BLASTX nr result
ID: Coptis24_contig00005451
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005451
(1206 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT76903.1| IAA type protein [Elaeis guineensis] 188 2e-50
ref|XP_002517529.1| Auxin-responsive protein IAA1, putative [Ric... 176 8e-48
emb|CBI36192.3| unnamed protein product [Vitis vinifera] 174 7e-47
ref|XP_002280524.2| PREDICTED: auxin-responsive protein IAA17-li... 174 7e-47
emb|CAN70529.1| hypothetical protein VITISV_010217 [Vitis vinifera] 174 7e-47
>gb|AAT76903.1| IAA type protein [Elaeis guineensis]
Length = 211
Score = 188 bits (478), Expect(2) = 2e-50
Identities = 100/155 (64%), Positives = 117/155 (75%), Gaps = 2/155 (1%)
Frame = -2
Query: 1124 ETELTLGLPGDTRIIHEGKSCAKRGFSQTVDLKLGCKEPTDDHSD--TDEVTSSVGKFPP 951
ETEL LGLPG +R ++ KRGF++TVDL LG + + D D T + S GK PP
Sbjct: 21 ETELKLGLPGGSRTAGS-ETEKKRGFAETVDLSLGAESRSGDLGDRSTGDFGSGAGK-PP 78
Query: 950 APKTQVVALGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEM 771
A K QVV GWPPVRS R+N K CTYVKVAVDGAPYLRKVDLEM+GGY Q L+A+E+M
Sbjct: 79 AVKAQVV--GWPPVRSFRKNA-LKSCTYVKVAVDGAPYLRKVDLEMYGGYQQFLTAIEDM 135
Query: 770 FTCFTIRNYVNESKLMDPVNGTEYVPTYEDKDGDW 666
F+CFT+RN NE +L+DPVNGTEYVPTYEDKDGDW
Sbjct: 136 FSCFTVRNCPNERRLVDPVNGTEYVPTYEDKDGDW 170
Score = 38.1 bits (87), Expect(2) = 2e-50
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -1
Query: 585 MFIESCKRLRLMKSSEAVGLA 523
MF+ SCKRLRLMKSSEA+ LA
Sbjct: 180 MFVASCKRLRLMKSSEAINLA 200
>ref|XP_002517529.1| Auxin-responsive protein IAA1, putative [Ricinus communis]
gi|223543161|gb|EEF44693.1| Auxin-responsive protein
IAA1, putative [Ricinus communis]
Length = 217
Score = 176 bits (447), Expect(2) = 8e-48
Identities = 95/158 (60%), Positives = 111/158 (70%), Gaps = 5/158 (3%)
Frame = -2
Query: 1124 ETELTLGLPGDTRIIHEG--KSCAKRGFSQTVDLKLGCKEPTDDHSDT---DEVTSSVGK 960
ETELTL LPG++R+ + K KRG+ QTVDL LG + D + SS K
Sbjct: 21 ETELTLALPGESRVSADNGAKIGTKRGYLQTVDLNLGSCSSDCGNKDCNMPENDVSSAPK 80
Query: 959 FPPAPKTQVVALGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSAL 780
PP K QVV GWPPVR+ R+N K +VKVAVDGAPYLRKVDLEM+ Y QLL+AL
Sbjct: 81 KPPVSKAQVV--GWPPVRAYRKNA-MKSSKFVKVAVDGAPYLRKVDLEMYNSYQQLLTAL 137
Query: 779 EEMFTCFTIRNYVNESKLMDPVNGTEYVPTYEDKDGDW 666
E+MF+CFTIRNY+NE K+MD VNG EYVPTYEDKDGDW
Sbjct: 138 EDMFSCFTIRNYLNERKIMDQVNGVEYVPTYEDKDGDW 175
Score = 41.6 bits (96), Expect(2) = 8e-48
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -1
Query: 585 MFIESCKRLRLMKSSEAVGLA 523
MF+ESCKRLRLMKSSEA GLA
Sbjct: 185 MFVESCKRLRLMKSSEATGLA 205
>emb|CBI36192.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 174 bits (442), Expect(2) = 7e-47
