BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005350
         (3526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24290.3| unnamed protein product [Vitis vinifera]             1116   0.0  
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li...  1111   0.0  
ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-li...  1091   0.0  
ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-li...  1081   0.0  
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li...  1041   0.0  

>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score = 1116 bits (2886), Expect = 0.0
 Identities = 586/786 (74%), Positives = 649/786 (82%), Gaps = 4/786 (0%)
 Frame = -1

Query: 2728 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLIKRHGGRVTGSV 2549
            FMNFGERKDPPHKGEKEVPEGA DCLAGLTFV++GTLDSLEREEAE LIKRHGGRVTGSV
Sbjct: 158  FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217

Query: 2548 SKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPPADTKTKTVEKA 2369
            SKKTN+LL DEDIGG KS KAKELGT FL EDGLFD+I  S   K  P      K+++K 
Sbjct: 218  SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKA-PARGEPKKSLDKV 276

Query: 2368 AASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKG--EALGRGGSLTWTEKYKPKVPND 2195
              + PK SP K+E K  + V+  G  +  +   PK   + +G   SLTWTEKYKPKVPND
Sbjct: 277  VLATPKKSPQKVEKKVDQVVNSSGKRTVLAATTPKHIYQTIGHA-SLTWTEKYKPKVPND 335

Query: 2194 IIGNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGIGKSTSAKLI 2015
            IIGNQSLVKQLH+WL  WNE FL+ G KGKGKKQNDS  KKAVLLSGTPGIGK+TSAKL+
Sbjct: 336  IIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKLV 395

Query: 2014 SQMLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDRSKHPKSVLI 1835
            SQMLGFQAIEVNASD+RGKA++KI KGIGGS ANS+KELVSNE+L  +MDRSKHPK+VLI
Sbjct: 396  SQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKTVLI 455

Query: 1834 MDEVDGMSAGDRGGVVDLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSYRKPTKQQ 1655
            MDEVDGMSAGDRGGV DL              CNDRYSQKLKSLVNYCLLLS+RKPTKQQ
Sbjct: 456  MDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQ 515

Query: 1654 MAKRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKYDDMRQRLLS 1475
            MAKRL+QVANAEGLQVNEIALEELAERVNGDMRMA+NQL YMSLS SVIKYDD+RQRLLS
Sbjct: 516  MAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVRQRLLS 575

Query: 1474 SSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNYRPSSAGKDD 1295
            S+KDEDISPF AVDKLFG+NGGKLRMDERIDLSMSD DLVPLLIQENY+NYRP+ AGKDD
Sbjct: 576  SAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTLAGKDD 635

Query: 1294 SGVKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLHGQRETLEQG 1115
            +GVKRM+L+ARAAESIG GDI NVQIRRYRQWQLS AGS  SCI PAALLHGQRETLEQG
Sbjct: 636  NGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAALLHGQRETLEQG 695

Query: 1114 ERNFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSLILKQLIDPL 935
            ERNFNRFGGWLGKNSTMGKN RLLED+HVHLLASRE  S R T+R+DYL+LILK+L DPL
Sbjct: 696  ERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYLTLILKRLTDPL 755

Query: 934  RVLPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKAALTKAYKQG 755
            R+LPKD+AVQKVVEFMD YSISQEDFDTIVELSKFQGH +PL+GIQPAVK+ALTKAY +G
Sbjct: 756  RMLPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAVKSALTKAYNKG 815

Query: 754  SNLRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXXXXXXXXDGI 575
            S+ R+VRAAD+IT+PGIKKAPKKRIAA+LEPVD+ LA ENGD LAE+             
Sbjct: 816  SSSRLVRAADLITLPGIKKAPKKRIAAILEPVDDELARENGDALAESEEENSSDTDDMDT 875

Query: 574  DNVERKPQLDLQSSSSKGIQVQLDLKNNGXXXXXXXXXXXXXXXSE-SVEKKGGRGSGTA 398
             N ++K  +DLQ+ +SKGI+V+LDLK  G                  S EKKGGRGSG A
Sbjct: 876  ANGDKKLPVDLQNLNSKGIKVELDLKGAGSSSAKKTPAGRGRGGGSASTEKKGGRGSGAA 935

Query: 397  -SKRKR 383
             +KRKR
Sbjct: 936  GAKRKR 941



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 43/104 (41%), Positives = 55/104 (52%), Gaps = 19/104 (18%)
 Frame = -1

