BLASTX nr result

ID: Coptis24_contig00005583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005583
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30826.3| unnamed protein product [Vitis vinifera]              219   5e-55
ref|XP_002272049.1| PREDICTED: probable calcium-activated outwar...   219   5e-55
gb|ABX60975.1| TPK1 [Nicotiana tabacum]                               216   5e-54
ref|XP_002317301.1| outward rectifying potassium channel [Populu...   211   2e-52
ref|XP_002331863.1| outward rectifying potassium channel [Populu...   211   3e-52

>emb|CBI30826.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  219 bits (559), Expect = 5e-55
 Identities = 105/122 (86%), Positives = 116/122 (95%)
 Frame = +2

Query: 2   TVGYGDRAFNSLGGRLFASVWLLVSTLAVARAFLYLAEARIDKRHRMMAKWVLCQDMTVS 181
           TVGYGDRAF S+ GR+FAS+WLLVSTLAVARAFLYLAEAR+DKRHR MAKWVL QDMTV+
Sbjct: 191 TVGYGDRAFKSMPGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRKMAKWVLGQDMTVA 250

Query: 182 EFLAADIDNNGFVSKSEYVIYKLKEMGKIAEKDISLICNQFDRLDAGNCGKITLADLMQN 361
           EFLAADIDNNGFVSKSEYVIYKLKE+GK++EKDIS ICN+FDRLD+GNCGKITLADLM+N
Sbjct: 251 EFLAADIDNNGFVSKSEYVIYKLKELGKVSEKDISQICNKFDRLDSGNCGKITLADLMEN 310

Query: 362 QH 367
            H
Sbjct: 311 HH 312


>ref|XP_002272049.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 6-like [Vitis vinifera]
          Length = 509

 Score =  219 bits (559), Expect = 5e-55
 Identities = 105/122 (86%), Positives = 116/122 (95%)
 Frame = +2

Query: 2   TVGYGDRAFNSLGGRLFASVWLLVSTLAVARAFLYLAEARIDKRHRMMAKWVLCQDMTVS 181
           TVGYGDRAF S+ GR+FAS+WLLVSTLAVARAFLYLAEAR+DKRHR MAKWVL QDMTV+
Sbjct: 388 TVGYGDRAFKSMPGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRKMAKWVLGQDMTVA 447

Query: 182 EFLAADIDNNGFVSKSEYVIYKLKEMGKIAEKDISLICNQFDRLDAGNCGKITLADLMQN 361
           EFLAADIDNNGFVSKSEYVIYKLKE+GK++EKDIS ICN+FDRLD+GNCGKITLADLM+N
Sbjct: 448 EFLAADIDNNGFVSKSEYVIYKLKELGKVSEKDISQICNKFDRLDSGNCGKITLADLMEN 507

Query: 362 QH 367
            H
Sbjct: 508 HH 509


>gb|ABX60975.1| TPK1 [Nicotiana tabacum]
          Length = 428

 Score =  216 bits (551), Expect = 5e-54
 Identities = 102/122 (83%), Positives = 116/122 (95%)
 Frame = +2

Query: 2   TVGYGDRAFNSLGGRLFASVWLLVSTLAVARAFLYLAEARIDKRHRMMAKWVLCQDMTVS 181
           TVGYGDRAFNS+ GR+FAS+WLLVSTLAVARAFLYLAEAR+DKRHR MAKWVL QD+TVS
Sbjct: 306 TVGYGDRAFNSMAGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRKMAKWVLDQDLTVS 365

Query: 182 EFLAADIDNNGFVSKSEYVIYKLKEMGKIAEKDISLICNQFDRLDAGNCGKITLADLMQN 361
           +FLAADIDNNGFVSK+EYVIYKLKEMGKI++KD+ LIC QF+RLDAGNCG+ITLADLM++
Sbjct: 366 QFLAADIDNNGFVSKAEYVIYKLKEMGKISDKDVMLICKQFERLDAGNCGRITLADLMES 425

Query: 362 QH 367
            H
Sbjct: 426 HH 427


>ref|XP_002317301.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222860366|gb|EEE97913.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 428

 Score =  211 bits (537), Expect = 2e-52
 Identities = 104/120 (86%), Positives = 111/120 (92%)
 Frame = +2

Query: 2   TVGYGDRAFNSLGGRLFASVWLLVSTLAVARAFLYLAEARIDKRHRMMAKWVLCQDMTVS 181
           TVGYGDRAF SL GR+FAS+WLLVSTLAVARAFLYLAEAR+DKRHR MAKWVL Q MTVS
Sbjct: 307 TVGYGDRAFTSLAGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWVLGQHMTVS 366

Query: 182 EFLAADIDNNGFVSKSEYVIYKLKEMGKIAEKDISLICNQFDRLDAGNCGKITLADLMQN 361
           EFLAADIDNNGFVSKSEYVIYKLKEMGKI+EKDI  IC QF+RLD GNCGKITLADLM++
Sbjct: 367 EFLAADIDNNGFVSKSEYVIYKLKEMGKISEKDILQICQQFERLDTGNCGKITLADLMES 426


>ref|XP_002331863.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222875381|gb|EEF12512.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 435

 Score =  211 bits (536), Expect = 3e-52
 Identities = 103/121 (85%), Positives = 111/121 (91%)
 Frame = +2

Query: 2   TVGYGDRAFNSLGGRLFASVWLLVSTLAVARAFLYLAEARIDKRHRMMAKWVLCQDMTVS 181
           TVGYGDRAF SL GR+FAS+WLLVSTLAVARAFLYLAEAR+DKRHRM+AKWVL Q MTVS
Sbjct: 314 TVGYGDRAFTSLAGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMLAKWVLGQHMTVS 373

Query: 182 EFLAADIDNNGFVSKSEYVIYKLKEMGKIAEKDISLICNQFDRLDAGNCGKITLADLMQN 361
           EFLAADIDNNGFVSKSEY IYKLKEM K++EKDI  IC QFDRLD GNCGKITLADLM++
Sbjct: 374 EFLAADIDNNGFVSKSEYAIYKLKEMEKVSEKDILQICQQFDRLDTGNCGKITLADLMES 433

Query: 362 Q 364
           Q
Sbjct: 434 Q 434


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