BLASTX nr result

ID: Coptis24_contig00005753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005753
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43113.1| unknown [Lotus japonicus]                               87   5e-15
ref|XP_002299239.1| predicted protein [Populus trichocarpa] gi|2...    87   6e-15
ref|NP_001239870.1| uncharacterized protein LOC100791084 [Glycin...    86   1e-14
ref|XP_002467545.1| hypothetical protein SORBIDRAFT_01g030010 [S...    82   1e-13
ref|XP_003610904.1| Succinate dehydrogenase assembly factor-like...    82   2e-13

>gb|AFK43113.1| unknown [Lotus japonicus]
          Length = 91

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 43/78 (55%), Positives = 54/78 (69%)
 Frame = +1

Query: 100 MKRLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLL 279
           ++RL+G+QKQVL+LY GFL                 VS+EF RN+KEVDRKNF+YIEYLL
Sbjct: 3   VQRLSGMQKQVLSLYRGFLRAARSKSEEERRNMESIVSQEFRRNSKEVDRKNFLYIEYLL 62

Query: 280 RRGAKQLHQLKSPNTISM 333
           RRG +QL QLK+P T  +
Sbjct: 63  RRGTRQLDQLKNPGTTGL 80


>ref|XP_002299239.1| predicted protein [Populus trichocarpa] gi|222846497|gb|EEE84044.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 44/76 (57%), Positives = 51/76 (67%)
 Frame = +1

Query: 106 RLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLLRR 285
           RL+G+QKQVL LY GFL                 VS EF RN+K+VDRKNFIYIEYLLRR
Sbjct: 10  RLSGMQKQVLTLYRGFLRAARSKSPEDRRQIESFVSAEFRRNSKQVDRKNFIYIEYLLRR 69

Query: 286 GAKQLHQLKSPNTISM 333
           G KQL QL SP+T+ +
Sbjct: 70  GKKQLEQLNSPDTVGL 85


>ref|NP_001239870.1| uncharacterized protein LOC100791084 [Glycine max]
           gi|255637377|gb|ACU19017.1| unknown [Glycine max]
          Length = 97

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 42/78 (53%), Positives = 54/78 (69%)
 Frame = +1

Query: 100 MKRLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLL 279
           ++RL+G+QKQVL+LY GFL                 +S+EF RNA++VDRKNF+YIEYLL
Sbjct: 6   VQRLSGMQKQVLSLYRGFLRAARSKSEEERCKIESIISQEFRRNAEDVDRKNFLYIEYLL 65

Query: 280 RRGAKQLHQLKSPNTISM 333
           RRG KQL QLK+P T  +
Sbjct: 66  RRGNKQLDQLKNPGTTGL 83


>ref|XP_002467545.1| hypothetical protein SORBIDRAFT_01g030010 [Sorghum bicolor]
           gi|241921399|gb|EER94543.1| hypothetical protein
           SORBIDRAFT_01g030010 [Sorghum bicolor]
          Length = 88

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 41/78 (52%), Positives = 51/78 (65%)
 Frame = +1

Query: 106 RLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLLRR 285
           +L+G+QKQVLALY GFL                 VS EFH NA+ VDR+NF++IEYLLRR
Sbjct: 6   KLSGIQKQVLALYRGFLRTARLKAPEERRRIESVVSAEFHENARSVDRRNFVHIEYLLRR 65

Query: 286 GAKQLHQLKSPNTISMFT 339
           G KQL QLK+P+   + T
Sbjct: 66  GKKQLEQLKNPDITGLAT 83


>ref|XP_003610904.1| Succinate dehydrogenase assembly factor-like protein [Medicago
           truncatula] gi|355512239|gb|AES93862.1| Succinate
           dehydrogenase assembly factor-like protein [Medicago
           truncatula]
          Length = 93

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 42/78 (53%), Positives = 51/78 (65%)
 Frame = +1

Query: 100 MKRLTGLQKQVLALYGGFLXXXXXXXXXXXXXXXXXVSEEFHRNAKEVDRKNFIYIEYLL 279
           ++RL+G+QKQVL+LY GFL                 VS+EF  N+KEVDRKNF YIEYLL
Sbjct: 6   VQRLSGMQKQVLSLYRGFLRAARSKPDQERRNIESIVSQEFRHNSKEVDRKNFQYIEYLL 65

Query: 280 RRGAKQLHQLKSPNTISM 333
           RRG KQL QL +P T  +
Sbjct: 66  RRGHKQLDQLNNPGTTGL 83


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