BLASTX nr result

ID: Coptis24_contig00005505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005505
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271985.2| PREDICTED: uncharacterized protein LOC100243...   277   3e-72
ref|XP_003610505.1| hypothetical protein MTR_4g132940 [Medicago ...   269   9e-70
ref|XP_002317198.1| predicted protein [Populus trichocarpa] gi|2...   258   2e-66
ref|XP_003594199.1| hypothetical protein MTR_2g025520 [Medicago ...   254   2e-65
ref|XP_003547277.1| PREDICTED: uncharacterized protein LOC100807...   254   3e-65

>ref|XP_002271985.2| PREDICTED: uncharacterized protein LOC100243092 [Vitis vinifera]
          Length = 301

 Score =  277 bits (708), Expect = 3e-72
 Identities = 154/298 (51%), Positives = 198/298 (66%), Gaps = 22/298 (7%)
 Frame = +3

Query: 75  RFKRVTAGFDEVARARLCESSGSEHSE-DNSADLSDLIDSFMERN----DGNEKDDIVDK 239
           RFKRV+A FD+VARARLC+SSGS+HSE D+S +LSDL+DSF+ER+       ++D  +++
Sbjct: 4   RFKRVSAAFDDVARARLCDSSGSDHSEEDDSEELSDLVDSFLERDVIELQVGDEDGKMEE 63

Query: 240 HRDIYDGV--WSDSETLELLQSLVA----LDGVDGDVKKTIRDEAERACCMVGISSSEGF 401
            R  +D    WSDS T E+LQSL++     D  D DVK+ IRDE E  C  +    +EGF
Sbjct: 64  ERSDFDSENRWSDSLTREMLQSLISGDDGNDDGDDDVKRKIRDELEVKCRSLENCQAEGF 123

Query: 402 KRRLMSRLRERGFDAGLCKSRWERSGQYPAGSYEYIDVVVAGKRYFVQVSLAGQFTIARP 581
           KRRLM+ LR RGFDAGLCKSRWE++G+ P G YEYIDVVVA  RY V+V LAG+FTIARP
Sbjct: 124 KRRLMTLLRRRGFDAGLCKSRWEKTGRCPGGEYEYIDVVVAESRYVVEVFLAGEFTIARP 183

Query: 582 ANCYVSFLNTLPQIFVGKAEEMKQVVKIMCRAMKESIKRNDLYLPPWRRNGYMQAKWFGS 761
            + Y + L   P + V K  E+KQ+V++MC  MK+S+K  D+ +PPWR+NGYMQAKWFG 
Sbjct: 184 TSYYQTLLRLFPCVMVVKQFELKQMVRLMCAEMKKSMKIRDMPVPPWRKNGYMQAKWFGP 243

Query: 762 YKRTTNVGSGAENLMRFEKLPG-------FYGNCRVEIVKKV----GNLTQAFNGLPL 902
           YKRT N     ++    E L G          NC  E V+KV    G + Q  NG+ L
Sbjct: 244 YKRTVNAIPTGKSSDSSEGLAGKGLIGLPVVYNCSGEFVRKVGFRSGRMGQVLNGMEL 301


>ref|XP_003610505.1| hypothetical protein MTR_4g132940 [Medicago truncatula]
           gi|355511560|gb|AES92702.1| hypothetical protein
           MTR_4g132940 [Medicago truncatula]
          Length = 287

 Score =  269 bits (687), Expect = 9e-70
 Identities = 147/284 (51%), Positives = 192/284 (67%), Gaps = 9/284 (3%)
 Frame = +3

Query: 66  LPTRFKRVTAGF--DEVARARLCESSGSEHSEDNSADLSDLIDSFMERNDGNEKDDIVDK 239
           +P RF+RV A F  DEVAR RLCESSGSEHS ++S DLSDL+ SF+E+N    ++D V  
Sbjct: 8   IPVRFERVAAAFESDEVARVRLCESSGSEHSPESSTDLSDLVKSFLEKNSVRAEEDAVAF 67

Query: 240 HRDIYDGVWSD-SETLELLQSLVALDGVDGDVKKTIRDEAERACCMVG-ISSSEGFKRRL 413
            ++  D  W D  E  E+L+ +      +  VK+ IR EAE A  +VG   SS GFKR +
Sbjct: 68  DKEDRDFEWYDYEEKREILKEIF-----NDTVKEKIRREAELAIEVVGGDKSSPGFKRMV 122