Query: 3253 SDIRKWFMKQHDKNNNATKTDPPPEKNVS-------------------QDSSSRRKTSKY 3131
            SDIRKWFMK+HD +N        PE   S                   Q+SS RRKTSKY
Sbjct: 6    SDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65

Query: 3130 FANDGKKVKDEMEAEKTPVKRKTQKSSEQVHDDVKPPLAKKLHK 2999
            F    +K KDE E E+ P KRKTQK ++   + + PP +KK+ +
Sbjct: 66   F----QKPKDEKEMEELPAKRKTQKGTK---ESLNPPPSKKIRR 102


>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
          Length = 933

 Score = 1111 bits (2873), Expect = 0.0
 Identities = 585/784 (74%), Positives = 646/784 (82%), Gaps = 2/784 (0%)
 Frame = -1

Query: 2728 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLIKRHGGRVTGSV 2549
            FMNFGERKDPPHKGEKEVPEGA DCLAGLTFV++GTLDSLEREEAE LIKRHGGRVTGSV
Sbjct: 158  FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217

Query: 2548 SKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPPADTKTKTVEKA 2369
            SKKTN+LL DEDIGG KS KAKELGT FL EDGLFD+I  S   K  P      K+++K 
Sbjct: 218  SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKA-PARGEPKKSLDKV 276

Query: 2368 AASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKGEALGRGGSLTWTEKYKPKVPNDII 2189
              + PK SP K+E K  + V        A+  K   + +G   SLTWTEKYKPKVPNDII
Sbjct: 277  VLATPKKSPQKVEKKGKRTV------LAATTPKHIYQTIGHA-SLTWTEKYKPKVPNDII 329

Query: 2188 GNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGIGKSTSAKLISQ 2009
            GNQSLVKQLH+WL  WNE FL+ G KGKGKKQNDS  KKAVLLSGTPGIGK+TSAKL+SQ
Sbjct: 330  GNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKLVSQ 389

Query: 2008 MLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDRSKHPKSVLIMD 1829
            MLGFQAIEVNASD+RGKA++KI KGIGGS ANS+KELVSNE+L  +MDRSKHPK+VLIMD
Sbjct: 390  MLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKTVLIMD 449

Query: 1828 EVDGMSAGDRGGVVDLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSYRKPTKQQMA 1649
            EVDGMSAGDRGGV DL              CNDRYSQKLKSLVNYCLLLS+RKPTKQQMA
Sbjct: 450  EVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMA 509

Query: 1648 KRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKYDDMRQRLLSSS 1469
            KRL+QVANAEGLQVNEIALEELAERVNGDMRMA+NQL YMSLS SVIKYDD+RQRLLSS+
Sbjct: 510  KRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVRQRLLSSA 569

Query: 1468 KDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNYRPSSAGKDDSG 1289
            KDEDISPF AVDKLFG+NGGKLRMDERIDLSMSD DLVPLLIQENY+NYRP+ AGKDD+G
Sbjct: 570  KDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTLAGKDDNG 629

Query: 1288 VKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLHGQRETLEQGER 1109
            VKRM+L+ARAAESIG GDI NVQIRRYRQWQLS AGS  SCI PAALLHGQRETLEQGER
Sbjct: 630  VKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAALLHGQRETLEQGER 689

Query: 1108 NFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSLILKQLIDPLRV 929
            NFNRFGGWLGKNSTMGKN RLLED+HVHLLASRE  S R T+R+DYL+LILK+L DPLR+
Sbjct: 690  NFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYLTLILKRLTDPLRM 749

Query: 928  LPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKAALTKAYKQGSN 749
            LPKD+AVQKVVEFMD YSISQEDFDTIVELSKFQGH +PL+GIQPAVK+ALTKAY +GS+
Sbjct: 750  LPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAVKSALTKAYNKGSS 809

Query: 748  LRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXXXXXXXXDGIDN 569
             R+VRAAD+IT+PGIKKAPKKRIAA+LEPVD+ LA ENGD LAE+              N
Sbjct: 810  SRLVRAADLITLPGIKKAPKKRIAAILEPVDDELARENGDALAESEEENSSDTDDMDTAN 869

