BLASTX nr result

ID: Coptis24_contig00005373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005373
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24025.3| unnamed protein product [Vitis vinifera]              243   3e-75
ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244...   243   6e-75
ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...   233   4e-72
ref|XP_002466851.1| hypothetical protein SORBIDRAFT_01g015210 [S...   233   7e-69
ref|XP_004150127.1| PREDICTED: uncharacterized protein LOC101221...   218   1e-66

>emb|CBI24025.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  243 bits (619), Expect(2) = 3e-75
 Identities = 118/177 (66%), Positives = 131/177 (74%)
 Frame = -1

Query: 912 HFQKHWINGQPIIVHDVLKLTSGLSWEPMVTCRALREKKNSRDLSRKMKTSNGLSHLEVI 733
           HFQ HW+ G+P+IV DVL+ TSGLSWEPMV  RA R+   ++            S L   
Sbjct: 457 HFQSHWMKGEPVIVSDVLEFTSGLSWEPMVMWRAFRKVSYTKS-----------SQLAEK 505

Query: 732 AIDCLRWCEVEINIFQIFKGYVDGMAHEDLWPMMLKLKDLPPSNFFEERLPCHGGEFISS 553
           AIDCL WCEVEINI Q FKGY +G AH +LWP MLKLKD PPSN F+ERLP HG EFISS
Sbjct: 506 AIDCLDWCEVEINIHQFFKGYSEGRAHRNLWPEMLKLKDWPPSNLFQERLPRHGAEFISS 565

Query: 552 LPFQEYTNPNYGYLNLAVKLPKASLKPDLGPKAYIAYGTAEELGRGDSVTKLHCDMS 382
           LP+ EYT+P  G LNLA KLP+ SLKPDLGPK YIAYG  EELGRGDSVTKLHCDMS
Sbjct: 566 LPYLEYTHPRSGLLNLAAKLPQKSLKPDLGPKTYIAYGVVEELGRGDSVTKLHCDMS 622



 Score = 66.6 bits (161), Expect(2) = 3e-75
 Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
 Frame = -2

Query: 317 VYVLMHTAEVNLMPQQVESIDRLKVKCHE-QDRKEHVGTTSEFSKVLTECLSPSNEKCLS 141
           V VLMHTAEV L  QQ+  I++LK KCH  QD+KE       F+ + TE    S++    
Sbjct: 625 VNVLMHTAEVTLSSQQLAVIEKLK-KCHAAQDQKEL------FAAIHTEQGEFSDDHM-- 675

Query: 140 ETVGTSSTSKTHCSQTAEGGALWDIFRRQDVTMLKEYLIKHSGEF 6
                +S +K        GGA+WDIFRRQDV  L+EYL KH  EF
Sbjct: 676 -----ASGNKLVGFDKEGGGAVWDIFRRQDVPKLQEYLRKHHREF 715


>ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244450 [Vitis vinifera]
          Length = 896

 Score =  243 bits (619), Expect(2) = 6e-75
 Identities = 118/177 (66%), Positives = 131/177 (74%)
 Frame = -1

Query: 912 HFQKHWINGQPIIVHDVLKLTSGLSWEPMVTCRALREKKNSRDLSRKMKTSNGLSHLEVI 733
           HFQ HW+ G+P+IV DVL+ TSGLSWEPMV  RA R+   ++            S L   
Sbjct: 495 HFQSHWMKGEPVIVSDVLEFTSGLSWEPMVMWRAFRKVSYTKS-----------SQLAEK 543

Query: 732 AIDCLRWCEVEINIFQIFKGYVDGMAHEDLWPMMLKLKDLPPSNFFEERLPCHGGEFISS 553
           AIDCL WCEVEINI Q FKGY +G AH +LWP MLKLKD PPSN F+ERLP HG EFISS
Sbjct: 544 AIDCLDWCEVEINIHQFFKGYSEGRAHRNLWPEMLKLKDWPPSNLFQERLPRHGAEFISS 603

Query: 552 LPFQEYTNPNYGYLNLAVKLPKASLKPDLGPKAYIAYGTAEELGRGDSVTKLHCDMS 382
           LP+ EYT+P  G LNLA KLP+ SLKPDLGPK YIAYG  EELGRGDSVTKLHCDMS
Sbjct: 604 LPYLEYTHPRSGLLNLAAKLPQKSLKPDLGPKTYIAYGVVEELGRGDSVTKLHCDMS 660