Query: 414 MSRLRERGFDAGLCKSRWERSGQYPAGSYEYIDVVVAGKRYFVQVSLAGQFTIARPANCY 593
           MSRLRERGFDAGLCKS+WER+ ++P+G YEYIDV   G RY V+ SL  +F IARP N Y
Sbjct: 123 MSRLRERGFDAGLCKSKWERNRKFPSGDYEYIDVNYGGNRYIVETSLMAEFEIARPTNQY 182

Query: 594 VSFLNTLPQIFVGKAEEMKQVVKIMCRAMKESIKRNDLYLPPWRRNGYMQAKWFGSYKRT 773
            S L+  P +FVGK EE+K+VV+IMC A+K+S+K  D+++PPWRRN YMQAKWF +YKRT
Sbjct: 183 TSLLDVFPLVFVGKVEELKRVVRIMCSAIKDSMKTMDMHVPPWRRNSYMQAKWFNTYKRT 242

Query: 774 TNVGSGAENLMRFEKLPGFYGNCR-----VEIVKKVGNLTQAFN 890
           TN  +  +++  FE  P    NC+      +I  +VG+L   FN
Sbjct: 243 TNEVATNKSI-TFEARPLKAYNCKDVYYGSKIAVRVGHLAAKFN 285


>ref|XP_002317198.1| predicted protein [Populus trichocarpa] gi|222860263|gb|EEE97810.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  258 bits (659), Expect = 2e-66
 Identities = 152/324 (46%), Positives = 203/324 (62%), Gaps = 51/324 (15%)
 Frame = +3

Query: 69  PTRFKRVTAGFDEVARA-RLCESSGSEH--SEDNSADLSDLIDSFMER-----------N 206
           P RFKRV A F+E +RA RLCESSGSEH   ++NSADLSDL++SF+ER           +
Sbjct: 6   PVRFKRVAAAFNEASRAIRLCESSGSEHYSPDNNSADLSDLVNSFIEREYRNQFRGGGDH 65

Query: 207 DGNEKDDI----------------VDKHRDIYDGVWSDSETLELLQSLVALDGVDGDVKK 338
           D  E D++                +D+H +  D + S SET + L++L+     D DV++
Sbjct: 66  DKKEDDNLAHQDQKDHHRPQSKHSIDQHDESLD-ICSYSETKDTLENLLNSIEDDDDVRQ 124

Query: 339 TIRDEAERACCMVG----ISSSEGFKRRLMSRLRERGFDAGLCKSRWERSGQYPAGSYEY 506
            IR E E AC ++G    +SS   FKR LMS LR+RGFDAGLCKSRWE+ G++PAG YEY
Sbjct: 125 KIRKETELACGIIGERSSLSSHLDFKRGLMSHLRDRGFDAGLCKSRWEKFGRHPAGDYEY 184

Query: 507 IDVVVAGKRYFVQVSLAGQFTIARPANCYVSFLNTLPQIFVGKAEEMKQVVKIMCRAMKE 686
           +DV V+GKRY V+V LAG+F IARP + Y   L   P++++GK EE+KQ+V++MC AM+E
Sbjct: 185 VDVNVSGKRYIVEVFLAGEFIIARPTSHYTELLQVFPRVYIGKPEEVKQIVRLMCNAMRE 244

Query: 687 SIKRNDLYLPPWRRNGYMQAKWFGSYKRTTN-VGS------------GAENLMRFEKLPG 827
           S+K   + + PWRR GYM+AKWFG YKRTTN V S             A  +  FE LP 
Sbjct: 245 SMKGVGMPVAPWRRYGYMEAKWFGHYKRTTNEVPSRRKGTKSDHEVISARRVAGFEPLPV 304

Query: 828 FYGNCRVEIVKK----VGNLTQAF 887
              +C+ ++V K    V +LT AF
Sbjct: 305 RVYHCKDDLVSKGGSGVSHLTAAF 328


>ref|XP_003594199.1| hypothetical protein MTR_2g025520 [Medicago truncatula]
           gi|124359329|gb|ABN05810.1| Protein of unknown function
           DUF506, plant [Medicago truncatula]
           gi|355483247|gb|AES64450.1| hypothetical protein
           MTR_2g025520 [Medicago truncatula]
          Length = 321

 Score =  254 bits (649), Expect = 2e-65
 Identities = 147/313 (46%), Positives = 196/313 (62%), Gaps = 37/313 (11%)
 Frame = +3

Query: 63  SLPTRFKRVTAGFDE---VARARLC-ESSGSEHSEDNSADLSDLIDSFMERND-GNEKDD 227
           ++P RF+RV   FD    ++R +LC ESSGSEHS ++S DLSDL+ SFME ++   E+ D
Sbjct: 3   NVPMRFQRVMEAFDADVALSRGKLCSESSGSEHSPESSPDLSDLVLSFMEDSERSGEEKD 62

