BLASTX nr result

ID: Coptis24_contig00005686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005686
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B9GIE4.2|CSPL5_POPTR RecName: Full=CASP-like protein POPTRDRA...   165   1e-38
ref|XP_002529882.1| conserved hypothetical protein [Ricinus comm...   163   4e-38
ref|XP_002317067.1| predicted protein [Populus trichocarpa] gi|3...   160   4e-37
ref|XP_002300491.1| predicted protein [Populus trichocarpa] gi|2...   155   1e-35
gb|AAM64457.1| unknown [Arabidopsis thaliana]                         154   2e-35

>sp|B9GIE4.2|CSPL5_POPTR RecName: Full=CASP-like protein POPTRDRAFT_798217
          Length = 199

 Score =  165 bits (417), Expect = 1e-38
 Identities = 84/176 (47%), Positives = 110/176 (62%)
 Frame = -3

Query: 775 RSWIILVLRLLALCGTVSATLVMALNKEXXXXXXXXXXXTPIKASIQAKFQHTPAFVFFV 596
           R W++L+LR+LA   T +AT+VM LNKE           TPIKAS+ AKFQHTPAFVFFV
Sbjct: 21  RKWVLLMLRVLAFFATAAATVVMGLNKETKTLVVATVGSTPIKASLTAKFQHTPAFVFFV 80

Query: 595 IANSVGSLHNLLMLAVDLFGYKYDFKGFRLLTTTLLDMGXXXXXXXXXXXXXXXSELGKN 416
           IAN + S+HNL+M+  DLFG K D+KG RL    +LD+                +ELGKN
Sbjct: 81  IANGLASIHNLVMIMGDLFGQKLDYKGLRLAMIAILDIMTVALVSGGVSAAAFMAELGKN 140

Query: 415 GNTHARWNKICDRFGTYCDHXXXXXXXXXXXIVFLMALNVLSIIALHKKSKYQSAV 248
           GN+HARWNKICD+F T+CDH           ++ ++ ++V+SII L  K K  S +
Sbjct: 141 GNSHARWNKICDKFETFCDHGGGALIASFAGLILMLIISVMSIIKLLIKPKPDSTI 196


>ref|XP_002529882.1| conserved hypothetical protein [Ricinus communis]
           gi|288558966|sp|B9SV63.1|CSPLC_RICCO RecName:
           Full=CASP-like protein RCOM_0770240
           gi|223530609|gb|EEF32485.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  163 bits (413), Expect = 4e-38
 Identities = 79/168 (47%), Positives = 110/168 (65%)
 Frame = -3

Query: 775 RSWIILVLRLLALCGTVSATLVMALNKEXXXXXXXXXXXTPIKASIQAKFQHTPAFVFFV 596
           +SW++L+LR +A   T +AT+VMA N+E           TPIKA++ AKFQHTPAFVFFV
Sbjct: 23  KSWVLLMLRFVAFLATAAATIVMAANRETKTFVVATIGSTPIKATVTAKFQHTPAFVFFV 82

Query: 595 IANSVGSLHNLLMLAVDLFGYKYDFKGFRLLTTTLLDMGXXXXXXXXXXXXXXXSELGKN 416
           IAN +GS+HNL+M+A D F  K+D+KG R +T  +LDM                +ELGKN
Sbjct: 83  IANGMGSIHNLVMIAGDTFVRKFDYKGLRWVTVAILDMLTAALISGGVNAAVFMAELGKN 142

Query: 415 GNTHARWNKICDRFGTYCDHXXXXXXXXXXXIVFLMALNVLSIIALHK 272
           GN+HA+WNKICDRFG++CDH           ++ ++ ++++SII L K
Sbjct: 143 GNSHAKWNKICDRFGSFCDHGGAAIIASFIGLLLMLVISIISIIKLLK 190


>ref|XP_002317067.1| predicted protein [Populus trichocarpa]
           gi|341958555|sp|B9I0U9.1|CSPLB_POPTR RecName:
           Full=CASP-like protein POPTRDRAFT_823125
           gi|222860132|gb|EEE97679.1| predicted protein [Populus
           trichocarpa]
          Length = 195

 Score =  160 bits (404), Expect = 4e-37
 Identities = 81/175 (46%), Positives = 109/175 (62%)
 Frame = -3

