BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005683
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531104.1| DNA repair and recombination protein radB, p...    77   1e-12
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ...    70   1e-10
ref|NP_001149161.1| LOC100282783 [Zea mays] gi|195625178|gb|ACG3...    69   4e-10
gb|ACR37601.1| unknown [Zea mays] gi|414887878|tpg|DAA63892.1| T...    67   1e-09
gb|ADE77590.1| unknown [Picea sitchensis]                              64   1e-08

>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
           communis] gi|223529300|gb|EEF31269.1| DNA repair and
           recombination protein radB, putative [Ricinus communis]
          Length = 315

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = -1

Query: 385 GSSKPALGESWKNVSHVRILLSHDQESNLCNVSILKHPCMASGRSAKFSILD 230
           G+ KPALGESWK++ HVR+LLS DQ  N+CNV+ILKHP  ASG++A+F++ D
Sbjct: 264 GNFKPALGESWKSIPHVRLLLSRDQGKNVCNVTILKHPSQASGKAARFTVDD 315


>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
           sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
           repair protein RAD51 homolog 4-like [Cucumis sativus]
          Length = 314

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/52 (63%), Positives = 40/52 (76%)
 Frame = -1

Query: 385 GSSKPALGESWKNVSHVRILLSHDQESNLCNVSILKHPCMASGRSAKFSILD 230
           G+SKPALGESWK+V HVR+ LS D  SN+C  SILKH  MASG +A+F I +
Sbjct: 263 GTSKPALGESWKSVPHVRLQLSRDAGSNVCQASILKHSSMASGMTARFVIYE 314


>ref|NP_001149161.1| LOC100282783 [Zea mays] gi|195625178|gb|ACG34419.1| DNA repair
           protein RAD51 [Zea mays]
          Length = 298

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = -1

Query: 385 GSSKPALGESWKNVSHVRILLSHDQESNLCNVSILKHPCMASGRSAKFSIL 233
           G+ KPALGESWK+V HVR+++S +  SN+C  ++LKH  +ASGR+AKF +L
Sbjct: 248 GAVKPALGESWKSVPHVRLMISREHSSNICTGTVLKHTLLASGRTAKFVLL 298


>gb|ACR37601.1| unknown [Zea mays] gi|414887878|tpg|DAA63892.1| TPA: DNA repair
           protein RAD51 [Zea mays]
          Length = 298

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/48 (58%), Positives = 39/48 (81%)
 Frame = -1

Query: 385 GSSKPALGESWKNVSHVRILLSHDQESNLCNVSILKHPCMASGRSAKF 242
           G+ KPALGESWK+V HVR+++S +  SN+C  ++LKH  +ASGR+AKF
Sbjct: 248 GAVKPALGESWKSVPHVRLMISREHSSNICTGTVLKHTLLASGRTAKF 295


>gb|ADE77590.1| unknown [Picea sitchensis]
          Length = 320

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/50 (56%), Positives = 38/50 (76%)
 Frame = -1

Query: 385 GSSKPALGESWKNVSHVRILLSHDQESNLCNVSILKHPCMASGRSAKFSI 236
           G+SKPALGESWK++ HVR+LLS D  SN+C++S+LKH  M   + A  S+
Sbjct: 269 GTSKPALGESWKSMPHVRLLLSRDPVSNICDMSLLKHTSMVCDQQASLSL 318