BLASTX nr result

ID: Coptis24_contig00005595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005595
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264007.1| PREDICTED: uncharacterized protein LOC100243...   350   6e-94
ref|XP_003546825.1| PREDICTED: uncharacterized protein LOC100804...   340   6e-91
ref|XP_003532914.1| PREDICTED: uncharacterized protein LOC100795...   339   1e-90
ref|XP_002315073.1| predicted protein [Populus trichocarpa] gi|2...   338   2e-90
ref|NP_173082.1| uncharacterized protein [Arabidopsis thaliana] ...   334   3e-89

>ref|XP_002264007.1| PREDICTED: uncharacterized protein LOC100243255 [Vitis vinifera]
            gi|297736123|emb|CBI24161.3| unnamed protein product
            [Vitis vinifera]
          Length = 275

 Score =  350 bits (897), Expect = 6e-94
 Identities = 183/275 (66%), Positives = 212/275 (77%), Gaps = 18/275 (6%)
 Frame = -1

Query: 1036 MAFVISNLSASPLFQPN---KSSSLVQKPI---------FSFPLTKLETPPKGGLQDKGG 893
            MA+++ NLS S L   +   K +S+  KPI          S   T L       LQD   
Sbjct: 1    MAYLLPNLSPSLLISSSSKSKPNSIPTKPINFNLSSSSSSSSTSTTLTNLQSSTLQDAQV 60

Query: 892  LLSSVV----EKKDVNKQERNDFYVNLGLAVRTLREDMPLLFSKDLNYSIYRDDITFIDP 725
             L +      ++++  +Q+R+DFYVNLGLAVRTLRED+PLLFSKDLNY IYRDDITF+DP
Sbjct: 61   NLQTAGAHDNQQQNQQQQQRDDFYVNLGLAVRTLREDLPLLFSKDLNYDIYRDDITFLDP 120

Query: 724  LNAFTGMEKYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIRWNLRGVPRVPWEAK 545
            LN FTG+E YKLIFWALRFHGRILFR+ISLEVFR+WQPSENVILIRWNLRGVPRVPWEAK
Sbjct: 121  LNTFTGIENYKLIFWALRFHGRILFREISLEVFRVWQPSENVILIRWNLRGVPRVPWEAK 180

Query: 544  GQFQGTSKYKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTACPTSPNPTFFWG-PA 368
            G+FQGTS+YKLDRNGKIYEHKVDNLAFNFPQ L+PAASVLDLVTACP SPNPTF WG  A
Sbjct: 181  GEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQPLKPAASVLDLVTACPASPNPTFLWGSAA 240

Query: 367  DLKSSSWLLFYRAVRETLDSEAY-LPGKERLIACS 266
            D+ SSSW+ FYRAVRETLD + + L  ++ L+ CS
Sbjct: 241  DVYSSSWVEFYRAVRETLDRQEHNLLAQDGLVTCS 275


>ref|XP_003546825.1| PREDICTED: uncharacterized protein LOC100804596 [Glycine max]
          Length = 262

 Score =  340 bits (871), Expect = 6e-91
 Identities = 167/265 (63%), Positives = 201/265 (75%), Gaps = 8/265 (3%)
 Frame = -1

Query: 1036 MAFVISNLSASPLFQPNKSSSLV--------QKPIFSFPLTKLETPPKGGLQDKGGLLSS 881
            MAF++ NL  S L Q   +            QKP   FP++   T     LQ       S
Sbjct: 1    MAFLLPNLQPSLLAQSKSNKDKANLHQTLSPQKPTSQFPISST-TCSSSSLQTAQAAQVS 59

Query: 880  VVEKKDVNKQERNDFYVNLGLAVRTLREDMPLLFSKDLNYSIYRDDITFIDPLNAFTGME 701
              + K   +Q +++FY+NLGLAVRT+RED+PL+F KDLNY IYRDDITF+DPLN FTG+E
Sbjct: 60   TPQDKQ-QQQPKDEFYLNLGLAVRTIREDLPLVFVKDLNYDIYRDDITFMDPLNTFTGIE 118

