BLASTX nr result

ID: Coptis24_contig00005666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005666
         (2082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625280.1| hypothetical protein MTR_7g093450 [Medicago ...   627   e-177
ref|XP_002323329.1| predicted protein [Populus trichocarpa] gi|2...   608   e-171
ref|XP_002280022.1| PREDICTED: uncharacterized protein LOC100255...   602   e-169
ref|XP_002308359.1| predicted protein [Populus trichocarpa] gi|2...   597   e-168
ref|XP_003535115.1| PREDICTED: uncharacterized protein LOC100782...   590   e-166

>ref|XP_003625280.1| hypothetical protein MTR_7g093450 [Medicago truncatula]
            gi|355500295|gb|AES81498.1| hypothetical protein
            MTR_7g093450 [Medicago truncatula]
          Length = 601

 Score =  627 bits (1617), Expect = e-177
 Identities = 325/591 (54%), Positives = 377/591 (63%), Gaps = 44/591 (7%)
 Frame = +2

Query: 119  MTDLAKQIHAGGGSFLS-----DFKNLFSVFKTRRTMV-AYGFLFTVIACTVFIAFSPSS 280
            M D  K +  GGG+        DFKN+F++ KT+ T+   Y F+   IA T+F+AFSPS 
Sbjct: 1    MADTTKYVPIGGGTTNGNLHKLDFKNIFTILKTKTTLAFVYAFMLVFIAFTLFLAFSPSP 60

Query: 281  NSSAPWFNNIXXXXXXXXXXXXXXXXXXXXXXXXXXXVPMLD---NNPNITRSLNTTSE- 448
              S    ++                            V   D   NN +ITRS N TS+ 
Sbjct: 61   TISTTTPSSSTSQFSSIFSYFFPNTTTFSQLNNTTDLVHPFDPFQNNTSITRSTNVTSQS 120

Query: 449  --------------------------LQKQAPPSNHTD--------VKQQPVLNQTXXXX 526
                                      +Q   P  N+T         VK+QP L       
Sbjct: 121  HNPNTSEKTINSNITTVQNSSHDAVPVQSPIPSKNNTSITKPTSQIVKKQPSLVTNHTSN 180

Query: 527  XXXXXXXXXXXXXMNKTVTEQSRVDNYXXXXXXXXXXXXXXXXXXXXXXXXKDEKLKNNK 706
                          N TV     V N                         K     N  
Sbjct: 181  SDETKVMKNSNQTTNATVEGVPIVPN--KNLSSDSSLKGVDLHNYTASLARKQNNGSNKY 238

Query: 707  VGNFSSLMHCDIFDGNWVKDDSYPLYSPGSCPLIDEQFNCFINGRPDRDFQKYRWQPKDC 886
                 SLM CD FDG W+KDDSYPLY PGSC +IDEQFNC  NGRPD+D+QKY+W+PK C
Sbjct: 239  AELMESLMKCDFFDGEWIKDDSYPLYKPGSCSIIDEQFNCIRNGRPDKDYQKYKWKPKGC 298

Query: 887  NIPRLNGKDMLELLRGKRLAFVGDSLNRNMWESLICILRNSVSDKSKVFEGSGRREFRTE 1066
            ++PRL+G  ML+LLRGKRL FVGDSLNRNMWESLICIL+NSV DK KV+E +GR  FR E
Sbjct: 299  SLPRLDGHRMLDLLRGKRLVFVGDSLNRNMWESLICILKNSVKDKKKVYEANGRVHFRGE 358

Query: 1067 HSYLFVFKDYNCTVEFFRSPFLVQEWELPETDGSKKETLRLDLVESSSSKYKDADYIVFN 1246
             SY FVFKDY  +VE F SPFLVQEWE+P+ +G+KKETLRLDLV  SS +YKDAD IVFN
Sbjct: 359  ASYSFVFKDYKFSVELFVSPFLVQEWEMPDKNGTKKETLRLDLVGRSSDQYKDADIIVFN 418

Query: 1247 TGHWWTHEKTSKGKDYYQEGSHVYEDLNVVEAFRKALTTWARWVDANINPTKSLVLFRGY 1426
            TGHWWTH+KTSKGKDYYQEGSHVY++LNV+EAFR+A+TTW RWVDAN+NPTKS+VLFRGY
Sbjct: 419  TGHWWTHDKTSKGKDYYQEGSHVYDELNVLEAFRRAITTWGRWVDANVNPTKSIVLFRGY 478

Query: 1427 SASHFRGGQWNSGGQCNDETEPIKNNTYLSKYPPKMRVLEKVLKNMKTPVAYLNITRMTD 1606
            SASHF GGQWNSGGQC+ ET PI N  YL++YPPKMRVLEKVLKNMK PV+YLNITRMTD
Sbjct: 479  SASHFSGGQWNSGGQCDHETAPIDNEKYLTEYPPKMRVLEKVLKNMKNPVSYLNITRMTD 538

