BLASTX nr result

ID: Coptis24_contig00005527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005527
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containi...   261   6e-68
emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]   260   8e-68
ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containi...   231   5e-59
ref|XP_003590730.1| Pentatricopeptide repeat-containing protein ...   223   1e-56
ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|2...   220   9e-56

>ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  261 bits (666), Expect = 6e-68
 Identities = 119/181 (65%), Positives = 151/181 (83%), Gaps = 2/181 (1%)
 Frame = +2

Query: 2   GNNGFSEDLWKFVKQMQGEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGL--D 175
           GN  F E+ W+FVKQMQ + +R DA+T+SSLLPLC    GKWD+GRE+HC ++KN L   
Sbjct: 204 GNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLG 263

Query: 176 VDSDVHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNGCSEEGLTLFR 355
           +DSDVH+G CLIDMYSR   VV+GRR+FDRMKCRNV SWT++++ YV+NG S+E L+LFR
Sbjct: 264 LDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFR 323

Query: 356 EMQLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEISLSNALIDMYSKC 535
           +MQ+IDGIEPNRVSL+S+LPAC+S   L+ G+QIHGF++RKE N+E+SL NALIDMYSKC
Sbjct: 324 DMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKC 383

Query: 536 G 538
           G
Sbjct: 384 G 384



 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 55/181 (30%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
 Frame = +2

Query: 8   NGFSEDLWKFVKQMQG-EGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDVDS 184
           NG S++     + MQ  +GI  +  ++ S+LP C   +G    GR+IH   ++   ++++
Sbjct: 312 NGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLS-GRQIHGFAVRK--ELNN 368

Query: 185 DVHVGSCLIDMYSRRKNVVLGRRIF-DRMKCRNVVSWTSIVSAYVQNGCSEEGLTLFREM 361
           +V + + LIDMYS+  ++   RR+F D   C++ +SW+S++S Y  +G  +E + L+ +M
Sbjct: 369 EVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKM 428

Query: 362 QLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHE--ISLSNALIDMYSKC 535
            L  GI P+ ++ + IL AC+  G + EG  I+  S+  +Y  E  + +   ++DM  + 
Sbjct: 429 -LQAGIRPDMITTVGILSACSRSGLVNEGLNIYS-SVINDYGIEPTLEIFACIVDMLGRA 486

Query: 536 G 538
           G
Sbjct: 487 G 487



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/134 (30%), Positives = 72/134 (53%)
 Frame = +2

Query: 137 REIHCVVMKNGLDVDSDVHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYV 316
           R+ H  ++  GL  +S   + + LI  Y+  ++    R +FD ++ +NV  W S+++ Y 
Sbjct: 43  RQSHSRILSLGLSQNS--LLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYA 100

Query: 317 QNGCSEEGLTLFREMQLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEI 496
           +N    E   LF +M   D + P+  +L ++    + LG L  GK IHG SIR  +  + 
Sbjct: 101 KNRLYNEAFQLFNQMCSSD-VLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDT 159

Query: 497 SLSNALIDMYSKCG 538
            ++N+++ MY KCG
Sbjct: 160 VVANSIMSMYCKCG 173



 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
 Frame = +2

Query: 8   NGFSEDLWKFVKQMQGEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDVDSD 187
           N    + ++   QM    +  D FT+S+L  +     G    G+ IH   ++ G    SD
Sbjct: 102 NRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSS-ELGALFSGKSIHGKSIRIGFV--SD 158

Query: 188 VHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNG-CS--EEGLTLFRE 358
             V + ++ MY +  N    R++FD M  RN  SW  +++ Y  +G C+  EE     ++
Sbjct: 159 TVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQ 218

Query: 359 MQLIDGIEPNRVSLISILPACT-SLGTLMEGKQIHGFSIRKE----YNHEISLSNALIDM 523
           MQ+ D + P+  ++ S+LP C    G    G+++H + ++ E     + ++ L   LIDM
Sbjct: 219 MQM-DEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDM 277

Query: 524 YSK 532
           YS+
Sbjct: 278 YSR 280


>emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score =  260 bits (665), Expect = 8e-68
 Identities = 118/181 (65%), Positives = 151/181 (83%), Gaps = 2/181 (1%)
 Frame = +2

Query: 2   GNNGFSEDLWKFVKQMQGEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGL--D 175
           GN  F E+ W+FVKQMQ + +R DA+T+SSLLPLC    GKWD+GRE+HC ++KN L   
Sbjct: 204 GNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLG 263