Query: 700  KYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIRWNLRGVPRVPWEAKGQFQGTSK 521
            KYKL+FWALRFHG+ILFR+I+L+V+R+WQPSENVIL+RWNLRGVPRVPWEAKG+FQGTS+
Sbjct: 119  KYKLVFWALRFHGKILFREIALDVYRVWQPSENVILVRWNLRGVPRVPWEAKGEFQGTSR 178

Query: 520  YKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTACPTSPNPTFFWGPADLKSSSWLL 341
            YKLDRNGKIYEHKVDNLAFNFPQ+++P  SVLDLVTACP SPNPTF WGP D  SSSW+ 
Sbjct: 179  YKLDRNGKIYEHKVDNLAFNFPQNIKP-VSVLDLVTACPASPNPTFLWGPVDAYSSSWIA 237

Query: 340  FYRAVRETLDSEAYLPGKERLIACS 266
            FY+AVR+TLD E  L  ++ L  CS
Sbjct: 238  FYKAVRDTLDQERSLLPQDGLATCS 262


>ref|XP_003532914.1| PREDICTED: uncharacterized protein LOC100795419 [Glycine max]
          Length = 263

 Score =  339 bits (869), Expect = 1e-90
 Identities = 166/266 (62%), Positives = 201/266 (75%), Gaps = 9/266 (3%)
 Frame = -1

Query: 1036 MAFVISNLSASPLFQPNKSSSLV--------QKPIFSFPLTKLETPPKGGLQDKGGLLSS 881
            MAF++ N+  S L Q                QKP   FP++   T     LQ     ++ 
Sbjct: 1    MAFLLPNVQPSLLAQSKSKKDKANLHQTLSPQKPTSQFPISS--TTCSSSLQTSTAQVAK 58

Query: 880  VVEKKDVNKQE-RNDFYVNLGLAVRTLREDMPLLFSKDLNYSIYRDDITFIDPLNAFTGM 704
            V    D  +Q+ +++FY+NLGL VRT+RED+PL+F KDLNY IYRDDITF+DPLN FTG+
Sbjct: 59   VSTPHDKQQQQPKDEFYLNLGLDVRTIREDLPLIFIKDLNYDIYRDDITFMDPLNTFTGI 118

Query: 703  EKYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIRWNLRGVPRVPWEAKGQFQGTS 524
            EKYKLIFWALRFHG+ILFR+I+L+V+R+WQPSENVIL+RWNLRGVPRVPWEAKG+FQGTS
Sbjct: 119  EKYKLIFWALRFHGKILFREIALDVYRVWQPSENVILVRWNLRGVPRVPWEAKGEFQGTS 178

Query: 523  KYKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTACPTSPNPTFFWGPADLKSSSWL 344
            +YKLDRNGKIYEHKVDNLAFNFPQ+++P  SVLDLVTACP SPNPTF WGP D  SSSW+
Sbjct: 179  RYKLDRNGKIYEHKVDNLAFNFPQNIKP-VSVLDLVTACPASPNPTFLWGPVDAYSSSWI 237

Query: 343  LFYRAVRETLDSEAYLPGKERLIACS 266
             FY+A+RETLD E  L  ++ L  CS
Sbjct: 238  TFYKAIRETLDQERSLLPQDGLATCS 263


>ref|XP_002315073.1| predicted protein [Populus trichocarpa] gi|222864113|gb|EEF01244.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  338 bits (867), Expect = 2e-90
 Identities = 161/214 (75%), Positives = 184/214 (85%)
 Frame = -1