Query: 1607 FRKDAHPSVYRKQNLSAEERKSPLRFQDCSHWCLPGVPDSWNELLYARLLI 1759
            FRKD HPS+YRKQNLS EERKSPLRFQDCSHWCLPGVPD+WNE+LYA LL+
Sbjct: 539  FRKDGHPSIYRKQNLSPEERKSPLRFQDCSHWCLPGVPDAWNEILYAELLM 589


>ref|XP_002323329.1| predicted protein [Populus trichocarpa] gi|222867959|gb|EEF05090.1|
            predicted protein [Populus trichocarpa]
          Length = 571

 Score =  608 bits (1568), Expect = e-171
 Identities = 278/345 (80%), Positives = 308/345 (89%)
 Frame = +2

Query: 725  LMHCDIFDGNWVKDDSYPLYSPGSCPLIDEQFNCFINGRPDRDFQKYRWQPKDCNIPRLN 904
            L++CD FDG WVKDDSYPLY PGSC LIDEQFNC +NGRPD+D+QKY+W+PK C +PRLN
Sbjct: 215  LVNCDFFDGKWVKDDSYPLYKPGSCSLIDEQFNCILNGRPDKDYQKYKWKPKGCTLPRLN 274

Query: 905  GKDMLELLRGKRLAFVGDSLNRNMWESLICILRNSVSDKSKVFEGSGRREFRTEHSYLFV 1084
               ML++LRGKRL FVGDSLNRNMWESL+CIL++SV D+SKVFE +GR  FR E SY F+
Sbjct: 275  PGHMLDMLRGKRLVFVGDSLNRNMWESLVCILKSSVKDQSKVFEVNGRVHFRGEASYSFL 334

Query: 1085 FKDYNCTVEFFRSPFLVQEWELPETDGSKKETLRLDLVESSSSKYKDADYIVFNTGHWWT 1264
            FKDYNCTVEFF SPFLVQEWELPE DGSKKETLRLDLV  SSS+YK AD IVFNTGHWWT
Sbjct: 335  FKDYNCTVEFFVSPFLVQEWELPEKDGSKKETLRLDLVGRSSSQYKGADVIVFNTGHWWT 394

Query: 1265 HEKTSKGKDYYQEGSHVYEDLNVVEAFRKALTTWARWVDANINPTKSLVLFRGYSASHFR 1444
            H+KTSKGKDYYQEGSHVY++LNV+EAFRKALTTWARWVDAN+NP KSLVLFRGYSASHF 
Sbjct: 395  HDKTSKGKDYYQEGSHVYDELNVLEAFRKALTTWARWVDANVNPMKSLVLFRGYSASHFS 454

Query: 1445 GGQWNSGGQCNDETEPIKNNTYLSKYPPKMRVLEKVLKNMKTPVAYLNITRMTDFRKDAH 1624
            GGQWNSGGQC+ E EPIKN TYL +YPPKM VLEKVL+NMKT V YLN+T+MTDFRKD H
Sbjct: 455  GGQWNSGGQCDSEVEPIKNVTYLREYPPKMLVLEKVLRNMKTHVRYLNVTQMTDFRKDGH 514

Query: 1625 PSVYRKQNLSAEERKSPLRFQDCSHWCLPGVPDSWNELLYARLLI 1759
            PSVYRKQNLS EERKSPL FQDCSHWCLPGVPD+WNE+LYA LL+
Sbjct: 515  PSVYRKQNLSPEERKSPLLFQDCSHWCLPGVPDAWNEILYAELLV 559



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = +2

Query: 176 KNLFSVFKTRRTMV-AYGFLFTVIACTVFIAFSPSSNSSAPWFNNI 310
           KNL S+ KTR T+  AYGF+   +A T+F+AFSPS NSS+PWF NI
Sbjct: 2   KNLSSLLKTRTTVTFAYGFMLAFVAFTIFLAFSPSPNSSSPWFTNI 47


>ref|XP_002280022.1| PREDICTED: uncharacterized protein LOC100255639 [Vitis vinifera]
          Length = 659

 Score =  602 bits (1552), Expect = e-169
 Identities = 267/346 (77%), Positives = 309/346 (89%)
 Frame = +2

Query: 722  SLMHCDIFDGNWVKDDSYPLYSPGSCPLIDEQFNCFINGRPDRDFQKYRWQPKDCNIPRL 901
            SLM+C++F+G WVKDDSYPLY PGSC LIDEQFNCF+NGRPD+D+ K +W+PK C++PRL
Sbjct: 294  SLMNCNLFEGQWVKDDSYPLYKPGSCSLIDEQFNCFLNGRPDKDYMKLKWKPKGCDLPRL 353

