BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005688
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...    94   9e-18
emb|CBI23047.3| unnamed protein product [Vitis vinifera]               94   9e-18
gb|AEZ00900.1| putative RNA recognition motif-containing protein...    90   2e-16
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...    77   2e-12
ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [S...    74   1e-11

>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
 Frame = -2

Query: 204 GESGRSLGGGMIGHPADDMRMSGVRGFDPMGG-KSQNIGISGGKPEIPLPADASNTLFVE 28
           G+SGR L GG+  HP DD R+ GVRG D     KSQ++G SGG+PE+PLP DAS+TLFVE
Sbjct: 76  GDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVE 135

Query: 27  GLPGNCTRR 1
           GLP NCTRR
Sbjct: 136 GLPANCTRR 144


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
 Frame = -2

Query: 204 GESGRSLGGGMIGHPADDMRMSGVRGFDPMGG-KSQNIGISGGKPEIPLPADASNTLFVE 28
           G+SGR L GG+  HP DD R+ GVRG D     KSQ++G SGG+PE+PLP DAS+TLFVE
Sbjct: 77  GDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVE 136

Query: 27  GLPGNCTRR 1
           GLP NCTRR
Sbjct: 137 GLPANCTRR 145


>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
           guineensis]
          Length = 294

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/82 (56%), Positives = 53/82 (64%), Gaps = 14/82 (17%)
 Frame = -2

Query: 204 GESGRSLGGGMIGHPADDMRMSGVRGFD-------------PMGGKS-QNIGISGGKPEI 67
           GES R++ GGM GHP DD RM GV G D             P+GG   +++G  GG+PE 
Sbjct: 114 GESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGGRPEPPLGGMDGRSVGYGGGRPEP 173

Query: 66  PLPADASNTLFVEGLPGNCTRR 1
           PLP DASNTLFVEGLP NCTRR
Sbjct: 174 PLPQDASNTLFVEGLPANCTRR 195


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = -2

Query: 204 GESGRSLGGGMIGHPADDMRMSGVRGFDPMGG-KSQNIGISGGKPEIPLPADASNTLFVE 28
           G+S R + GGM     DD R+ G+   +P    K + +G  GG+PE+PLP DAS+TLFVE
Sbjct: 80  GQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYGGGRPEVPLPPDASSTLFVE 139

Query: 27  GLPGNCTRR 1
           GLP NCTRR
Sbjct: 140 GLPSNCTRR 148


>ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
           gi|241914611|gb|EER87755.1| hypothetical protein
           SORBIDRAFT_10g001660 [Sorghum bicolor]
          Length = 266

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/68 (54%), Positives = 42/68 (61%)
 Frame = -2

Query: 204 GESGRSLGGGMIGHPADDMRMSGVRGFDPMGGKSQNIGISGGKPEIPLPADASNTLFVEG 25
           GE  R   GG  G+P DD  M   RG D     S+NIG  GG PE PLP DASNTL++EG
Sbjct: 116 GEPIRPAVGGNAGYPVDDRSMMAARGMD-----SRNIGFGGGMPEPPLPPDASNTLYIEG 170

Query: 24  LPGNCTRR 1
           +P  CTRR
Sbjct: 171 IPTGCTRR 178