Query: 176 VDSDVHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNGCSEEGLTLFR 355
           +DSDVH+G CLIDMYSR   VV+GRR+FDRMKCRNV SWT++++ YV+NG S+E L+LFR
Sbjct: 264 LDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFR 323

Query: 356 EMQLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEISLSNALIDMYSKC 535
           +MQ+IDG+EPNRVSL+S+LPAC+S   L+ G+QIHGF++RKE N+E+SL NALIDMYSKC
Sbjct: 324 DMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKC 383

Query: 536 G 538
           G
Sbjct: 384 G 384



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 54/181 (29%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
 Frame = +2

Query: 8   NGFSEDLWKFVKQMQG-EGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDVDS 184
           NG S++     + MQ  +G+  +  ++ S+LP C   +G    GR+IH   ++   ++++
Sbjct: 312 NGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLS-GRQIHGFAVRK--ELNN 368

Query: 185 DVHVGSCLIDMYSRRKNVVLGRRIF-DRMKCRNVVSWTSIVSAYVQNGCSEEGLTLFREM 361
           +V + + LIDMYS+  ++   RR+F D   C++ +SW+S++S Y  +G  +E + L+ +M
Sbjct: 369 EVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKM 428

Query: 362 QLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHE--ISLSNALIDMYSKC 535
            L  GI P+ ++ + IL AC   G + EG  I+  S+  +Y  E  + +   ++DM  + 
Sbjct: 429 -LQAGIRPDMITTVGILSACGRSGLVNEGLNIYS-SVINDYGIEPTLEICACIVDMLGRA 486

Query: 536 G 538
           G
Sbjct: 487 G 487



 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
 Frame = +2

Query: 8   NGFSEDLWKFVKQMQGEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDVDSD 187
           N    + ++   QM    +  D FT+S+L  +     G    G+ IH   ++ G    SD
Sbjct: 102 NRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSS-ELGALFSGKSIHGKSIRTGFV--SD 158

Query: 188 VHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNG-CS--EEGLTLFRE 358
             V + ++ MY +  N    R++FD M  RN  SW  +++ Y  +G C+  EE     ++
Sbjct: 159 TVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQ 218

Query: 359 MQLIDGIEPNRVSLISILPACT-SLGTLMEGKQIHGFSIRKE----YNHEISLSNALIDM 523
           MQ+ D + P+  ++ S+LP C   +G    G+++H + ++ E     + ++ L   LIDM
Sbjct: 219 MQM-DEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDM 277

Query: 524 YSK 532
           YS+
Sbjct: 278 YSR 280



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 41/134 (30%), Positives = 72/134 (53%)
 Frame = +2

Query: 137 REIHCVVMKNGLDVDSDVHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYV 316
           R+ H  ++  GL  +S   + + LI  Y+  ++    R +FD ++ +NV  W S+++  V
Sbjct: 43  RQSHSRILSLGLSQNS--FLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCV 100

Query: 317 QNGCSEEGLTLFREMQLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEI 496
           +N    E   LF +M   D + P+  +L ++    + LG L  GK IHG SIR  +  + 
Sbjct: 101 KNRLYNEAFQLFNQMCSSD-VLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDT 159

Query: 497 SLSNALIDMYSKCG 538
            ++N+++ MY KCG
Sbjct: 160 VVANSIMSMYCKCG 173


>ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  231 bits (589), Expect = 5e-59
 Identities = 113/175 (64%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
 Frame = +2

Query: 20  EDLWKFVKQMQGEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDV--DSDVH 193
           +DL  F  +MQ EG + DAFTV+SLLP+C   TGKWD+GRE+HC V+KNGLD+  DSDVH
Sbjct: 217 DDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSDVH 276

Query: 194 VGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNGCSEEGLTLFREMQLID 373
           +GS LIDMYSR K VVLGRR+FD+MK RNV  WT++++ YVQNG  ++ L L R MQ+ D
Sbjct: 277 LGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLRAMQMKD 336

Query: 374 GIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEISLSNALIDMYSKCG 538
           GI PN+VSLIS LPAC  L  L+ GKQIHGFSI+ E N ++SL NALIDMYSKCG
Sbjct: 337 GIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCG 391



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 53/180 (29%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
 Frame = +2

Query: 8   NGFSEDLWKFVKQMQ-GEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDVDS 184
           NG  +D    ++ MQ  +GIR +  ++ S LP CG   G    G++IH   +K  ++++ 
Sbjct: 319 NGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIG-GKQIHGFSIK--MELND 375

