BLASTX nr result

ID: Coptis24_contig00005653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005653
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA54871.1| putative chorismate mutase [Fagus sylvatica]           437   e-120
ref|XP_002284119.1| PREDICTED: chorismate mutase, chloroplastic ...   417   e-114
gb|ACI41889.1| chorismate mutase 1 [Petunia x hybrida]                414   e-113
ref|XP_002532905.1| Chorismate mutase, chloroplast precursor, pu...   413   e-113
ref|XP_002324083.1| chorismate mutase [Populus trichocarpa] gi|2...   412   e-112

>gb|ABA54871.1| putative chorismate mutase [Fagus sylvatica]
          Length = 323

 Score =  437 bits (1123), Expect = e-120
 Identities = 219/304 (72%), Positives = 252/304 (82%), Gaps = 2/304 (0%)
 Frame = -1

Query: 1202 KFSLPKSLYSFPTKKNLNLMKLTPMSSARISFQPLHASATSITSVEKKKRVDESESLTLD 1023
            +FS P S +   T+ N +  +    S A+  FQ + A+ATSI S+  KKRVD SE+LTLD
Sbjct: 21   RFSRPISRFVLQTRLNFSF-RFQGSSLAKRGFQSVQAAATSIGSLSIKKRVDVSENLTLD 79

Query: 1022 SIRNALIRQEDSIIYGLLERSQYCYNADAYDHNAFAMDGFHGSLVEFMVRETEKLHAKVG 843
             IR +LIRQEDSII+ LLER+QYCYNAD Y+ NAF+MDGFHGSLVE+MV+ETEKLHA+VG
Sbjct: 80   GIRISLIRQEDSIIFSLLERAQYCYNADTYNPNAFSMDGFHGSLVEYMVKETEKLHAQVG 139

Query: 842  RYKSPDEHPFFPADLPEPMLPPLQYPQVLHPIAVSININKKVWDMYFSNLLPRLVKEGND 663
            RYKSPDEHPFFP DLP+P+LPPLQYPQVLHP A SININKKVWDMYF +L+PRLV+EG+D
Sbjct: 140  RYKSPDEHPFFPDDLPDPLLPPLQYPQVLHPFADSININKKVWDMYFRDLIPRLVEEGDD 199

Query: 662  GNCGSTALCDTTCLQALSKRIHYGKFVAEAKFRASPAVYEDAIRAQDSDQLMRLLTYEAV 483
            GNCGSTA+CDT CLQALSKR+HYGKFVAEAKFRASP  YE AIRAQD  +LM +LTY  V
Sbjct: 200  GNCGSTAVCDTMCLQALSKRMHYGKFVAEAKFRASPDAYEAAIRAQDRKKLMDMLTYSEV 259

Query: 482  EEVVKQRVEMKTKTYGQEVV--CENDGADPVCKITPSLVADLYGEWIMPLTKEVQVEYLL 309
            EE +++RVEMK KTY QEV    E D A+PV KI PSLVADLYG+WIMPLTKEVQVEYLL
Sbjct: 260  EEAIRKRVEMKAKTYAQEVTVNVEEDEAEPVYKIEPSLVADLYGDWIMPLTKEVQVEYLL 319

Query: 308  RRLD 297
            RRLD
Sbjct: 320  RRLD 323


>ref|XP_002284119.1| PREDICTED: chorismate mutase, chloroplastic [Vitis vinifera]
            gi|296082967|emb|CBI22268.3| unnamed protein product
            [Vitis vinifera] gi|323695615|gb|ACY29655.2| chorismate
            mutase 02 [Vitis vinifera]
          Length = 320

 Score =  417 bits (1071), Expect = e-114
 Identities = 215/305 (70%), Positives = 247/305 (80%), Gaps = 3/305 (0%)
 Frame = -1

Query: 1202 KFSLPKSLYSFPTKKNLNLMKLTPMSSARISFQPLHASATSITSVEKKKRVDESESLTLD 1023
            K S P S   F +K N       P    R+  Q +H S T +   E+KKRVDES++LTLD
Sbjct: 20   KISKPSSY--FTSKTNHCSSCRFPSLKNRV-IQSIHVSPTPLR-FERKKRVDESQNLTLD 75

Query: 1022 SIRNALIRQEDSIIYGLLERSQYCYNADAYDHNAFAMDGFHGSLVEFMVRETEKLHAKVG 843
            +IRN+LIRQEDSII+ LLER+QYCYNA+ YD +A +MDGFHGSLVEFMVRETEKLHA+VG
Sbjct: 76   AIRNSLIRQEDSIIFSLLERAQYCYNAETYDPDALSMDGFHGSLVEFMVRETEKLHAQVG 135