Query: 775 RSWIILVLRLLALCGTVSATLVMALNKEXXXXXXXXXXXTPIKASIQAKFQHTPAFVFFV 596
           + W++L++R++A   T +ATLVMALNKE           TPIK ++ AKFQHTPAFVFFV
Sbjct: 21  KKWVLLMVRVVAFLATAAATLVMALNKETKTLVVATVGNTPIKVTLTAKFQHTPAFVFFV 80

Query: 595 IANSVGSLHNLLMLAVDLFGYKYDFKGFRLLTTTLLDMGXXXXXXXXXXXXXXXSELGKN 416
           IAN + S HNLLM+ V+L G K D+KG RL    +LDM                +ELGKN
Sbjct: 81  IANGMASFHNLLMIMVELCGQKLDYKGMRLAMVAILDMMTVALVSGGASAATFMAELGKN 140

Query: 415 GNTHARWNKICDRFGTYCDHXXXXXXXXXXXIVFLMALNVLSIIALHKKSKYQSA 251
           GN+HARW+KICD+F T+CDH           ++ +M ++V+SI+ L  K K  S+
Sbjct: 141 GNSHARWDKICDKFETFCDHGGAALIASSAGLILMMIISVMSIMKLLIKPKSDSS 195


>ref|XP_002300491.1| predicted protein [Populus trichocarpa] gi|222847749|gb|EEE85296.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  155 bits (392), Expect = 1e-35
 Identities = 81/170 (47%), Positives = 105/170 (61%)
 Frame = -3

Query: 757 VLRLLALCGTVSATLVMALNKEXXXXXXXXXXXTPIKASIQAKFQHTPAFVFFVIANSVG 578
           +LR+LA   T +AT+VM LNKE           TPIKAS+ AKFQHTPAFVFFVIAN + 
Sbjct: 1   MLRVLAFFATAAATVVMGLNKETKTLVVATVGSTPIKASLTAKFQHTPAFVFFVIANGLA 60

Query: 577 SLHNLLMLAVDLFGYKYDFKGFRLLTTTLLDMGXXXXXXXXXXXXXXXSELGKNGNTHAR 398
           S+HNL+M+  DLFG K D+KG RL    +LD+                +ELGKNGN+HAR
Sbjct: 61  SIHNLVMIMGDLFGQKLDYKGLRLAMIAILDIMTVALVSGGVSAAAFMAELGKNGNSHAR 120

Query: 397 WNKICDRFGTYCDHXXXXXXXXXXXIVFLMALNVLSIIALHKKSKYQSAV 248
           WNKICD+F T+CDH           ++ ++ ++V+SII L  K K  S +
Sbjct: 121 WNKICDKFETFCDHGGGALIASFAGLILMLIISVMSIIKLLIKPKPDSTI 170


>gb|AAM64457.1| unknown [Arabidopsis thaliana]
          Length = 197

 Score =  154 bits (389), Expect = 2e-35
 Identities = 83/190 (43%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
 Frame = -3

Query: 811 AKPAEVVANKPARSW-IILVLRLLALCGTVSATLVMALNKEXXXXXXXXXXXTPIKASIQ 635
           A+   VVA    +SW ++L LR+ A   T++A +VM+LNKE            PIKA++ 
Sbjct: 2   AREKIVVAGGTTKSWKLLLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLT 61

Query: 634 AKFQHTPAFVFFVIANSVGSLHNLLMLAVDLFGYKYDFKGFRLLTTTLLDMGXXXXXXXX 455
           AKFQHTPAFVFFVIAN + S HNLLM+A+ +F  K ++KG RLL+  +LDM         
Sbjct: 62  AKFQHTPAFVFFVIANVMVSFHNLLMIALQIFSPKLEYKGLRLLSIAILDMLNATLVSAA 121

Query: 454 XXXXXXXSELGKNGNTHARWNKICDRFGTYCDHXXXXXXXXXXXIVFLMALNVLSIIALH 275
                  +ELGKNGN HA+WNK+CDRF TYCDH           ++ ++ ++ +SI  L 
Sbjct: 122 ANAAVFVAELGKNGNKHAKWNKVCDRFATYCDHGAGAIIAAFAGVILMLLVSAVSISRLL 181

Query: 274 KKSKYQSAVA 245
             SK  S  A
Sbjct: 182 INSKNFSTTA 191


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