Query: 185 DVHVGSCLIDMYSRRKNVVLGRRIFDRMKC-RNVVSWTSIVSAYVQNGCSEEGLTLFREM 361
           DV + + LIDMYS+  ++   RR F+     ++ ++W+S++SAY  +G  EE +  + +M
Sbjct: 376 DVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKM 435

Query: 362 QLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRK-EYNHEISLSNALIDMYSKCG 538
            L  G +P+ ++++ +L AC+  G + EG  I+   + K E    + +   ++DM  + G
Sbjct: 436 -LQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSG 494



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/134 (27%), Positives = 72/134 (53%)
 Frame = +2

Query: 137 REIHCVVMKNGLDVDSDVHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYV 316
           ++ H  ++ NG     +  + + L+  Y+    +   R +F+ ++ ++V  W S+++ YV
Sbjct: 48  QQSHAQILANGFA--QNAFLATRLVSAYATCGELATSRFVFESVEAKSVYLWNSLINGYV 105

Query: 317 QNGCSEEGLTLFREMQLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEI 496
           +N    + L LFREM   +G+ P+  +L ++      L  L+ GK IHG  IR  +  ++
Sbjct: 106 KNHDFRQALALFREMGR-NGMLPDDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDV 164

Query: 497 SLSNALIDMYSKCG 538
            + N+L+ MY +CG
Sbjct: 165 VVGNSLMSMYCRCG 178


>ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479778|gb|AES60981.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 627

 Score =  223 bits (568), Expect = 1e-56
 Identities = 111/183 (60%), Positives = 137/183 (74%), Gaps = 4/183 (2%)
 Frame = +2

Query: 2   GNNGFS--EDLWKFVKQMQGEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLD 175
           GN  +S   DLW F ++MQ +G   DAFTV+SLLP+C  S GK+DHGRE+HC ++KNGLD
Sbjct: 206 GNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLD 265

Query: 176 VD--SDVHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNGCSEEGLTL 349
           +   SDVH+GS LIDMYSR   +VL RR+FD+MK RN+  WT++++ YVQNG  E  L L
Sbjct: 266 LKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALIL 325

Query: 350 FREMQLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEISLSNALIDMYS 529
           FREMQ  D I PNRVSL+S+LPAC  L  LM GKQ+H FSI+ E+N  ISL NALIDMY+
Sbjct: 326 FREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYA 385

Query: 530 KCG 538
           KCG
Sbjct: 386 KCG 388



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 53/181 (29%), Positives = 101/181 (55%), Gaps = 4/181 (2%)
 Frame = +2

Query: 8   NGFSEDLWKFVKQMQGEG-IRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDVDS 184
           NG  E      ++MQ +  IR +  ++ S+LP CG   G    G+++H   +K  ++ + 
Sbjct: 316 NGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMG-GKQVHAFSIK--MEFND 372

Query: 185 DVHVGSCLIDMYSRRKNVVLGRRIFDRMK-CRNVVSWTSIVSAYVQNGCSEEGLTLFREM 361
            + + + LIDMY++  ++   RR+FD     ++ ++W+SI+SAY  +G  +E LT + EM
Sbjct: 373 YISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEM 432

Query: 362 QLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHE--ISLSNALIDMYSKC 535
            L  GI+P+ ++++ +L AC   G + EG  I+  S+  EY  +  + +   ++D+  + 
Sbjct: 433 -LQQGIKPDMITVVGVLSACCRSGLVDEGISIYN-SLTTEYEMKPSVEICGCVVDLLGRS 490

Query: 536 G 538
           G
Sbjct: 491 G 491



 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 32/110 (29%), Positives = 61/110 (55%)
 Frame = +2

Query: 206 LIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNGCSEEGLTLFREMQLIDGIEP 385
           LI  Y+   + ++ + +FD +  +NV  W S+++ YV+N   +  + LFR+M     + P
Sbjct: 67  LISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRC--LLP 124

Query: 386 NRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEISLSNALIDMYSKC 535
           +  +L +I      +  L+ GK IHG S+R  +  +I + N+++ MY +C
Sbjct: 125 DDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRC 174



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
 Frame = +2

Query: 44  QMQGEGIRLDAFTVSSLLPLCG----FSTGKWDHGREIHCVVMKNGLDVDSDVHVGSCLI 211
           +  G  +  D +T++++  + G       GK  HG+ +        +   SD+ VG+ ++
Sbjct: 116 RQMGRCLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLR-------IGFVSDIVVGNSVM 168

Query: 212 DMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNGCSEEGL-----TLFREMQLIDG 376
            MY R +      ++FD M  RNV S+  I+S     G  +  L       FR MQ   G
Sbjct: 169 SMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQ-CQG 227