Identities = 93/153 (60%), Positives = 110/153 (71%)
Frame = -2
Query: 1124 ETELTLGLPGDTRIIHEGKSCAKRGFSQTVDLKLGCKEPTDDHSDTDEVTSSVGKFPPAP 945
+TELTLGLPG T KS KRGFS TV L L TD S+ E S PP
Sbjct: 105 DTELTLGLPGAT------KSGTKRGFSDTVGLNLRGPCNTDHASNPSENDVSGDSKPPPA 158
Query: 944 KTQVVALGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFT 765
KTQ+V GWPPV+++R+N+ K YVKVAVDGAPYLRKVDLEM+G Y QLL +LE+MF+
Sbjct: 159 KTQIV--GWPPVKASRKNVA-KISKYVKVAVDGAPYLRKVDLEMYGSYQQLLGSLEDMFS 215
Query: 764 CFTIRNYVNESKLMDPVNGTEYVPTYEDKDGDW 666
CF IRNY+NE KLMDPV G++Y+PTYED+DGDW
Sbjct: 216 CFPIRNYLNERKLMDPVKGSDYMPTYEDRDGDW 248
Score = 40.4 bits (93), Expect(2) = 7e-47
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -1
Query: 585 MFIESCKRLRLMKSSEAVGLA 523
MF+ESCKRLRLMKS EA+GLA
Sbjct: 258 MFVESCKRLRLMKSIEAIGLA 278
>ref|XP_002280524.2| PREDICTED: auxin-responsive protein IAA17-like [Vitis vinifera]
Length = 210
Score = 174 bits (442), Expect(2) = 7e-47
Identities = 93/153 (60%), Positives = 110/153 (71%)
Frame = -2
Query: 1124 ETELTLGLPGDTRIIHEGKSCAKRGFSQTVDLKLGCKEPTDDHSDTDEVTSSVGKFPPAP 945
+TELTLGLPG T KS KRGFS TV L L TD S+ E S PP
Sbjct: 21 DTELTLGLPGAT------KSGTKRGFSDTVGLNLRGPCNTDHASNPSENDVSGDSKPPPA 74
Query: 944 KTQVVALGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFT 765
KTQ+V GWPPV+++R+N+ K YVKVAVDGAPYLRKVDLEM+G Y QLL +LE+MF+
Sbjct: 75 KTQIV--GWPPVKASRKNVA-KISKYVKVAVDGAPYLRKVDLEMYGSYQQLLGSLEDMFS 131
Query: 764 CFTIRNYVNESKLMDPVNGTEYVPTYEDKDGDW 666
CF IRNY+NE KLMDPV G++Y+PTYED+DGDW
Sbjct: 132 CFPIRNYLNERKLMDPVKGSDYMPTYEDRDGDW 164
Score = 40.4 bits (93), Expect(2) = 7e-47
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -1
Query: 585 MFIESCKRLRLMKSSEAVGLA 523
MF+ESCKRLRLMKS EA+GLA
Sbjct: 174 MFVESCKRLRLMKSIEAIGLA 194
>emb|CAN70529.1| hypothetical protein VITISV_010217 [Vitis vinifera]
Length = 210
Score = 174 bits (442), Expect(2) = 7e-47
Identities = 93/153 (60%), Positives = 110/153 (71%)
Frame = -2
Query: 1124 ETELTLGLPGDTRIIHEGKSCAKRGFSQTVDLKLGCKEPTDDHSDTDEVTSSVGKFPPAP 945
+TELTLGLPG T KS KRGFS TV L L TD S+ E S PP
Sbjct: 21 DTELTLGLPGAT------KSGTKRGFSDTVXLNLRGPCNTDHASNPSENDVSGDSKPPPA 74
Query: 944 KTQVVALGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFT 765
KTQ+V GWPPV+++R+N+ K YVKVAVDGAPYLRKVDLEM+G Y QLL +LE+MF+
Sbjct: 75 KTQIV--GWPPVKASRKNVA-KISKYVKVAVDGAPYLRKVDLEMYGSYQQLLGSLEDMFS 131
Query: 764 CFTIRNYVNESKLMDPVNGTEYVPTYEDKDGDW 666
CF IRNY+NE KLMDPV G++Y+PTYED+DGDW
Sbjct: 132 CFPIRNYLNERKLMDPVKGSDYMPTYEDRDGDW 164
Score = 40.4 bits (93), Expect(2) = 7e-47
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -1
Query: 585 MFIESCKRLRLMKSSEAVGLA 523
MF+ESCKRLRLMKS EA+GLA
Sbjct: 174 MFVESCKRLRLMKSIEAIGLA 194