BLASTX nr result

ID: Coptis24_contig00005603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005603
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264182.1| PREDICTED: protein transport protein SFT2 [V...   306   4e-81
ref|XP_002524595.1| Protein transport protein SFT2, putative [Ri...   304   2e-80
ref|XP_002273570.1| PREDICTED: protein transport protein SFT2 [V...   299   6e-79
ref|XP_002320536.1| predicted protein [Populus trichocarpa] gi|2...   298   2e-78
ref|XP_004139775.1| PREDICTED: protein transport protein SFT2-li...   290   4e-76

>ref|XP_002264182.1| PREDICTED: protein transport protein SFT2 [Vitis vinifera]
           gi|296085064|emb|CBI28479.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  306 bits (785), Expect = 4e-81
 Identities = 160/231 (69%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
 Frame = -3

Query: 957 MQKTAQSWFMGGPSTNNDQKAS--SLLADWNXXXXXXXXXXXXXXXXSNLGFDLEAAVRT 784
           MQKTAQ+WFMGGPS+++ ++ S  SLLADWN                  LGFDLEAAVRT
Sbjct: 1   MQKTAQAWFMGGPSSSSGREKSPASLLADWNAYAASQEPDSSA------LGFDLEAAVRT 54

Query: 783 ANDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLVCGIFFVFIAFTMFLPV 604
           AND VSG+F VVSKGVRD+PGS QSA +NVPSGKSLMYF +LL  GIFFVFIAF MFLPV
Sbjct: 55  ANDKVSGSFNVVSKGVRDIPGSFQSAATNVPSGKSLMYFSLLLAAGIFFVFIAFAMFLPV 114

Query: 603 MVLMPQKFALCFTFGCAFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIYVSM 424
           MVLMPQKFA+CFT GC FIIGSFFALKGPKNQL+HM S+ERLPFTLGF  SMVGTIYVSM
Sbjct: 115 MVLMPQKFAICFTIGCVFIIGSFFALKGPKNQLAHMFSRERLPFTLGFISSMVGTIYVSM 174

Query: 423 XXXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 271
                              SYYAISYFPGGS+G+KFLSSTLTS IL+CFGR
Sbjct: 175 VLHSYVFSVLFSVLQVLALSYYAISYFPGGSAGMKFLSSTLTSLILKCFGR 225


>ref|XP_002524595.1| Protein transport protein SFT2, putative [Ricinus communis]
           gi|223536148|gb|EEF37803.1| Protein transport protein
           SFT2, putative [Ricinus communis]
          Length = 225

 Score =  304 bits (779), Expect = 2e-80
 Identities = 156/231 (67%), Positives = 176/231 (76%), Gaps = 2/231 (0%)
 Frame = -3

Query: 957 MQKTAQSWFMGGPSTNN--DQKASSLLADWNXXXXXXXXXXXXXXXXSNLGFDLEAAVRT 784
           MQKTAQSWF GGPS+    + +  SLLA+WN                 +LGFDLEAAVRT
Sbjct: 1   MQKTAQSWFTGGPSSTTPYNDEPKSLLANWNAYAASQDSDSS------SLGFDLEAAVRT 54

Query: 783 ANDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLVCGIFFVFIAFTMFLPV 604
            +D  +GTF VVSKGVRDLPG+ QSAT+NVPSGKSLMYFG+LL  G+FF+FIAFTMFLPV
Sbjct: 55  TSDKFTGTFNVVSKGVRDLPGNFQSATTNVPSGKSLMYFGVLLAAGVFFIFIAFTMFLPV 114

Query: 603 MVLMPQKFALCFTFGCAFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIYVSM 424
           MVL+PQKFA+CFT GCAFIIGSFFALKGP+NQL+HM SKERLPFTLGF G+MVGT+YVSM
Sbjct: 115 MVLVPQKFAICFTVGCAFIIGSFFALKGPRNQLAHMSSKERLPFTLGFIGTMVGTVYVSM 174

Query: 423 XXXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 271
                              SYYAISYFPGGS+GLKFLSST TSS+LRCFGR
Sbjct: 175 VLHSYVLSVLFSVLQVLALSYYAISYFPGGSTGLKFLSSTFTSSLLRCFGR 225


>ref|XP_002273570.1| PREDICTED: protein transport protein SFT2 [Vitis vinifera]
           gi|296089976|emb|CBI39795.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  299 bits (766), Expect = 6e-79
 Identities = 159/230 (69%), Positives = 174/230 (75%), Gaps = 6/230 (2%)
 Frame = -3

Query: 942 QSWFMGGPSTNND-QKASS-----LLADWNXXXXXXXXXXXXXXXXSNLGFDLEAAVRTA 781
           QSWF   PS + D QKASS     LLA WN                  +GFDLE+AVR+A
Sbjct: 5   QSWF--SPSGSEDLQKASSSSSSSLLAQWNSYAAESRSSEEEGSLGMGMGFDLESAVRSA 62

