BLASTX nr result

ID: Coptis24_contig00005311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005311
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271765.1| PREDICTED: uncharacterized protein LOC100240...   209   7e-66
ref|XP_003550310.1| PREDICTED: uncharacterized protein LOC100798...   195   6e-62
ref|XP_003529564.1| PREDICTED: uncharacterized protein LOC100778...   188   7e-60
ref|XP_002314383.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-59
gb|AAQ18797.1| central motor kinesin 1 [Gossypium hirsutum]           193   5e-59

>ref|XP_002271765.1| PREDICTED: uncharacterized protein LOC100240940 [Vitis vinifera]
           gi|297736848|emb|CBI26049.3| unnamed protein product
           [Vitis vinifera]
          Length = 815

 Score =  209 bits (532), Expect(2) = 7e-66
 Identities = 135/232 (58%), Positives = 142/232 (61%), Gaps = 4/232 (1%)
 Frame = -3

Query: 882 MGGHMQQSNXXXXXXXXXXXXXXA-GAGPNNSDAGDAVMARWLQSAGLQHLASPLASTTG 706
           MGG MQQSN                 AGP  SDAGDAVMARWLQSAGLQHLASPLAST G
Sbjct: 1   MGGQMQQSNAAATALYDHPGGGTLHNAGPA-SDAGDAVMARWLQSAGLQHLASPLAST-G 58

Query: 705 IDHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXNGEXXXXXXXXXXXXXXXXXXXXXXX 526
           IDHR LPNLLMQGYGAQSAEE             NGE                       
Sbjct: 59  IDHRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGES---------------------- 96

Query: 525 GSEPYTPTAQSSGTV--DGFYSPELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXXXXXX 352
           GSEPYTPTAQ+SG V  +GFYSPE RGDFGAGLLDLHAMDDTE LL+EHV          
Sbjct: 97  GSEPYTPTAQTSGVVASEGFYSPEFRGDFGAGLLDLHAMDDTE-LLSEHVISEPFEPSPF 155

Query: 351 XXPVTRGFDNDFDAETSRQQRGQV-ADVSNRLQTNEKEITTKESNLAKIKVV 199
               TR FDNDF+  TSRQQ+GQ  AD S     NEKE  TKE+N+AKIKVV
Sbjct: 156 MPGATRAFDNDFNVMTSRQQKGQTEADPSVGFLANEKE-NTKENNVAKIKVV 206



 Score = 68.9 bits (167), Expect(2) = 7e-66
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = -1

Query: 140 AKIXXXXXXRPLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 3
           AKI      RPLNKKELSRKEDD+V+V ++AYLTVHEPKLKVDLTA
Sbjct: 201 AKIKVVVRKRPLNKKELSRKEDDIVTVSDNAYLTVHEPKLKVDLTA 246


>ref|XP_003550310.1| PREDICTED: uncharacterized protein LOC100798612 [Glycine max]
          Length = 815

 Score =  195 bits (495), Expect(2) = 6e-62
 Identities = 125/232 (53%), Positives = 141/232 (60%), Gaps = 4/232 (1%)
 Frame = -3

Query: 882 MGGHMQQSNXXXXXXXXXXXXXXA--GAGPNNSDAGDAVMARWLQSAGLQHLASPLASTT 709
           MGG MQQSN                  AGP  +DAGDAVMARWLQSAGLQHLASPLAST 
Sbjct: 1   MGGQMQQSNASATALYDHAGPGSLHNAAGPA-TDAGDAVMARWLQSAGLQHLASPLASTA 59

Query: 708 GIDHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXNGEXXXXXXXXXXXXXXXXXXXXXX 529
            ID R LPNLLMQGYGAQSAEE             NGE                      
Sbjct: 60  -IDQRLLPNLLMQGYGAQSAEEKQRLSKLMRNLNFNGES--------------------- 97