Query: 568  VERKPQLDLQSSSSKGIQVQLDLKNNGXXXXXXXXXXXXXXXSE-SVEKKGGRGSGTA-S 395
             ++K  +DLQ+ +SKGI+V+LDLK  G                  S EKKGGRGSG A +
Sbjct: 870  GDKKLPVDLQNLNSKGIKVELDLKGAGSSSAKKTPAGRGRGGGSASTEKKGGRGSGAAGA 929

Query: 394  KRKR 383
            KRKR
Sbjct: 930  KRKR 933



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 43/104 (41%), Positives = 55/104 (52%), Gaps = 19/104 (18%)
 Frame = -1

Query: 3253 SDIRKWFMKQHDKNNNATKTDPPPEKNVS-------------------QDSSSRRKTSKY 3131
            SDIRKWFMK+HD +N        PE   S                   Q+SS RRKTSKY
Sbjct: 6    SDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65

Query: 3130 FANDGKKVKDEMEAEKTPVKRKTQKSSEQVHDDVKPPLAKKLHK 2999
            F    +K KDE E E+ P KRKTQK ++   + + PP +KK+ +
Sbjct: 66   F----QKPKDEKEMEELPAKRKTQKGTK---ESLNPPPSKKIRR 102


>ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
          Length = 947

 Score = 1091 bits (2822), Expect = 0.0
 Identities = 603/975 (61%), Positives = 684/975 (70%), Gaps = 14/975 (1%)
 Frame = -1

Query: 3256 MSDIRKWFMKQHDKNNNATKTDPPPEKNVS-----------QDSSSRRKTSKYFANDGKK 3110
            MSDIRKWFMK HDK NNA  + P  +K  S           Q+SS RR TSKYF ++ +K
Sbjct: 1    MSDIRKWFMKTHDKGNNAASSKPSSDKPQSEKTVAFAVAGGQESSGRRITSKYFNSNKQK 60

Query: 3109 VKDEMEAEKTPVKRKTQKSSEQVHDDVKPPLAKKLHKGXXXXXXXXDFVMPSASKKSVEV 2930
             KDE E ++ P KRK  K SE++H+D                    D V+P+  KK  + 
Sbjct: 61   GKDEKEKQELPAKRKNAKDSEEIHED-----------------DGDDSVLPTNKKKLADT 103

Query: 2929 TPAXXXXXXXXXXXXXXXVDMQENXXXXXXDEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 2750
            TP                  ++E+      D V                           
Sbjct: 104  TPTKKLKSGSGRGIPKKSAVLEESDEDDDKDAVSAAKSAGRGGGGGGRGAPGRSTGGRGR 163

Query: 2749 XXXXXXGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLIKRHG 2570
                   FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFV++GTLDSLEREEAE LIKRHG
Sbjct: 164  GGGRGG-FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHG 222

Query: 2569 GRVTGSVSKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPPADTK 2390
            GRVTGSVSKKTNYLL DEDIGGRKSEKAKELGT+FL EDGLFD+IR SKP K     D K
Sbjct: 223  GRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKASSQEDKK 282

Query: 2389 TKTVEKAAASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKGEALGRGGSLTWTEKYKP 2210
                  A ASQ K SP     K   K  P    S +  AKPK     +  S+ WTEKY+P
Sbjct: 283  LVNKAVAVASQSKVSP-----KSQVKGKPLSSRSPSKQAKPKTATTVQSSSM-WTEKYRP 336

Query: 2209 KVPNDIIGNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGIGKST 2030
            K P DIIGNQSLV QL +WL  WNE FL+ G K +GKKQNDS  KKAVLLSGTPGIGK+T
Sbjct: 337  KDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTPGIGKTT 396

Query: 2029 SAKLISQMLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDRSKHP 1850
            SAKL+ Q LGFQAIEVNASDSRGKADSKI KGI GS  NSVKELV+NE++ VNM+RSKH 
Sbjct: 397  SAKLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGVNMERSKHY 456

Query: 1849 KSVLIMDEVDGMSAGDRGGVVDLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSYRK 1670
            KSVLIMDEVDGMSAGDRGGV DL              CNDRYSQKLKSLVNYCLLLS+RK
Sbjct: 457  KSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRK 516

Query: 1669 PTKQQMAKRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKYDDMR 1490
            PTKQQMAKRLM V+ AE LQVNEIALEELAERVNGDMRMA+NQL YMSLS SVI YDD+R
Sbjct: 517  PTKQQMAKRLMDVSKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDIR 576

