BLASTX nr result

ID: Coptis24_contig00005548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005548
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002969258.1| hypothetical protein SELMODRAFT_410210 [Sela...    82   4e-14
ref|XP_002986853.1| hypothetical protein SELMODRAFT_446760 [Sela...    82   4e-14

>ref|XP_002969258.1| hypothetical protein SELMODRAFT_410210 [Selaginella moellendorffii]
           gi|300162734|gb|EFJ29346.1| hypothetical protein
           SELMODRAFT_410210 [Selaginella moellendorffii]
          Length = 369

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = +2

Query: 17  PTLIVCNPVTSTHRVLPDLPQVRYIDIVGMVASG-DYYKILITGTTEPTSNDSITEVYDS 193
           P L+VCNP+T + R+LP L ++  I ++GM+ SG + YKIL+ G    +S + ITE+YDS
Sbjct: 123 PLLLVCNPLTKSCRILPGLSRITLIYVMGMMESGWNSYKILVAGVASSSSQELITEIYDS 182

Query: 194 RTGVWEQHSCSEEEFLFFWYEVHAIWHDGFFY 289
            +G WE  S +  +    +  + A+W DGFFY
Sbjct: 183 ASGGWECQSSARLDAFQDFSGMRAVWSDGFFY 214


>ref|XP_002986853.1| hypothetical protein SELMODRAFT_446760 [Selaginella moellendorffii]
           gi|300145507|gb|EFJ12183.1| hypothetical protein
           SELMODRAFT_446760 [Selaginella moellendorffii]
          Length = 369

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = +2

Query: 17  PTLIVCNPVTSTHRVLPDLPQVRYIDIVGMVASG-DYYKILITGTTEPTSNDSITEVYDS 193
           P L+VCNP+T + R+LP L ++  I ++GM+ SG + YKIL+ G    +S + ITE+YDS
Sbjct: 123 PLLLVCNPLTKSCRILPGLSRITLIYVMGMMESGWNSYKILVAGVASSSSQELITEIYDS 182

Query: 194 RTGVWEQHSCSEEEFLFFWYEVHAIWHDGFFY 289
            +G WE  S +  +    +  + A+W DGFFY
Sbjct: 183 ASGGWECQSSARLDAFQDFSGMRAVWSDGFFY 214


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