Query: 902  NGKDMLELLRGKRLAFVGDSLNRNMWESLICILRNSVSDKSKVFEGSGRREFRTEHSYLF 1081
            NG  MLELLRGKRL FVGDSLNRNMWESL+CILRNSV D++KV+E SGR  FRTE SY F
Sbjct: 354  NGSHMLELLRGKRLVFVGDSLNRNMWESLVCILRNSVKDRTKVYEASGRHHFRTEASYSF 413

Query: 1082 VFKDYNCTVEFFRSPFLVQEWELPETDGSKKETLRLDLVESSSSKYKDADYIVFNTGHWW 1261
            +F++Y+C+VEFF SPFLVQEWE+P+ +GSKKETLRLD + +SS KYK AD I+FNTGHWW
Sbjct: 414  IFEEYHCSVEFFVSPFLVQEWEMPDKNGSKKETLRLDKIPTSSDKYKTADIIIFNTGHWW 473

Query: 1262 THEKTSKGKDYYQEGSHVYEDLNVVEAFRKALTTWARWVDANINPTKSLVLFRGYSASHF 1441
            TH+KTSKGKDYYQEGSHVY +LNV+EAFRKALTTWARWVDAN+NP KSLV FRGYS+SHF
Sbjct: 474  THDKTSKGKDYYQEGSHVYGELNVMEAFRKALTTWARWVDANVNPAKSLVFFRGYSSSHF 533

Query: 1442 RGGQWNSGGQCNDETEPIKNNTYLSKYPPKMRVLEKVLKNMKTPVAYLNITRMTDFRKDA 1621
             GGQWNSGGQC+ ETEPI+N TY+  YPPKM VLEK+L+ MKT V YLNITR+TD+RKD 
Sbjct: 534  SGGQWNSGGQCDGETEPIRNETYIPDYPPKMIVLEKILRGMKTQVTYLNITRITDYRKDG 593

Query: 1622 HPSVYRKQNLSAEERKSPLRFQDCSHWCLPGVPDSWNELLYARLLI 1759
            HPS+YRKQNLS EER+SPLRFQDCSHWCLPGVPD+WNELLYA +LI
Sbjct: 594  HPSIYRKQNLSDEERRSPLRFQDCSHWCLPGVPDAWNELLYAEILI 639



 Score = 71.6 bits (174), Expect = 8e-10
 Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = +2

Query: 119 MTDLAKQIHAGGGSFLSDFKNLFSVFKTRRTM-VAYGFLFTVIACTVFIAFSPSSNSSAP 295
           M D  K +  GGG+  SDF +LFS+ +TRRTM   YGF+F  I  TVF+AFSP +N+S+P
Sbjct: 1   MADGTKHLPLGGGALFSDFTSLFSMARTRRTMFFVYGFMFAFIVFTVFLAFSP-ANASSP 59

Query: 296 WFNNI 310
           WF NI
Sbjct: 60  WFTNI 64


>ref|XP_002308359.1| predicted protein [Populus trichocarpa] gi|222854335|gb|EEE91882.1|
            predicted protein [Populus trichocarpa]
          Length = 590

 Score =  597 bits (1538), Expect = e-168
 Identities = 272/354 (76%), Positives = 307/354 (86%)
 Frame = +2

Query: 698  NNKVGNFSSLMHCDIFDGNWVKDDSYPLYSPGSCPLIDEQFNCFINGRPDRDFQKYRWQP 877
            +N+V N   L +CD FDG WVKDDSYPLY PGSC LIDEQFNC INGRPD+D+QKY+W+P
Sbjct: 227  DNRVQN---LANCDFFDGEWVKDDSYPLYKPGSCSLIDEQFNCIINGRPDKDYQKYKWKP 283

Query: 878  KDCNIPRLNGKDMLELLRGKRLAFVGDSLNRNMWESLICILRNSVSDKSKVFEGSGRREF 1057
            K C +PRLN + ML++LRGKRL FVGDSLNRNMWESL+CIL+ SV D+SKVFE +GR  F
Sbjct: 284  KGCTLPRLNPRHMLDMLRGKRLVFVGDSLNRNMWESLVCILKGSVKDQSKVFEVNGRHHF 343

Query: 1058 RTEHSYLFVFKDYNCTVEFFRSPFLVQEWELPETDGSKKETLRLDLVESSSSKYKDADYI 1237
            R E SY F+FKDYNCT++FF SPFLVQEWE+ E DGS KETLRLDLV  SSS+YK AD I
Sbjct: 344  RGEASYSFLFKDYNCTIDFFVSPFLVQEWEMHEKDGSMKETLRLDLVGRSSSQYKSADII 403