Query: 377 IEPNRVSLISILP-ACTSLGTLMEGKQIHGFSIRKEYN----HEISLSNALIDMYSK 532
              +  ++ S+LP  C S G    G+++H + ++   +     ++ + ++LIDMYS+
Sbjct: 228 YNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSR 284


>ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|222863556|gb|EEF00687.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  220 bits (561), Expect = 9e-56
 Identities = 105/181 (58%), Positives = 141/181 (77%), Gaps = 2/181 (1%)
 Frame = +2

Query: 2   GNNGFSEDLWKFVKQMQGEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDVD 181
           G+  F +++  FVK MQ EG++ DAFTVSSLL LC    GK DHGRE+H  +++  L V 
Sbjct: 208 GDRNFDKEVSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVG 267

Query: 182 S--DVHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNGCSEEGLTLFR 355
           S  +VH+G CLIDMYSR   V +GRR+FDRM+CRNV +WT++++ +VQNG  EEGL LF 
Sbjct: 268 SGTEVHLGCCLIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFH 327

Query: 356 EMQLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEISLSNALIDMYSKC 535
           EMQ+ DG+EPN+VSL+S+LPAC+++  L   KQIHG++IRK++N+++SL NALIDMYSKC
Sbjct: 328 EMQVRDGVEPNKVSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKC 387

Query: 536 G 538
           G
Sbjct: 388 G 388



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 8/184 (4%)
 Frame = +2

Query: 5   NNGFSEDLWKFVKQMQGEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDVDS 184
           N  ++E    F  QM   G+ LD +T++++  +C    G  + G+ IH   +K G  +D 
Sbjct: 106 NRAYNEAFGWFY-QMCCRGVLLDDYTLATMSKVC-HEIGDLNAGKLIHGKSLKTGFVLD- 162

Query: 185 DVHVGSCLIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNG---CSEEGLTLFR 355
            V V + L+ MYS+        ++FD M  RNV SW  I+S Y  +G     +E     +
Sbjct: 163 -VIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFVK 221

Query: 356 EMQLIDGIEPNRVSLISILPACTS-LGTLMEGKQIHGFSIRKEY----NHEISLSNALID 520
           +MQ I+G++P+  ++ S+L  C   +G    G+++HGF +R E       E+ L   LID
Sbjct: 222 DMQ-IEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLID 280

Query: 521 MYSK 532
           MYS+
Sbjct: 281 MYSR 284



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 45/180 (25%), Positives = 94/180 (52%), Gaps = 2/180 (1%)
 Frame = +2

Query: 5   NNGFSEDLWKFVKQMQGEGIRLDAFTVSSLLPLCGFSTGKWDHGREIHCVVMKNGLDVDS 184
           N    E L  F +    +G+  +  ++ S+LP C    G     ++IH   ++     ++
Sbjct: 316 NGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPACSAVAGLTGV-KQIHGYAIRK--QFNN 372

Query: 185 DVHVGSCLIDMYSRRKNVVLGRRIFDRMKC-RNVVSWTSIVSAYVQNGCSEEGLTLFREM 361
           DV + + LIDMYS+  ++   +++F+     R+ +SW+S++S Y  +G  EE + ++ +M
Sbjct: 373 DVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKM 432

Query: 362 QLIDGIEPNRVSLISILPACTSLGTLMEGKQIHGFSIRK-EYNHEISLSNALIDMYSKCG 538
             + G +P+ ++++ +L AC+  G + EG  I+  +I K      + +   ++DM  + G
Sbjct: 433 LQL-GNKPDMITIVGVLSACSRAGLVDEGLCIYKSAINKYRIKPTVEICACVVDMLGRSG 491



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/111 (30%), Positives = 60/111 (54%)
 Frame = +2

Query: 206 LIDMYSRRKNVVLGRRIFDRMKCRNVVSWTSIVSAYVQNGCSEEGLTLFREMQLIDGIEP 385
           LI  Y+      L R +FD +  ++V  W S+++ +V+N    E    F +M    G+  
Sbjct: 68  LISAYAIFGVPALSRLVFDSLHFKSVYLWNSLINGFVKNRAYNEAFGWFYQM-CCRGVLL 126

Query: 386 NRVSLISILPACTSLGTLMEGKQIHGFSIRKEYNHEISLSNALIDMYSKCG 538
           +  +L ++   C  +G L  GK IHG S++  +  ++ ++N+L+ MYSKCG
Sbjct: 127 DDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIVANSLMSMYSKCG 177


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