Query: 842  RYKSPDEHPFFPADLPEPMLPPLQYPQVLHPIAVSININKKVWDMYFSNLLPRLVKEGND 663
            RYKSPDEHPFFP +LPEPMLPPLQYP+VLHP +  ININ+++W MYF +LLPRLVKEG+D
Sbjct: 136  RYKSPDEHPFFPVELPEPMLPPLQYPKVLHPGSDLININEQIWSMYFRDLLPRLVKEGDD 195

Query: 662  GNCGSTALCDTTCLQALSKRIHYGKFVAEAKFRASPAVYEDAIRAQDSDQLMRLLTYEAV 483
            GN GS A+CDT CLQALSKRIHYGKFVAEAKF+ASP  YE AI+AQDS +LM +LTY+ V
Sbjct: 196  GNYGSAAVCDTICLQALSKRIHYGKFVAEAKFQASPDAYEAAIKAQDSQRLMDMLTYQRV 255

Query: 482  EEVVKQRVEMKTKTYGQEVV---CENDGADPVCKITPSLVADLYGEWIMPLTKEVQVEYL 312
            E+VVK RVEMKTK YGQEVV    E+D A PV KI PSLVADLYG+WIMPLTKEVQV YL
Sbjct: 256  EDVVKMRVEMKTKAYGQEVVVNGMEDDDAGPVYKIKPSLVADLYGDWIMPLTKEVQVAYL 315

Query: 311  LRRLD 297
            LRRLD
Sbjct: 316  LRRLD 320


>gb|ACI41889.1| chorismate mutase 1 [Petunia x hybrida]
          Length = 324

 Score =  414 bits (1065), Expect = e-113
 Identities = 209/296 (70%), Positives = 245/296 (82%), Gaps = 5/296 (1%)
 Frame = -1

Query: 1169 PTKKNLNLMK---LTPMSSARISFQPLHASATSITSVEKKKRVDESESLTLDSIRNALIR 999
            P KK  + +K   +   SS +   +PL ASATS+  +  K RVDE+ES TLD IR++LIR
Sbjct: 30   PHKKWSHFVKFQLVNSSSSIKHGIRPLQASATSL-GLGNKNRVDETESYTLDGIRHSLIR 88

Query: 998  QEDSIIYGLLERSQYCYNADAYDHNAFAMDGFHGSLVEFMVRETEKLHAKVGRYKSPDEH 819
            QEDSII+ L+ER+QYCYNA+ YD + FAMDGFHGSLVE++VRETEKLHA VGRYKSPDEH
Sbjct: 89   QEDSIIFSLVERAQYCYNAETYDPDVFAMDGFHGSLVEYIVRETEKLHATVGRYKSPDEH 148

Query: 818  PFFPADLPEPMLPPLQYPQVLHPIAVSININKKVWDMYFSNLLPRLVKEGNDGNCGSTAL 639
            PFFP  LPEP+LPP+QYP+VLHPIA SININ K+W+MYF NLLPRLVKEG+DGN GSTA+
Sbjct: 149  PFFPKVLPEPVLPPMQYPKVLHPIADSININVKIWEMYFENLLPRLVKEGDDGNYGSTAV 208

Query: 638  CDTTCLQALSKRIHYGKFVAEAKFRASPAVYEDAIRAQDSDQLMRLLTYEAVEEVVKQRV 459
            CDT C+QALSKRIHYGKFVAEAK+RASP VY  AIRAQD + LM LLTY AVEE +K+RV
Sbjct: 209  CDTICVQALSKRIHYGKFVAEAKYRASPEVYNAAIRAQDRNGLMDLLTYPAVEEAIKRRV 268

Query: 458  EMKTKTYGQEVVCE--NDGADPVCKITPSLVADLYGEWIMPLTKEVQVEYLLRRLD 297
            E+KT+TYGQE+      +G DPV KI PSLVA+LYG+WIMPLTKEVQV+YLLRRLD
Sbjct: 269  EIKTRTYGQELHINGPENGGDPVYKIKPSLVAELYGDWIMPLTKEVQVQYLLRRLD 324


>ref|XP_002532905.1| Chorismate mutase, chloroplast precursor, putative [Ricinus communis]
            gi|223527339|gb|EEF29485.1| Chorismate mutase,
            chloroplast precursor, putative [Ricinus communis]
          Length = 321

 Score =  413 bits (1061), Expect = e-113
 Identities = 208/271 (76%), Positives = 234/271 (86%), Gaps = 3/271 (1%)
 Frame = -1