Query: 946 PLTKLETPPKGGLQDKGGLLSSVVEKKDVNKQERNDFYVNLGLAVRTLREDMPLLFSKDL 767
           P  +++TPP  G QDK              + +R++FYVNLGLAVRTLRED+P+LF++DL
Sbjct: 3   PPLQVKTPP--GAQDK-------------EQHQRDEFYVNLGLAVRTLREDLPVLFTEDL 47

Query: 766 NYSIYRDDITFIDPLNAFTGMEKYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIR 587
           NY IYRDDITFIDPLN FTG++ YKLIFWALRFHG++LFR+ISLEV+RIWQPSENVILIR
Sbjct: 48  NYDIYRDDITFIDPLNTFTGIDNYKLIFWALRFHGKMLFREISLEVYRIWQPSENVILIR 107

Query: 586 WNLRGVPRVPWEAKGQFQGTSKYKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTAC 407
           WNL+GVPRVPWEAKG+FQGTS+YKLDRNGKIYEHKVDNLAFNFPQ L+PAASVLDLV AC
Sbjct: 108 WNLKGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVAAC 167

Query: 406 PTSPNPTFFWGPADLKSSSWLLFYRAVRETLDSE 305
           P SPNPTF WGPAD+ SSSW+ FYRAVRETLD E
Sbjct: 168 PASPNPTFLWGPADVYSSSWVEFYRAVRETLDRE 201


>ref|NP_173082.1| uncharacterized protein [Arabidopsis thaliana]
            gi|4966353|gb|AAD34684.1|AC006341_12 ESTs gb|T76348,
            gb|N65615 and gb|Z18119 come from this gene [Arabidopsis
            thaliana] gi|18087579|gb|AAL58920.1|AF462832_1
            At1g16320/F3O9_12 [Arabidopsis thaliana]
            gi|22655402|gb|AAM98293.1| At1g16320/F3O9_12 [Arabidopsis
            thaliana] gi|332191314|gb|AEE29435.1| uncharacterized
            protein [Arabidopsis thaliana]
          Length = 273

 Score =  334 bits (856), Expect = 3e-89
 Identities = 168/277 (60%), Positives = 210/277 (75%), Gaps = 20/277 (7%)
 Frame = -1

Query: 1036 MAFVISNLSA-------------SPLFQPNKSSS------LVQKPIFSFPLTKLETPPKG 914
            MAF++SNLS+              P+F  + SSS       V++ + +  L  +++PP  
Sbjct: 1    MAFLLSNLSSPSIHLQTGKYPNLKPIFSQSLSSSSSVSYEFVEENLSTLSLLSIQSPP-- 58

Query: 913  GLQDKGGLLSSVVEKKDVNKQERNDFYVNLGLAVRTLREDMPLLFSKDLNYSIYRDDITF 734
             L+D         + K  N  +R++FY+NLG+AVRTLRED+PLLF++DLNY IYRDDITF
Sbjct: 59   -LKDTQVQTRHSSQDKH-NNHDRDEFYINLGVAVRTLREDLPLLFTRDLNYDIYRDDITF 116

Query: 733  IDPLNAFTGMEKYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIRWNLRGVPRVPW 554
            +DP+N FTGM+ YK+IFWALRFHG+ILFRDISLE+FR+WQPSEN+ILIRWNL+GVPRVPW
Sbjct: 117  VDPMNTFTGMDNYKIIFWALRFHGKILFRDISLEIFRVWQPSENMILIRWNLKGVPRVPW 176

Query: 553  EAKGQFQGTSKYKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTACP-TSPNPTFFW 377
            EAKG+FQGTS+YKLDRNGKIYEHKVDNLAFNFPQ L+PAASVLDLVTA P +SPNPTFF+
Sbjct: 177  EAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVTASPASSPNPTFFF 236

Query: 376  GPADLKSSSWLLFYRAVRETLDSEAYLPGKERLIACS 266
             P D  SSSW+ FY+AVR TL++E      + L+ CS
Sbjct: 237  SPVDSYSSSWVKFYQAVRGTLETEDMFVTTDCLVTCS 273


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