Query: 528 XGSEPYTPTAQSSGTV-DGFYSPELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXXXXXX 352
            GSEPYTPT+Q+ G V DGFYSP+ RGDFGAGLLDLHAMDDTE LL+EHV          
Sbjct: 98  -GSEPYTPTSQNLGVVSDGFYSPDFRGDFGAGLLDLHAMDDTE-LLSEHVISEPFEPSPF 155

Query: 351 XXPVTRGFDNDFDAETSRQQRGQV-ADVSNRLQTNEKEITTKESNLAKIKVV 199
               TRGF +DF++ + +Q+RG+  +D S  L TNEKE  T+E+N+AKIKVV
Sbjct: 156 MPGGTRGFVDDFNSISRKQERGEADSDASLFLPTNEKENNTRENNVAKIKVV 207



 Score = 70.1 bits (170), Expect(2) = 6e-62
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -1

Query: 140 AKIXXXXXXRPLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 3
           AKI      RPLNKKEL++KEDD+V+VY++AYLTVHEPKLKVDLTA
Sbjct: 202 AKIKVVVRKRPLNKKELAKKEDDIVTVYDNAYLTVHEPKLKVDLTA 247


>ref|XP_003529564.1| PREDICTED: uncharacterized protein LOC100778915 [Glycine max]
          Length = 814

 Score =  188 bits (477), Expect(2) = 7e-60
 Identities = 123/234 (52%), Positives = 140/234 (59%), Gaps = 6/234 (2%)
 Frame = -3

Query: 882 MGGHMQQSNXXXXXXXXXXXXXXA--GAGPNNSDAGDAVMARWLQSAGLQHLASPLASTT 709
           MGG MQQSN                  AGP  +DAGDAVMARWLQSAGLQHLASPLAST 
Sbjct: 1   MGGQMQQSNAAATALYDHAGAGSLHYAAGPA-TDAGDAVMARWLQSAGLQHLASPLASTA 59

Query: 708 GIDHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXNGEXXXXXXXXXXXXXXXXXXXXXX 529
            ID R LPNLLMQGYGAQSAEE             NGE                      
Sbjct: 60  -IDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGES--------------------- 97

Query: 528 XGSEPYTPTAQSSGTV---DGFYSPELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXXXX 358
            GSEPYTPT+Q+ G V   DGFYSP+ RGDFGAGLLDLHAMDDTE LL+EHV        
Sbjct: 98  -GSEPYTPTSQNLGGVAVSDGFYSPDFRGDFGAGLLDLHAMDDTE-LLSEHVISEPFEPS 155

Query: 357 XXXXPVTRGFDNDFDAETSRQQRGQV-ADVSNRLQTNEKEITTKESNLAKIKVV 199
                 +RGF++DF+    +Q+RG+  +D S  L TNEK+  T+E+N+AKIKVV
Sbjct: 156 PFMPGGSRGFEDDFNPINRKQERGEADSDASLFLPTNEKD-NTRENNVAKIKVV 208



 Score = 70.1 bits (170), Expect(2) = 7e-60
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -1

Query: 140 AKIXXXXXXRPLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 3
           AKI      RPLNKKEL++KEDD+V+VY++AYLTVHEPKLKVDLTA
Sbjct: 203 AKIKVVVRKRPLNKKELAKKEDDIVTVYDNAYLTVHEPKLKVDLTA 248


>ref|XP_002314383.1| predicted protein [Populus trichocarpa] gi|222863423|gb|EEF00554.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score =  196 bits (499), Expect(2) = 1e-59
 Identities = 122/232 (52%), Positives = 141/232 (60%), Gaps = 4/232 (1%)
 Frame = -3

Query: 882 MGGHMQQSNXXXXXXXXXXXXXXAGAGPNNSDAGDAVMARWLQSAGLQHLASPLASTTGI 703
           MGG MQQ+N               G+   ++DAGDAV ARWLQSAGLQHLASPLAST GI
Sbjct: 1   MGGKMQQTNASAASTALYDHAAAGGSLGPSADAGDAVTARWLQSAGLQHLASPLAST-GI 59