Query: 1100 LHASATSITSVEKKKRVDESESLTLDSIRNALIRQEDSIIYGLLERSQYCYNADAYDHNA 921
            + ASA+SI  + KKKRVDESE+LTL++IR +LIRQEDSII+ LLERSQYCYNAD YD +A
Sbjct: 52   VQASASSI-GLTKKKRVDESENLTLENIRRSLIRQEDSIIFSLLERSQYCYNADTYDPDA 110

Query: 920  FAMDGFHGSLVEFMVRETEKLHAKVGRYKSPDEHPFFPADLPEPMLPPLQYPQVLHPIAV 741
            FAMDGFHGSLVEFM+RETEKLHA+VGRYKSPDE PFFP DLPEP+LPPLQYPQVLHP+A 
Sbjct: 111  FAMDGFHGSLVEFMLRETEKLHAQVGRYKSPDELPFFPDDLPEPLLPPLQYPQVLHPLAD 170

Query: 740  SININKKVWDMYFSNLLPRLVKEGNDGNCGSTALCDTTCLQALSKRIHYGKFVAEAKFRA 561
            SININ KVWDMYF +LLPRLVK+G+DGN GSTA+CD  CLQ LSKRIHYGKFVAEAKFR 
Sbjct: 171  SININNKVWDMYFRDLLPRLVKDGSDGNSGSTAVCDAICLQVLSKRIHYGKFVAEAKFRN 230

Query: 560  SPAVYEDAIRAQDSDQLMRLLTYEAVEEVVKQRVEMKTKTYGQEV--VCENDG-ADPVCK 390
            SP  YE AIRAQD  +LM LLTY  VEE +K+RVE+KTKT+GQEV  +CE D   +P  K
Sbjct: 231  SPDAYEAAIRAQDRYRLMELLTYTKVEEAIKKRVEIKTKTFGQEVTAICEEDEITEPAYK 290

Query: 389  ITPSLVADLYGEWIMPLTKEVQVEYLLRRLD 297
            I  +LVADLYG+WIMPLTKEVQVEYLLRRLD
Sbjct: 291  IDTTLVADLYGDWIMPLTKEVQVEYLLRRLD 321


>ref|XP_002324083.1| chorismate mutase [Populus trichocarpa] gi|222867085|gb|EEF04216.1|
            chorismate mutase [Populus trichocarpa]
          Length = 374

 Score =  412 bits (1059), Expect = e-112
 Identities = 208/301 (69%), Positives = 242/301 (80%), Gaps = 2/301 (0%)
 Frame = -1

Query: 1202 KFSLPKSLYSFPTKKNLNLMKLTPMSSARISFQPLHASATSITSVEKKKRVDESESLTLD 1023
            +FS         T +N   ++++  +  +     + ASA S+   EKK RVD SE+LTLD
Sbjct: 20   RFSRANYSLGLQTGQNGTTLRVSCPNLTKRRILSVQASAVSMGLTEKK-RVDISENLTLD 78

Query: 1022 SIRNALIRQEDSIIYGLLERSQYCYNADAYDHNAFAMDGFHGSLVEFMVRETEKLHAKVG 843
            +IR++LI QEDSII+ LLERSQYCYNA  YD  AFA++GFHGSL+EF+++ETEKLHA++G
Sbjct: 79   NIRSSLILQEDSIIFSLLERSQYCYNASTYDPEAFALEGFHGSLIEFILKETEKLHAQLG 138

Query: 842  RYKSPDEHPFFPADLPEPMLPPLQYPQVLHPIAVSININKKVWDMYFSNLLPRLVKEGND 663
            RYKSPDEHPFFP DLPEP+LPPLQYPQVLHPI  SININK VWDMYF  L+PRLVKEG+D
Sbjct: 139  RYKSPDEHPFFPDDLPEPVLPPLQYPQVLHPITDSININKTVWDMYFRELIPRLVKEGDD 198

Query: 662  GNCGSTALCDTTCLQALSKRIHYGKFVAEAKFRASPAVYEDAIRAQDSDQLMRLLTYEAV 483
            GNCGSTA+CDT CLQALSKRIHYG+FVAEAKFRASP  YE AIRAQDS +LM +LTY AV
Sbjct: 199  GNCGSTAVCDTICLQALSKRIHYGEFVAEAKFRASPDDYEAAIRAQDSKRLMEILTYPAV 258

Query: 482  EEVVKQRVEMKTKTYGQEVVCEN--DGADPVCKITPSLVADLYGEWIMPLTKEVQVEYLL 309
            EE VK+RVEMK K +GQEV  E   DG DPV KI P+LVADLYGEWIMPLTKEVQV+YLL
Sbjct: 259  EEAVKKRVEMKAKAFGQEVTMEGEIDGTDPVYKIRPTLVADLYGEWIMPLTKEVQVQYLL 318

Query: 308  R 306
            R
Sbjct: 319  R 319


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