BLASTX nr result

ID: Coptis24_contig00005369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005369
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|2...   244   9e-63
gb|AAO42272.1| unknown protein [Arabidopsis thaliana]                 239   2e-61
ref|NP_001184967.1| O-Glycosyl hydrolases family 17 protein [Ara...   239   2e-61
ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|2...   239   3e-61
ref|XP_003529639.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   238   7e-61

>ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|222859606|gb|EEE97153.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  244 bits (622), Expect = 9e-63
 Identities = 115/168 (68%), Positives = 136/168 (80%), Gaps = 10/168 (5%)
 Frame = +1

Query: 1   FYGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQ 180
           FY N TPVYLLHVSGSG+FLA DTTNQTYC+ MDGVDSK+LQAALDWACGPG++NCSEIQ
Sbjct: 298 FYANATPVYLLHVSGSGTFLANDTTNQTYCIVMDGVDSKTLQAALDWACGPGQANCSEIQ 357

Query: 181 PGEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQI 360
           PGE+CYQPNNVKNHASYAFDSYYQK+GR+A SCDFKGVAMITTTDPSHG+CIFPGSKK  
Sbjct: 358 PGENCYQPNNVKNHASYAFDSYYQKEGRAAGSCDFKGVAMITTTDPSHGSCIFPGSKKIT 417

Query: 361 NKTKIGSPSTNSTSNAQSG----------LSGRTQGFKAFIILLMTLI 474
           NKT+    +T + SNA  G          +S   +  +AF+ ++ +++
Sbjct: 418 NKTRT-VVNTTTPSNAAGGSRLISFRSSRISAMDKALQAFLTIIFSIL 464


>gb|AAO42272.1| unknown protein [Arabidopsis thaliana]
          Length = 332

 Score =  239 bits (611), Expect = 2e-61
 Identities = 114/159 (71%), Positives = 132/159 (83%)
 Frame = +1

Query: 1   FYGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQ 180
           FYGN TPVYLLHVSGSG+FLA DTTNQTYC+AMDGVD+K+LQAALDWACGPGRSNCSEIQ
Sbjct: 174 FYGNSTPVYLLHVSGSGTFLANDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQ 233

Query: 181 PGEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQI 360
           PGE CYQPNNVK HAS+AF+SYYQK+GR++ SCDFKGVAMITTTDPSHG+CIFPGSKK  
Sbjct: 234 PGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVG 293

Query: 361 NKTKIGSPSTNSTSNAQSGLSGRTQGFKAFIILLMTLIT 477
           N+T+      NST  A    + R+   + F + +M L+T
Sbjct: 294 NRTQ---TVVNSTEVAAGEATSRSLS-RGFCVTIMILVT 328


>ref|NP_001184967.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana]
           gi|357529541|sp|O65399.3|E131_ARATH RecName: Full=Glucan
           endo-1,3-beta-glucosidase 1; AltName:
           Full=(1->3)-beta-glucan endohydrolase 1;
           Short=(1->3)-beta-glucanase 1; AltName:
           Full=Beta-1,3-endoglucanase 1; Short=Beta-1,3-glucanase
           1; Flags: Precursor gi|332190670|gb|AEE28791.1|
           O-Glycosyl hydrolases family 17 protein [Arabidopsis
           thaliana]
          Length = 511

 Score =  239 bits (611), Expect = 2e-61
 Identities = 114/159 (71%), Positives = 132/159 (83%)
 Frame = +1

Query: 1   FYGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQ 180
           FYGN TPVYLLHVSGSG+FLA DTTNQTYC+AMDGVD+K+LQAALDWACGPGRSNCSEIQ
Sbjct: 353 FYGNSTPVYLLHVSGSGTFLANDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQ 412

Query: 181 PGEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQI 360
           PGE CYQPNNVK HAS+AF+SYYQK+GR++ SCDFKGVAMITTTDPSHG+CIFPGSKK  
Sbjct: 413 PGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVG 472

Query: 361 NKTKIGSPSTNSTSNAQSGLSGRTQGFKAFIILLMTLIT 477
           N+T+      NST  A    + R+   + F + +M L+T
Sbjct: 473 NRTQ---TVVNSTEVAAGEATSRSLS-RGFCVTIMILVT 507


>ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|222832811|gb|EEE71288.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  239 bits (609), Expect = 3e-61
 Identities = 115/162 (70%), Positives = 131/162 (80%), Gaps = 3/162 (1%)
 Frame = +1

Query: 1   FYGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQ 180
           FY N TPVYLLHVSGSG+FLA DTTNQTYC+ MDGVDSK+LQAALDW CGPGR+NCSEIQ
Sbjct: 298 FYANSTPVYLLHVSGSGTFLANDTTNQTYCIVMDGVDSKTLQAALDWVCGPGRANCSEIQ 357

Query: 181 PGEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQI 360
           PGE+CYQPNNVKNHASYAFDSYYQK+GR++ SCDFKG+AM TTTDPSHG+CIFPGSKK  
Sbjct: 358 PGENCYQPNNVKNHASYAFDSYYQKEGRASGSCDFKGIAMTTTTDPSHGSCIFPGSKKIT 417

Query: 361 NKTKIGSPSTNSTSNAQSG---LSGRTQGFKAFIILLMTLIT 477
           NK +    +TN  SNA  G   +S ++    A    L TL+T
Sbjct: 418 NKARTVVNTTN-PSNAAGGSRLISFKSSRMSAVDKALQTLLT 458


>ref|XP_003529639.1| PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Glycine max]
          Length = 523

 Score =  238 bits (606), Expect = 7e-61
 Identities = 112/152 (73%), Positives = 126/152 (82%)
 Frame = +1

Query: 1   FYGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQ 180
           FYGN TP YLLHVSG G+FLA DTTNQTYC+AMDG DSK+LQAALDWACGPGR+NCSEIQ
Sbjct: 352 FYGNTTPAYLLHVSGIGTFLANDTTNQTYCIAMDGFDSKTLQAALDWACGPGRANCSEIQ 411

Query: 181 PGEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQI 360
           PGE C+QPNNVKNHASYAFDSYYQK+G++  SCDFKGVAMITTTDPSHG+CIFPGSKK  
Sbjct: 412 PGESCFQPNNVKNHASYAFDSYYQKEGKAQGSCDFKGVAMITTTDPSHGSCIFPGSKKVS 471

Query: 361 NKTKIGSPSTNSTSNAQSGLSGRTQGFKAFII 456
           NKTK      NST ++ +G   R + F +  I
Sbjct: 472 NKTK---EVVNSTISSNAGEKLRFKTFNSIKI 500


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