLKV 115

Query: 157 HPEIRSHRT 131
           HP+ RS+R+
Sbjct: 116 HPDARSYRS 124



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
 Frame = -1

Query: 520 KTSSSAQNL*LRDESSGERVRTMCTPLMDRFFID-LIDHVHRGNTTDHAF*KLLWVPMTA 344
           KT +++Q L     S+ +R RT  TP MDR+ ID L++ VHRGN     F    W  M A
Sbjct: 327 KTGNASQTL-----SNNDRTRTYWTPPMDRYLIDLLLEQVHRGNKLGQTFISQAWTDMVA 381

Query: 343 FSIISSDINTKRMF*KISVEV*VGITMK*QQFSIKTGFHCRGVRKMLLADDSVWDDNKVM 164
              +    +  +   K   +    +    +     +GF     R+M+ A+D VWD     
Sbjct: 382 SFNVKFQSHHDKDVLKNRYKHLRRMYSDIKNLLENSGFSWDSTREMITAEDHVWD--AYT 439

Query: 163 QVHPEIRSHR 134
           + HP+ RS+R
Sbjct: 440 KAHPDARSYR 449


>ref|XP_004145581.1| PREDICTED: uncharacterized protein LOC101212813 [Cucumis sativus]
           gi|449515081|ref|XP_004164578.1| PREDICTED:
           uncharacterized LOC101212813 [Cucumis sativus]
          Length = 767

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
 Frame = -1

Query: 475 SGERVRTMCTPLMDRFFIDL-IDHVHRGNTTDHAF*KLLWVPMTAFSIISSDINTKRMF* 299
           S ER RT  TP+M+R+FIDL ++ +HRGN + H F K  W  M          NTK    
Sbjct: 8   SHERSRTYWTPVMERYFIDLMLEQLHRGNRSGHTFNKQAWTDMLTM------FNTKFGSQ 61

Query: 298 KISVEV*VGITMK*QQFS-IK-----TGFHCRGVRKMLLADDSVWDDNKVMQVHPEIRSH 137
                +    T   +QF+ +K     +GF     R+M++ADD VWD    ++ HP+ RS+
Sbjct: 62  YDKDVLKSRYTNLWKQFNDVKNLLGHSGFSWDEGRQMVIADDYVWD--IYIKAHPDARSY 119

Query: 136 RT 131
           +T
Sbjct: 120 KT 121


>emb|CAN79208.1| hypothetical protein VITISV_025934 [Vitis vinifera]
          Length = 497

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
 Frame = -1

Query: 478 SSGERVRTMCTPLMDRFFIDL-IDHVHRGNTTDHAF*KLLWVPMTAF------SIISSDI 320
           +S +R RT  TP M+R+FIDL +D +HRG+   H F K  W  M         S    D+
Sbjct: 7   TSNDRSRTYWTPTMERYFIDLMLDQMHRGSRIGHTFNKQAWTDMLTMFNAKFGSQYDKDV 66

Query: 319 NTKRMF*KISVEV*VGITMK*QQFSI------KTGFHCRGVRKMLLADDSVWD-----DN 173
              R             T   +QF+       ++GF     R+M++ADD VWD     + 
Sbjct: 67  LKGR------------YTNLWKQFNDIKNLLGQSGFSWDETRQMVVADDDVWDAYIKTNT 114

Query: 172 KVMQVHPEIRSHRT 131
              Q HP+ RS++T
Sbjct: 115 NFXQFHPDARSYKT 128


>ref|XP_003631800.1| PREDICTED: uncharacterized protein LOC100266462 [Vitis vinifera]
          Length = 771

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
 Frame = -1

Query: 478 SSGERVRTMCTPLMDRFFIDL-IDHVHRGNTTDHAF*KLLWVPMTAF------SIISSDI 320
           +S +R RT  TP M+R+FIDL +D +HRG+   H F K  W  M         S    D+
Sbjct: 7   TSNDRSRTYWTPTMERYFIDLMLDQMHRGSRIGHTFNKQAWTDMLTMFNAKFGSQYDKDV 66

Query: 319 NTKRMF*KISVEV*VGITMK*QQFSI------KTGFHCRGVRKMLLADDSVWDDNKVMQV 158
              R             T   +QF+       ++GF     R+M++ADD VWD    ++ 
Sbjct: 67  LKGR------------YTNLWKQFNDIKNLLGQSGFSWDETRQMVVADDDVWD--AYIKF 112

Query: 157 HPEIRSHRT 131
           HP+ RS++T
Sbjct: 113 HPDARSYKT 121


>emb|CBI21156.3| unnamed protein product [Vitis vinifera]
          Length = 809

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
 Frame = -1

Query: 478 SSGERVRTMCTPLMDRFFIDL-IDHVHRGNTTDHAF*KLLWVPMTAF------SIISSDI 320
           +S +R RT  TP M+R+FIDL +D +HRG+   H F K  W  M         S    D+
Sbjct: 7   TSNDRSRTYWTPTMERYFIDLMLDQMHRGSRIGHTFNKQAWTDMLTMFNAKFGSQYDKDV 66

Query: 319 NTKRMF*KISVEV*VGITMK*QQFSI------KTGFHCRGVRKMLLADDSVWDDNKVMQV 158
              R             T   +QF+       ++GF     R+M++ADD VWD    ++ 
Sbjct: 67  LKGR------------YTNLWKQFNDIKNLLGQSGFSWDETRQMVVADDDVWD--AYIKF 112

Query: 157 HPEIRSHRT 131
           HP+ RS++T
Sbjct: 113 HPDARSYKT 121


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