BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005541
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322466.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854...    81   1e-13
ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex ...    81   1e-13
ref|XP_002456824.1| hypothetical protein SORBIDRAFT_03g043530 [S...    78   8e-13
gb|AAF16748.1|AC010155_1 F3M18.1 [Arabidopsis thaliana] gi|66912...    77   1e-12

>ref|XP_002322466.1| predicted protein [Populus trichocarpa] gi|222869462|gb|EEF06593.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 39/66 (59%), Positives = 53/66 (80%)
 Frame = -1

Query: 198 KLSNVSEHIPIPYPQVILCVQVYKMSKIWVKTQEFLVLGSQMLSELRDQIYCLTDHLMQK 19
           K S++ EHI +  P+V++CV++Y   + W KTQEFLVLG Q L+E+RD+IYCLTD +MQK
Sbjct: 61  KSSDLQEHIAVMLPEVVICVEIYHCIRKWFKTQEFLVLGGQTLTEMRDKIYCLTDQMMQK 120

Query: 18  AGEHDP 1
           AG+HDP
Sbjct: 121 AGQHDP 126


>ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854109 [Vitis vinifera]
          Length = 443

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/66 (53%), Positives = 46/66 (69%)
 Frame = -1

Query: 198 KLSNVSEHIPIPYPQVILCVQVYKMSKIWVKTQEFLVLGSQMLSELRDQIYCLTDHLMQK 19
           K SN+  H+   Y   +LC+++Y   + WVK QEFLVLG Q L+ELRD I C TD +MQK
Sbjct: 190 KSSNIHGHVMEHYEDAVLCIEIYHSRRTWVKAQEFLVLGRQTLTELRDNICCATDQVMQK 249

Query: 18  AGEHDP 1
           AG+H+P
Sbjct: 250 AGKHNP 255


>ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex subunit 3-like, partial
           [Vitis vinifera]
          Length = 315

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/66 (53%), Positives = 46/66 (69%)
 Frame = -1

Query: 198 KLSNVSEHIPIPYPQVILCVQVYKMSKIWVKTQEFLVLGSQMLSELRDQIYCLTDHLMQK 19
           K SN+  H+   Y   +LC+++Y   + WVK QEFLVLG Q L+ELRD I C TD +MQK
Sbjct: 62  KSSNIHGHVMEHYEDAVLCIEIYHSRRTWVKAQEFLVLGRQTLTELRDNICCATDQVMQK 121

Query: 18  AGEHDP 1
           AG+H+P
Sbjct: 122 AGKHNP 127


>ref|XP_002456824.1| hypothetical protein SORBIDRAFT_03g043530 [Sorghum bicolor]
           gi|241928799|gb|EES01944.1| hypothetical protein
           SORBIDRAFT_03g043530 [Sorghum bicolor]
          Length = 571

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/59 (61%), Positives = 47/59 (79%)
 Frame = -1

Query: 180 EHIPIPYPQVILCVQVYKMSKIWVKTQEFLVLGSQMLSELRDQIYCLTDHLMQKAGEHD 4
           EH P+ +P+VILCV+VY+ +   VK+QE LVLGSQ L++LRD I CLTD LM+ AG+HD
Sbjct: 325 EHRPVVHPEVILCVEVYQKTYASVKSQELLVLGSQFLTDLRDNICCLTDKLMKVAGQHD 383


>gb|AAF16748.1|AC010155_1 F3M18.1 [Arabidopsis thaliana] gi|6691212|gb|AAF24550.1|AC007508_13
           F1K23.20 [Arabidopsis thaliana]
          Length = 482

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = -1

Query: 198 KLSNVSEHIPIPYPQVILCVQVYKMSKIWVKTQEFLVLGSQMLSELRDQIYCLTDHLMQK 19
           K S++   +   +P+VILCV++Y   K  VKTQEFLVLG QML+EL+D I+C TD +MQK
Sbjct: 234 KPSDIQGQVDPLFPEVILCVEIYNSRK--VKTQEFLVLGRQMLTELKDNIHCATDQVMQK 291

Query: 18  AGEHDP 1
           AG++DP
Sbjct: 292 AGKYDP 297