Query: 702 DHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXNGEXXXXXXXXXXXXXXXXXXXXXXXG 523
           DHR LP++LMQGYGAQSAEE             NGE                        
Sbjct: 60  DHRLLPHILMQGYGAQSAEEKQRLFKLMRNLNFNGEAV---------------------- 97

Query: 522 SEPYTPTAQSSGTV---DGFYSPELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXXXXXX 352
           SEPY P+AQ+S  V   DGFYSP+ RGDFGAGLLDLHAMDDTE LL+EH           
Sbjct: 98  SEPYIPSAQTSTGVSASDGFYSPDFRGDFGAGLLDLHAMDDTE-LLSEHAISEPFDPSPL 156

Query: 351 XXPVTRGFDNDFDAETSRQQRGQV-ADVSNRLQTNEKEITTKESNLAKIKVV 199
              V++GF+NDF+  +SRQQR Q  AD+S    TNEKE +TKE+N+AKIKVV
Sbjct: 157 MPGVSKGFENDFNLTSSRQQREQTDADLSVPFPTNEKENSTKENNVAKIKVV 208



 Score = 60.8 bits (146), Expect(2) = 1e-59
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = -1

Query: 140 AKIXXXXXXRPLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 3
           AKI      RPLNKKEL+RKEDD+V+VY++A L VHEP+LKVDLTA
Sbjct: 203 AKIKVVVRKRPLNKKELARKEDDIVTVYDNA-LAVHEPRLKVDLTA 247


>gb|AAQ18797.1| central motor kinesin 1 [Gossypium hirsutum]
          Length = 909

 Score =  193 bits (491), Expect(2) = 5e-59
 Identities = 120/238 (50%), Positives = 142/238 (59%), Gaps = 10/238 (4%)
 Frame = -3

Query: 882 MGGHMQQSNXXXXXXXXXXXXXXAG----AGPNNSDAGDAVMARWLQSAGLQHLASPLAS 715
           MGG MQQSN               G    AGP   DAGDAVMARWLQSAGLQHLASPLAS
Sbjct: 1   MGGQMQQSNAAAAALYDHAGGGGGGSLHNAGPAGGDAGDAVMARWLQSAGLQHLASPLAS 60

Query: 714 TTGIDHRFLPNLLMQGYGAQSAEEXXXXXXXXXXXXXNGEXXXXXXXXXXXXXXXXXXXX 535
           + GID R LPNLLMQGYGAQSAEE             +GE                    
Sbjct: 61  S-GIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFSGEP------------------- 100

Query: 534 XXXGSEPYTPTAQS---SGTVDGFYSPELRGDFGAGLLDLHAMDDTELLLTEHVXXXXXX 364
              GSEPYTPTAQS    GT DGFYSPE RGDFGAGLLDLHAMDDTE LL+EHV      
Sbjct: 101 ---GSEPYTPTAQSLGGPGTSDGFYSPEFRGDFGAGLLDLHAMDDTE-LLSEHVISEPFE 156

Query: 363 XXXXXXPVTRGFDNDFDAETSRQQRGQVADV---SNRLQTNEKEITTKESNLAKIKVV 199
                  + + F+++ +  T+RQQ+ +++D    ++ +  NEKE++ +E+N+AKIKVV
Sbjct: 157 PSPFMPSLNKEFEDELNVTTNRQQK-EISDADASASLISANEKEMSARENNVAKIKVV 213



 Score = 62.0 bits (149), Expect(2) = 5e-59
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = -1

Query: 140 AKIXXXXXXRPLNKKELSRKEDDVVSVYESAYLTVHEPKLKVDLTA 3
           AKI      RPLNKKE+SRKEDD+V+V E+A LTVHEPKLKVDLTA
Sbjct: 208 AKIKVVVRKRPLNKKEISRKEDDIVTVSENA-LTVHEPKLKVDLTA 252


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