BLASTX nr result
ID: Coptis24_contig00005753
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005753 (828 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK43113.1| unknown [Lotus japonicus] 87 5e-15 ref|XP_002299239.1| predicted protein [Populus trichocarpa] gi|2... 87 6e-15 ref|NP_001239870.1| uncharacterized protein LOC100791084 [Glycin... 86 1e-14 ref|XP_002467545.1| hypothetical protein SORBIDRAFT_01g030010 [S... 82 1e-13 ref|XP_003610904.1| Succinate dehydrogenase assembly factor-like... 82 2e-13 >gb|AFK43113.1| unknown [Lotus japonicus] Length = 91 Score = 87.0 bits (214), Expect = 5e-15 Identities = 43/78 (55%), Positives = 54/78 (69%) Frame = +1 Query: 100 MKRLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLL 279 ++RL+G+QKQVL+LY GFL VS+EF RN+KEVDRKNF+YIEYLL Sbjct: 3 VQRLSGMQKQVLSLYRGFLRAARSKSEEERRNMESIVSQEFRRNSKEVDRKNFLYIEYLL 62 Query: 280 RRGAKQLHQLKSPNTISM 333 RRG +QL QLK+P T + Sbjct: 63 RRGTRQLDQLKNPGTTGL 80 >ref|XP_002299239.1| predicted protein [Populus trichocarpa] gi|222846497|gb|EEE84044.1| predicted protein [Populus trichocarpa] Length = 100 Score = 86.7 bits (213), Expect = 6e-15 Identities = 44/76 (57%), Positives = 51/76 (67%) Frame = +1 Query: 106 RLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLLRR 285 RL+G+QKQVL LY GFL VS EF RN+K+VDRKNFIYIEYLLRR Sbjct: 10 RLSGMQKQVLTLYRGFLRAARSKSPEDRRQIESFVSAEFRRNSKQVDRKNFIYIEYLLRR 69 Query: 286 GAKQLHQLKSPNTISM 333 G KQL QL SP+T+ + Sbjct: 70 GKKQLEQLNSPDTVGL 85 >ref|NP_001239870.1| uncharacterized protein LOC100791084 [Glycine max] gi|255637377|gb|ACU19017.1| unknown [Glycine max] Length = 97 Score = 85.5 bits (210), Expect = 1e-14 Identities = 42/78 (53%), Positives = 54/78 (69%) Frame = +1 Query: 100 MKRLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLL 279 ++RL+G+QKQVL+LY GFL +S+EF RNA++VDRKNF+YIEYLL Sbjct: 6 VQRLSGMQKQVLSLYRGFLRAARSKSEEERCKIESIISQEFRRNAEDVDRKNFLYIEYLL 65 Query: 280 RRGAKQLHQLKSPNTISM 333 RRG KQL QLK+P T + Sbjct: 66 RRGNKQLDQLKNPGTTGL 83 >ref|XP_002467545.1| hypothetical protein SORBIDRAFT_01g030010 [Sorghum bicolor] gi|241921399|gb|EER94543.1| hypothetical protein SORBIDRAFT_01g030010 [Sorghum bicolor] Length = 88 Score = 82.0 bits (201), Expect = 1e-13 Identities = 41/78 (52%), Positives = 51/78 (65%) Frame = +1 Query: 106 RLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLLRR 285 +L+G+QKQVLALY GFL VS EFH NA+ VDR+NF++IEYLLRR Sbjct: 6 KLSGIQKQVLALYRGFLRTARLKAPEERRRIESVVSAEFHENARSVDRRNFVHIEYLLRR 65 Query: 286 GAKQLHQLKSPNTISMFT 339 G KQL QLK+P+ + T Sbjct: 66 GKKQLEQLKNPDITGLAT 83 >ref|XP_003610904.1| Succinate dehydrogenase assembly factor-like protein [Medicago truncatula] gi|355512239|gb|AES93862.1| Succinate dehydrogenase assembly factor-like protein [Medicago truncatula] Length = 93 Score = 81.6 bits (200), Expect = 2e-13 Identities = 42/78 (53%), Positives = 51/78 (65%) Frame = +1 Query: 100 MKRLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLL 279 ++RL+G+QKQVL+LY GFL VS+EF N+KEVDRKNF YIEYLL Sbjct: 6 VQRLSGMQKQVLSLYRGFLRAARSKPDQERRNIESIVSQEFRHNSKEVDRKNFQYIEYLL 65 Query: 280 RRGAKQLHQLKSPNTISM 333 RRG KQL QL +P T + Sbjct: 66 RRGHKQLDQLNNPGTTGL 83