 Score = 65.5 bits (158), Expect(2) = 6e-75
 Identities = 43/104 (41%), Positives = 56/104 (53%)
 Frame = -2

Query: 317 VYVLMHTAEVNLMPQQVESIDRLKVKCHEQDRKEHVGTTSEFSKVLTECLSPSNEKCLSE 138
           V VLMHTAEV L  QQ+  I++LK KCH    ++ +    EFS    + ++  N+    +
Sbjct: 663 VNVLMHTAEVTLSSQQLAVIEKLK-KCHAAQDQKELFAQGEFSD---DHMASGNKLVGFD 718

Query: 137 TVGTSSTSKTHCSQTAEGGALWDIFRRQDVTMLKEYLIKHSGEF 6
             G              GGA+WDIFRRQDV  L+EYL KH  EF
Sbjct: 719 KEG--------------GGAVWDIFRRQDVPKLQEYLRKHHREF 748


>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score =  233 bits (594), Expect(2) = 4e-72
 Identities = 114/177 (64%), Positives = 129/177 (72%)
 Frame = -1

Query: 912  HFQKHWINGQPIIVHDVLKLTSGLSWEPMVTCRALREKKNSRDLSRKMKTSNGLSHLEVI 733
            HFQ HW+ G+PIIV DVL+ TSGLSWEPMV  RA R+  N+          N   HLEV 
Sbjct: 817  HFQWHWLRGEPIIVRDVLENTSGLSWEPMVMWRAFRQITNT----------NHAQHLEVT 866

Query: 732  AIDCLRWCEVEINIFQIFKGYVDGMAHEDLWPMMLKLKDLPPSNFFEERLPCHGGEFISS 553
            A+DCL WCEV +NI Q FKGY DG      WP +LKLKD PPS  F+ERLP H  EF+S 
Sbjct: 867  AMDCLDWCEVAVNIHQFFKGYSDGRFDSYKWPQILKLKDWPPSTLFKERLPRHHAEFVSC 926

Query: 552  LPFQEYTNPNYGYLNLAVKLPKASLKPDLGPKAYIAYGTAEELGRGDSVTKLHCDMS 382
            LPF++YT+P  G LNLAVKLPK SL+PDLGPK YIAYG A+ELGRGDSVTKLHCDMS
Sbjct: 927  LPFKDYTHPFDGILNLAVKLPKGSLQPDLGPKTYIAYGVAQELGRGDSVTKLHCDMS 983



 Score = 65.5 bits (158), Expect(2) = 4e-72
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = -2

Query: 317  VYVLMHTAEVNLMPQQVESIDRLKVKCHEQDRKEHVGTTSEFSKVLTECLSPSNEKCLSE 138
            V VL HTAE  L    +  I++LK +   QD++EH          L + +     K +S 
Sbjct: 986  VNVLTHTAEATLPSDNLAEIEKLKAQHSAQDQEEH----------LEDKVGQDGSKKIS- 1034

Query: 137  TVGTSSTSKTHCS--QTAEGGALWDIFRRQDVTMLKEYLIKHSGEF 6
              G S+ S    +  + AEGGALWDIFRRQDV  L+EYL KH  +F
Sbjct: 1035 --GPSAISGNRLAGGKPAEGGALWDIFRRQDVPKLQEYLKKHFRQF 1078


>ref|XP_002466851.1| hypothetical protein SORBIDRAFT_01g015210 [Sorghum bicolor]
           gi|241920705|gb|EER93849.1| hypothetical protein
           SORBIDRAFT_01g015210 [Sorghum bicolor]
          Length = 990

 Score =  233 bits (595), Expect(2) = 7e-69
 Identities = 116/178 (65%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
 Frame = -1

Query: 912 HFQKHWINGQPIIVHDVLKLTSGLSWEPMVTCRALREKKNSRDLSRKMKTSNGLSHLEVI 733
           HFQ HW  G+P+IV DVL+LTSGLSWEP+V  RALREKK + D+  +        H  V 
Sbjct: 482 HFQMHWTKGEPVIVSDVLQLTSGLSWEPLVMWRALREKKTNGDVEDE--------HFAVR 533