Query: 1489 QRLLSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNYRPSS 1310
            QR L+++KDEDISPFTAVDKLFG+N GKL+MDERI+LSMSD DLVPL+IQENY+NYRPS 
Sbjct: 577  QRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYINYRPSL 636

Query: 1309 AGKDDSGVKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLHGQRE 1130
            AGKDDSG+KRMNLIARAAESI  GDI NVQIRRYRQWQLS   SL + IIPA+LLHGQRE
Sbjct: 637  AGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSLATSIIPASLLHGQRE 696

Query: 1129 TLEQGERNFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSLILKQ 950
             LEQGERNFNRFGGWLGKNSTMGKN RLL+D+HVH+LASRE  S R T+R++YL+L+LK+
Sbjct: 697  ILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTLLLKE 756

Query: 949  LIDPLRVLPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKAALTK 770
            + +PLR LPK EAVQ+VVE M+ YSISQEDFDTIVELSKF+GH NPLDGIQPAVK+ALTK
Sbjct: 757  MTEPLRTLPKAEAVQQVVELMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAVKSALTK 816

Query: 769  AYKQGSNLRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXXXXXX 590
            AYK+ S+ RVVR AD+IT+PG+KK PKKRIAA+LEP  E + +  GD L E+        
Sbjct: 817  AYKEQSSSRVVRVADLITLPGVKKVPKKRIAAILEPAGEEVEKGEGDTLDESEEENSSDN 876

Query: 589  XXDG---IDNVERKPQLDLQSSSSKGIQVQLDLKNNGXXXXXXXXXXXXXXXSESVEKKG 419
               G         K Q +LQS +SK  Q+QL+LK  G               S S +  G
Sbjct: 877  EELGKLCEGTKGEKLQSELQSYNSKATQIQLELKGTG--------------NSSSKKTSG 922

Query: 418  GRGSGTASKRKR*VQ 374
            GRG G ++  K+  Q
Sbjct: 923  GRGKGASASGKKVAQ 937


>ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
          Length = 1112

 Score = 1081 bits (2796), Expect = 0.0
 Identities = 600/976 (61%), Positives = 682/976 (69%), Gaps = 13/976 (1%)
 Frame = -1

Query: 3262 FNMSDIRKWFMKQHDKNNNATKTDPP-----------PEKNVS--QDSSSRRKTSKYFAN 3122
            F  SDIRKWFMK HDK NNA  + P             EK V+  Q+SS RR TSKYF +
Sbjct: 160  FVASDIRKWFMKTHDKGNNAASSKPSNQPKPSSDKPQSEKTVAGGQESSGRRITSKYFNS 219

Query: 3121 DGKKVKDEMEAEKTPVKRKTQKSSEQVHDDVKPPLAKKLHKGXXXXXXXXDFVMPSASKK 2942
            + +K KD+ E ++ P KRK  K SE++      P  KK+H+           V+P+  KK
Sbjct: 220  NKQKGKDKKEMQELPAKRKNMKDSEEI------PEPKKIHEDDGDDS-----VLPTNKKK 268

Query: 2941 SVEVTPAXXXXXXXXXXXXXXXVDMQENXXXXXXDEVXXXXXXXXXXXXXXXXXXXXXXX 2762
              + TP                  ++E+      D V                       
Sbjct: 269  LADTTPTKKLKSGSGRGLPQKSAVLEESDEDDDKDAVSAAKSAGRGDGGRGAPGRSTSGR 328

Query: 2761 XXXXXXXXXXGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLI 2582
                       FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFV++GTLDSLEREEAE LI
Sbjct: 329  GRGGGRGG---FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLI 385

Query: 2581 KRHGGRVTGSVSKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPP 2402
            KRHGGRVTGSVSKKTNYLL DEDIGGRKSEKAK+LGT+FL EDGLFD+IR SKP K    
Sbjct: 386  KRHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKQLGTSFLTEDGLFDMIRGSKPAKAPSQ 445

Query: 2401 ADTKTKTVEKAAASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKGEALGRGGSLTWTE 2222
             D K      A ASQ K SP      ++    P    S ++ AKPK  A     SL WTE
Sbjct: 446  EDKKPVNKAVAVASQSKVSP----KSQSTNAVPLSSRSPSNQAKPK-TATTVQSSLMWTE 500

Query: 2221 KYKPKVPNDIIGNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGI 2042
            KY+PK P DIIGNQSLV QL +WL  WNE FL+ G K +GKKQNDS  KKAVLLSGTPGI
Sbjct: 501  KYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTPGI 560

Query: 2041 GKSTSAKLISQMLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDR 1862
            GK+TSA L+ Q LGFQAIEVNASDSRGKADSKI KGI GS  NSVKELV+NE++ +NM R
Sbjct: 561  GKTTSATLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGINMGR 620

Query: 1861 SKHPKSVLIMDEVDGMSAGDRGGVVDLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLL 1682
            SKH KSVLIMDEVDGMSAGDRGGV DL              CNDRYSQKLKSLVNYCLLL
Sbjct: 621  SKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLL 680

Query: 1681 SYRKPTKQQMAKRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKY 1502
            S+RKPTKQQMAKRLM VA AE LQVNEIALEELAERVNGDMRMA+NQL YMSLS S+I Y
Sbjct: 681  SFRKPTKQQMAKRLMDVAKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSIINY 740

Query: 1501 DDMRQRLLSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNY 1322
            DD+RQR L+++KDEDISPFTAVDKLFG+N GKL+MDERI+LSMSD DLVPL+IQENY+NY
Sbjct: 741  DDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYINY 800

Query: 1321 RPSSAGKDDSGVKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLH 1142
            RPS AGKDDSG+KRMNLIARAAESI  GDI NVQIRRYRQWQLS   S+ + IIPA+LLH
Sbjct: 801  RPSMAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSVATSIIPASLLH 860

Query: 1141 GQRETLEQGERNFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSL 962
            GQRE LEQGERNFNRFGGWLGKNSTMGKN RLL+D+HVH+LASRE  S R T+R++YL+L
Sbjct: 861  GQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTL 920

Query: 961  ILKQLIDPLRVLPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKA 782
            +LKQ+ + LR LPK EAVQ+VVEFM+ YSISQEDFDTIVELSKF+GH NPLDGIQPAVK+
Sbjct: 921  LLKQMTETLRTLPKAEAVQQVVEFMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAVKS 980

Query: 781  ALTKAYKQGSNLRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXX 602
            ALTK YK+ S  RVVR AD+IT+PG+KK PKKRIAA+LEP  E + +  GD L E+    
Sbjct: 981  ALTKEYKEQSTSRVVRVADLITLPGVKKVPKKRIAAILEPAGEEVEKGEGDALDESEEEN 1040

Query: 601  XXXXXXDGIDNVERKPQLDLQSSSSKGIQVQLDLKNNGXXXXXXXXXXXXXXXSESVEKK 422
                          K Q +LQS +SK  QVQL+LK  G               S S +  
Sbjct: 1041 SSDTEELEGTTKGEKLQSELQSLNSKATQVQLELKGTG--------------NSSSKKTS 1086

Query: 421  GGRGSGTASKRKR*VQ 374
            GGRG G +   K+  Q
Sbjct: 1087 GGRGKGVSVSGKKVAQ 1102


>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 981

 Score = 1041 bits (2693), Expect = 0.0
 Identities = 550/796 (69%), Positives = 627/796 (78%), Gaps = 14/796 (1%)
 Frame = -1

Query: 2728 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVMTGTLDSLEREEAEVLIKRHGGRVTGSV 2549
            FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFV++GTLDSLEREEAE LIKRHGGRVTGSV
Sbjct: 194  FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 253

Query: 2548 SKKTNYLLVDEDIGGRKSEKAKELGTTFLNEDGLFDIIRKSKPTKTIPPADTKTKTVEKA 2369
            SKKTNYLL DEDIGGRKS KAKELGT FL EDGLFD+IR S   K  PP     K+V K+
Sbjct: 254  SKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG--KKAPPRQDPKKSVVKS 311

Query: 2368 AASQPKGSPLKLEAKEAKKVDPKGMASGASYAKPKGEALGRGGSLTWTEKYKPKVPNDII 2189
              S  K +  K++AK  K      +A+GAS AK K        +LTWTEKY+PKVPNDII
Sbjct: 312  EESPTKKNFQKVQAKSHKD-----LAAGASPAKQKS-GTAEFSNLTWTEKYRPKVPNDII 365

Query: 2188 GNQSLVKQLHDWLMQWNEIFLNAGPKGKGKKQNDSATKKAVLLSGTPGIGKSTSAKLISQ 2009
            GNQSLVKQLHDWL  WNE FL+ G K K KK +DS  KKAVLL G PGIGK+TSAKL+SQ
Sbjct: 366  GNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQ 425