Query: 1238 VFNTGHWWTHEKTSKGKDYYQEGSHVYEDLNVVEAFRKALTTWARWVDANINPTKSLVLF 1417
            VFNTGHWWTH+KTSKGKDYYQEG+HVY +LNV+EAFRKALTTWARWVDAN++P KSLV F
Sbjct: 404  VFNTGHWWTHDKTSKGKDYYQEGNHVYNELNVLEAFRKALTTWARWVDANVDPMKSLVFF 463

Query: 1418 RGYSASHFRGGQWNSGGQCNDETEPIKNNTYLSKYPPKMRVLEKVLKNMKTPVAYLNITR 1597
            RGYSASHF GGQWNSGGQC+ E EPIKN TYL +YPPKM VLEKVL+NMK  V YLN+T+
Sbjct: 464  RGYSASHFSGGQWNSGGQCDSEAEPIKNVTYLRQYPPKMLVLEKVLRNMKAHVTYLNVTQ 523

Query: 1598 MTDFRKDAHPSVYRKQNLSAEERKSPLRFQDCSHWCLPGVPDSWNELLYARLLI 1759
            MTD+RKD HPSVYRKQNLS EERKSPL FQDCSHWCLPGVPD+WNE+LYA LL+
Sbjct: 524  MTDYRKDGHPSVYRKQNLSPEERKSPLHFQDCSHWCLPGVPDAWNEILYANLLV 577



 Score = 64.7 bits (156), Expect = 9e-08
 Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = +2

Query: 176 KNLFSVFKTRRTMV-AYGFLFTVIACTVFIAFSPSSNSSAPWFNNI 310
           KNL S+ KTRRT+  AYGF+F  +A T+F+AFSPS NSS+PWF NI
Sbjct: 2   KNLSSLLKTRRTVTFAYGFMFAFVAFTIFLAFSPSPNSSSPWFTNI 47


>ref|XP_003535115.1| PREDICTED: uncharacterized protein LOC100782012 [Glycine max]
          Length = 588

 Score =  590 bits (1522), Expect = e-166
 Identities = 265/346 (76%), Positives = 306/346 (88%)
 Frame = +2

Query: 722  SLMHCDIFDGNWVKDDSYPLYSPGSCPLIDEQFNCFINGRPDRDFQKYRWQPKDCNIPRL 901
            SL+ CD FDG WVKDDSYPLY PGSC ++DEQF+C  NGRPD+DFQKY+W+PK CN+PRL
Sbjct: 231  SLIKCDFFDGEWVKDDSYPLYEPGSCNIVDEQFHCIQNGRPDKDFQKYKWKPKGCNLPRL 290

Query: 902  NGKDMLELLRGKRLAFVGDSLNRNMWESLICILRNSVSDKSKVFEGSGRREFRTEHSYLF 1081
            +G  ML++LRGKRL FVGDS+NRNMWESLICILRN+V DKSKV+E +GR  FR E SY F
Sbjct: 291  DGHIMLDMLRGKRLIFVGDSINRNMWESLICILRNAVKDKSKVYEANGRVHFRGEASYSF 350

Query: 1082 VFKDYNCTVEFFRSPFLVQEWELPETDGSKKETLRLDLVESSSSKYKDADYIVFNTGHWW 1261
            VFKDYN +VE F SPFLVQEWE+   +G+KKETLRLDLV  SS +YK+AD I+FNTGHWW
Sbjct: 351  VFKDYNFSVELFVSPFLVQEWEVQIKNGTKKETLRLDLVGKSSVQYKNADIIIFNTGHWW 410

Query: 1262 THEKTSKGKDYYQEGSHVYEDLNVVEAFRKALTTWARWVDANINPTKSLVLFRGYSASHF 1441
            TH+KTSKGKDYYQEGSHVY++LNV+EAFR+A+TTW+RW+DANINP+KS+V FRGYSASHF
Sbjct: 411  THDKTSKGKDYYQEGSHVYDELNVLEAFRRAITTWSRWIDANINPSKSMVFFRGYSASHF 470

Query: 1442 RGGQWNSGGQCNDETEPIKNNTYLSKYPPKMRVLEKVLKNMKTPVAYLNITRMTDFRKDA 1621
             GGQWNSGGQC+ ET PIKN  YL +YPPKMRVLEKVLKNMKT V YLN+T+MTDFRKD 
Sbjct: 471  SGGQWNSGGQCDSETVPIKNEKYLREYPPKMRVLEKVLKNMKTHVTYLNVTKMTDFRKDG 530

Query: 1622 HPSVYRKQNLSAEERKSPLRFQDCSHWCLPGVPDSWNELLYARLLI 1759
            HPS+YRKQNLS EERKSPLR+QDCSHWCLPGVPD+WNE+LYA LL+
Sbjct: 531  HPSIYRKQNLSPEERKSPLRYQDCSHWCLPGVPDAWNEILYAELLL 576