Query: 732 AIDCLRWCEVEINIFQIFKGYVDGMAHEDL-WPMMLKLKDLPPSNFFEERLPCHGGEFIS 556
           AIDCL W EVEINI   F GY+ G  H  + WP MLKLKD PPS+ F++RLP HG EFIS
Sbjct: 534 AIDCLDWNEVEINIHMFFMGYMKGRMHTTVHWPEMLKLKDWPPSSSFDQRLPRHGAEFIS 593

Query: 555 SLPFQEYTNPNYGYLNLAVKLPKASLKPDLGPKAYIAYGTAEELGRGDSVTKLHCDMS 382
           +LPF EYT+P YG LNLAVKLP  +LKPDLGPK YIAYG  +ELGRGDSVTKLHCDMS
Sbjct: 594 ALPFPEYTDPRYGPLNLAVKLPDGALKPDLGPKTYIAYGFHQELGRGDSVTKLHCDMS 651



 Score = 54.3 bits (129), Expect(2) = 7e-69
 Identities = 40/130 (30%), Positives = 55/130 (42%), Gaps = 26/130 (20%)
 Frame = -2

Query: 317  VYVLMHTAEVNLMPQQVESIDRLKVKCHEQDRKEHVGTT-SEFSKVLTECLSPSNEKCLS 141
            V +L HT +V     Q + I++L+ K  EQD +E  G   S   + L    + S    + 
Sbjct: 654  VNILTHTTQVTYEGYQHKKIEKLRKKMKEQDLQELYGVLESGTERDLLSSSTDSRNLTID 713

Query: 140  ETVGTSSTSKTHCSQTAE-------------------------GGALWDIFRRQDVTMLK 36
            ET   S      CS   +                         GGALWDIFRR+D   L+
Sbjct: 714  ETSKISCKDAGQCSDYIDKNNSYAGMHNGAQCITGKSGDHEKTGGALWDIFRREDSDKLQ 773

Query: 35   EYLIKHSGEF 6
            +YL KH+ EF
Sbjct: 774  DYLRKHAKEF 783


>ref|XP_004150127.1| PREDICTED: uncharacterized protein LOC101221956 [Cucumis sativus]
          Length = 955

 Score =  218 bits (556), Expect(2) = 1e-66
 Identities = 107/177 (60%), Positives = 128/177 (72%)
 Frame = -1

Query: 912  HFQKHWINGQPIIVHDVLKLTSGLSWEPMVTCRALREKKNSRDLSRKMKTSNGLSHLEVI 733
            HFQ HW  G+P++V +VL+ TSGLSWEP+V  RA R+  +         T +G   LEV 
Sbjct: 541  HFQWHWSKGEPVVVSNVLETTSGLSWEPLVMWRAFRQITH---------TKHG-QQLEVK 590

Query: 732  AIDCLRWCEVEINIFQIFKGYVDGMAHEDLWPMMLKLKDLPPSNFFEERLPCHGGEFISS 553
            AIDCL WCE+++NI + F GY +G     LWP +LKLKD PPSN FE+ LP H  EFIS 
Sbjct: 591  AIDCLDWCELDVNIHKFFIGYTNGQFDAKLWPRILKLKDWPPSNHFEKCLPRHNAEFISC 650

Query: 552  LPFQEYTNPNYGYLNLAVKLPKASLKPDLGPKAYIAYGTAEELGRGDSVTKLHCDMS 382
            LPF+EYT+P+ G LNLAVKLP  SLKPD+GPK YIAYG  +ELGRGDSVTKLHCDMS
Sbjct: 651  LPFKEYTHPSKGNLNLAVKLPAESLKPDMGPKTYIAYGVTQELGRGDSVTKLHCDMS 707



 Score = 62.0 bits (149), Expect(2) = 1e-66
 Identities = 43/104 (41%), Positives = 55/104 (52%)
 Frame = -2

Query: 317 VYVLMHTAEVNLMPQQVESIDRLKVKCHEQDRKEHVGTTSEFSKVLTECLSPSNEKCLSE 138
           V VL H   V L P+ + SI  LK K   QD++E       +   L E    S+E+ +SE
Sbjct: 710 VNVLTHVTNVTLKPEHLHSIKELKAKHLAQDQEEI------YEIDLAE--GTSSEEKISE 761

Query: 137 TVGTSSTSKTHCSQTAEGGALWDIFRRQDVTMLKEYLIKHSGEF 6
            + +   S        +GGALWDIFRRQDV  L+EYL KH  EF
Sbjct: 762 EMESWEAS--------DGGALWDIFRRQDVPQLQEYLNKHFREF 797


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