Query: 2008 MLGFQAIEVNASDSRGKADSKIIKGIGGSTANSVKELVSNESLNVNMDRSKHPKSVLIMD 1829
            MLGF+AIEVNASD+RGK+D+KI KGIGGS ANS+KEL+SNESL+  M++ KH K+VLIMD
Sbjct: 426  MLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMNQPKHHKTVLIMD 485

Query: 1828 EVDGMSAGDRGGVVDLXXXXXXXXXXXXXXCNDRYSQKLKSLVNYCLLLSYRKPTKQQMA 1649
            EVDGMSAGDRGGV DL              CNDRYSQKLKSLVNYCL+LS+RKPTKQQMA
Sbjct: 486  EVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMA 545

Query: 1648 KRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLHYMSLSSSVIKYDDMRQRLLSSS 1469
            KRL+QVANAEGLQVNEIALEELAERVNGDMRMA+NQL Y+SLS SVIKYDD+RQRLLSS 
Sbjct: 546  KRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSK 605

Query: 1468 KDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDMDLVPLLIQENYLNYRPSSAGKDDSG 1289
            KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD+DLVPLLIQENY+NYRPS+  KDD+G
Sbjct: 606  KDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSAVSKDDTG 665

Query: 1288 VKRMNLIARAAESIGSGDIFNVQIRRYRQWQLSPAGSLCSCIIPAALLHGQRETLEQGER 1109
            +KRM+LIARAAESI  GDI NVQIRR+RQWQLS +  + SCIIPA+LLHGQRETLEQ ER
Sbjct: 666  IKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHGQRETLEQYER 725

Query: 1108 NFNRFGGWLGKNSTMGKNFRLLEDVHVHLLASREIISNRQTVRVDYLSLILKQLIDPLRV 929
            NFNRFG WLGKNST GKN RLLED+HVH+LASRE  S R+ +RV+ L+L LK+L +PL  
Sbjct: 726  NFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHT 785

Query: 928  LPKDEAVQKVVEFMDAYSISQEDFDTIVELSKFQGHRNPLDGIQPAVKAALTKAYKQGSN 749
            LPKDEAV+ VVEFM  YSISQEDFDT++ELSKFQG +NPLDG+ PAVKAALTKAYK+ S 
Sbjct: 786  LPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASK 845

Query: 748  LRVVRAADMITVPGIKKAPKKRIAAMLEPVDEALAEENGDILAENXXXXXXXXXXDGIDN 569
              +VRAAD+I +PG+KKAPKKRIAA+LEP ++ +    G+ L E+          +G+  
Sbjct: 846  THMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEGVSL 905

Query: 568  VE-------------RKPQLDLQSSSSKGIQVQLDLKN-NGXXXXXXXXXXXXXXXSESV 431
                           +K QL+LQS + KG+QVQLDLK                   S++ 
Sbjct: 906  THSFLFAIIENSTNGQKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGKGGRTSQAS 965

Query: 430  EKKGGRGSGTASKRKR 383
            EKKGGRGSG+A+KRKR
Sbjct: 966  EKKGGRGSGSATKRKR 981



 Score = 65.5 bits (158), Expect = 1e-07
 Identities = 50/137 (36%), Positives = 66/137 (48%), Gaps = 26/137 (18%)
 Frame = -1

Query: 3256 MSDIRKWFMKQHDKNN--NATKTDPPP---EKNVSQ--------DSSSRRKTSKYFANDG 3116
            M DIRKWFMK HDK+N   + K  P P   EK+ S         +S+ R+ TSKYFA++ 
Sbjct: 1    MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSASAGKTGPSGGESAGRQITSKYFASEK 60

Query: 3115 KKVKDEMEAE-------------KTPVKRKTQKSSEQVHDDVKPPLAKKLHKGXXXXXXX 2975
            ++ KD  E E             ++P KRK QK +E+       P A  L K        
Sbjct: 61   QEAKDAEETEVLPIIRKSPRDTKESPAKRKFQKYNEE------SPKASPLKKSNKVDDND 114

Query: 2974 XDFVMPSASKKSVEVTP 2924
             D V+ S+ K   EVTP
Sbjct: 115  DDAVLSSSKKNMSEVTP 131