Query: 228 IVDKHRDIYD---------GVWSDSETLELLQSLVA-----LDGVDGDVKKTIRDEAERA 365
           +V + +D            G W DSE  E+L+ L       +D  + D K+ IR E E A
Sbjct: 63  VVARSKDCDGKGAEDVEEIGEWCDSEKNEILKGLFGGNEDVVDEDEKDAKERIRREVELA 122

Query: 366 CCMVGISSSEGFKRRLMSRLRERGFDAGLCKSRWERSGQYPAGSYEYIDVVVAGKRYFVQ 545
             ++G  S  GFKR LMS LRE+GFDAGLCK++WE+ G+  AG YEYIDV ++GKRY ++
Sbjct: 123 IGLLGSDSFPGFKRSLMSCLREKGFDAGLCKTKWEKKGKLTAGDYEYIDVNLSGKRYIIE 182

Query: 546 VSLAGQFTIARPANCYVSFLNTLPQIFVGKAEEMKQVVKIMCRAMKESIKRNDLYLPPWR 725
           VSLA +F IARP N Y S LN  P+IFVGK EE+K++V++MC A+K S+K+ DL++PPWR
Sbjct: 183 VSLAAEFEIARPTNQYSSLLNIFPKIFVGKMEELKRIVRLMCSAIKGSMKKMDLHIPPWR 242

Query: 726 RNGYMQAKWFGSYKRTTNVGSGAENLMRF-------EKLPGFYG------NCRVEIVK-- 860
           RN YMQ KWF SYKRTTN  +  +    F       +K  GF        NCR + V   
Sbjct: 243 RNLYMQTKWFSSYKRTTNAVATIKASSHFSVESFCPKKFMGFEARHVKAYNCRDDYVGIN 302

Query: 861 ---KVGNLTQAFN 890
              +VG+L  A N
Sbjct: 303 NGFRVGHLAAALN 315


>ref|XP_003547277.1| PREDICTED: uncharacterized protein LOC100807096 [Glycine max]
          Length = 312

 Score =  254 bits (648), Expect = 3e-65
 Identities = 151/306 (49%), Positives = 191/306 (62%), Gaps = 31/306 (10%)
 Frame = +3

Query: 66  LPTRFKRVTAGFD-EVARARLCESSGSEHSEDNSADLSDLIDSFMERNDGNEKDDIVDKH 242
           +P RF+RV A FD +VAR  LCESSGSEHS ++  DLSDL+ SFME+N+    +   ++ 
Sbjct: 4   IPVRFQRVAAAFDADVARVGLCESSGSEHSPESLTDLSDLVKSFMEKNEATTGEKEEEEV 63

Query: 243 RDIYDG---------VWSDSETLELLQSLVALDGVDGDV---KKTIRDEAERACCMVGIS 386
            D+ +G          WS SE  E+L+SL+  +  D D    K+ IR EAE A    G+ 
Sbjct: 64  GDVREGHDEEEFEKTEWSYSEKREMLRSLLYENDDDEDERDDKEKIRREAEVA---FGVV 120

Query: 387 SSEGFKRRLMSRLRERGFDAGLCKSRWERSGQYPAGSYEYIDVVVAGKRYFVQVSLAGQF 566
                KRRLMS LRE+GFDAGLCKS+WE++G+  AG YEYIDV   GKRY V+VSLAG+F
Sbjct: 121 VGNYSKRRLMSLLREKGFDAGLCKSKWEKNGRLTAGDYEYIDVNFKGKRYIVEVSLAGKF 180

Query: 567 TIARPANCYVSFLNTLPQIFVGKAEEMKQVVKIMCRAMKESIKRNDLYLPPWRRNGYMQA 746
            IARP + Y S L+  P IFVGK EEMKQV ++MC A+K S+KR +L++PPWRRN YMQA
Sbjct: 181 EIARPTDQYSSLLDVFPLIFVGKVEEMKQVARLMCTALKGSMKRMNLHIPPWRRNMYMQA 240

Query: 747 KWFGSYKRTTNVG---------SGAENL-----MRFEKLPGFYGNCRVEIVK----KVGN 872
           KWF +YKRTTN           S  E+L     M FE  P    NCR         ++G+
Sbjct: 241 KWFSAYKRTTNAVATKRASLPLSSDESLFPKRSMGFEVRPVKAHNCRDVYATITGFRIGH 300

Query: 873 LTQAFN 890
           LT   N
Sbjct: 301 LTAVLN 306


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