Query: 780 NDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLVCGIFFVFIAFTMFLPVM 601
           NDTV+GTF VVSKGVRDLPG++QSATSNVPSG+SLMYFGILL  G+FFVFIAFTMFLPVM
Sbjct: 63  NDTVTGTFSVVSKGVRDLPGNIQSATSNVPSGRSLMYFGILLATGVFFVFIAFTMFLPVM 122

Query: 600 VLMPQKFALCFTFGCAFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIYVSMX 421
           VLMPQKFALCFT GC+FIIGSFFALKGPKNQL+HM +KERLPFTLGF GSMVGTIYVSM 
Sbjct: 123 VLMPQKFALCFTIGCSFIIGSFFALKGPKNQLAHMSTKERLPFTLGFIGSMVGTIYVSMV 182

Query: 420 XXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 271
                             +YYAISYFPGGS+GLKFLSS LTSSIL+CFGR
Sbjct: 183 LHSYILSVLFSVLQVLALAYYAISYFPGGSAGLKFLSSALTSSILKCFGR 232


>ref|XP_002320536.1| predicted protein [Populus trichocarpa] gi|222861309|gb|EEE98851.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  298 bits (762), Expect = 2e-78
 Identities = 158/234 (67%), Positives = 174/234 (74%), Gaps = 5/234 (2%)
 Frame = -3

Query: 957 MQKTAQSWFMGGPSTNNDQKASS-----LLADWNXXXXXXXXXXXXXXXXSNLGFDLEAA 793
           MQKTAQSWF GGP T NDQK+SS     LL+DWN                    FDLEAA
Sbjct: 79  MQKTAQSWFTGGP-TFNDQKSSSSSSPSLLSDWNAYAASQESDSSAPV------FDLEAA 131

Query: 792 VRTANDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLVCGIFFVFIAFTMF 613
           VRT +D VSGTF VVSKGVRD+PGS QS+T NVPSG+S +YFGILL  G+FFVFIAFTMF
Sbjct: 132 VRTTSDKVSGTFNVVSKGVRDIPGSFQSSTINVPSGQSFVYFGILLAAGVFFVFIAFTMF 191

Query: 612 LPVMVLMPQKFALCFTFGCAFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIY 433
           LPVMVL+PQKFA+CFT GCA I+ SFFALKGPKNQL+HMISKERLPFTLGF  +MVGT+Y
Sbjct: 192 LPVMVLVPQKFAICFTIGCALIVASFFALKGPKNQLAHMISKERLPFTLGFISTMVGTVY 251

Query: 432 VSMXXXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 271
           VSM                   SYYAISYFPGGS+GLKFLSSTLT+SILRCFGR
Sbjct: 252 VSMVLHSYILSVLFSVLQVLALSYYAISYFPGGSTGLKFLSSTLTASILRCFGR 305


>ref|XP_004139775.1| PREDICTED: protein transport protein SFT2-like [Cucumis sativus]
           gi|449502881|ref|XP_004161769.1| PREDICTED: protein
           transport protein SFT2-like [Cucumis sativus]
          Length = 230

 Score =  290 bits (742), Expect = 4e-76
 Identities = 147/232 (63%), Positives = 172/232 (74%), Gaps = 3/232 (1%)
 Frame = -3

Query: 957 MQKTAQSWFMGGPSTNNDQK---ASSLLADWNXXXXXXXXXXXXXXXXSNLGFDLEAAVR 787
           MQK AQ WF  G S+ +D +   +SSLLADWN                  +G DLE+AVR
Sbjct: 1   MQKMAQGWFTQGGSSGSDNQLKTSSSLLADWNSYAESQAADDSTFNL--GIGLDLESAVR 58

Query: 786 TANDTVSGTFGVVSKGVRDLPGSLQSATSNVPSGKSLMYFGILLVCGIFFVFIAFTMFLP 607
           +AN+TVSGTF VVSKGVR+LPG+ QSATSNVPSGK+LMYFG+ L  G+FF+FIAFTMFLP
Sbjct: 59  SANETVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLP 118

Query: 606 VMVLMPQKFALCFTFGCAFIIGSFFALKGPKNQLSHMISKERLPFTLGFFGSMVGTIYVS 427
           VMVLMPQKFA+CFT GC FIIGSFFALKGPKNQL+HM SKERLPFT+ F GSM+GT+YVS
Sbjct: 119 VMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVS 178

Query: 426 MXXXXXXXXXXXXXXXXXXXSYYAISYFPGGSSGLKFLSSTLTSSILRCFGR 271
           M                   +YYA+SYFPGGS+G+KFLSS LTSS+ +CFGR
Sbjct: 179 MGLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 230


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