BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005257
         (1501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease ...   104   7e-20
ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]   103   9e-20
ref|XP_002269417.2| PREDICTED: exonuclease 1-like [Vitis vinifera]    100   8e-19
ref|XP_003532774.1| PREDICTED: exonuclease 1-like [Glycine max]        98   5e-18
ref|NP_001117381.1| exonuclease 1 [Arabidopsis thaliana] gi|3321...    97   8e-18

>ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1-like [Cucumis sativus]
          Length = 685

 Score =  104 bits (259), Expect = 7e-20
 Identities = 62/165 (37%), Positives = 92/165 (55%)
 Frame = -3

Query: 1466 KGICLLIEFKQLRGDGIYGRLTFQQFSEACLFAGCDYLKGLPGVDLNKAANLILQHSSYE 1287
            +G+    +  Q   D  +   T Q   E C+ +GCDYL  LPG+ L +A  LI +  SYE
Sbjct: 191  QGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRAHALIXKFLSYE 250

Query: 1286 KVITHLVDSNQWTKAYPKLEDYKRKYKMAVLTYNHQRIYNMHDEKIDYLTTLPEDLQVEN 1107
            KVI HL  S   T A P L  Y+  +K A+LT+ HQR+Y+   E I +L+ + +   +E+
Sbjct: 251  KVIRHLRYS---TVAVPHL--YEESFKKAILTFQHQRVYDPITEDIVHLSQISD--HIED 303

Query: 1106 ELAFLGPFIPKDTVQGIAQGELNPKTQKPLYDGGRGCGTNKRIHE 972
            +L FLGP IP+   +GIA+G+++P T  P  +     G    +HE
Sbjct: 304  DLDFLGPSIPQHIAKGIAEGDIDPCTNLPFQEQDTNTGV---VHE 345


>ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
          Length = 685

 Score =  103 bits (258), Expect = 9e-20
 Identities = 62/165 (37%), Positives = 92/165 (55%)
 Frame = -3

Query: 1466 KGICLLIEFKQLRGDGIYGRLTFQQFSEACLFAGCDYLKGLPGVDLNKAANLILQHSSYE 1287
            +G+    +  Q   D  +   T Q   E C+ +GCDYL  LPG+ L +A  LI +  SYE
Sbjct: 191  QGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRAHALIKKFLSYE 250

Query: 1286 KVITHLVDSNQWTKAYPKLEDYKRKYKMAVLTYNHQRIYNMHDEKIDYLTTLPEDLQVEN 1107
            KVI HL  S   T A P L  Y+  +K A+LT+ HQR+Y+   E I +L+ + +   +E+
Sbjct: 251  KVIRHLRYS---TVAVPHL--YEESFKKAILTFQHQRVYDPITEDIVHLSQISD--HIED 303

Query: 1106 ELAFLGPFIPKDTVQGIAQGELNPKTQKPLYDGGRGCGTNKRIHE 972
            +L FLGP IP+   +GIA+G+++P T  P  +     G    +HE
Sbjct: 304  DLDFLGPSIPQHIAKGIAEGDIDPCTNLPFQEQDTNTGV---VHE 345


>ref|XP_002269417.2| PREDICTED: exonuclease 1-like [Vitis vinifera]
          Length = 658

 Score =  100 bits (250), Expect = 8e-19
 Identities = 73/203 (35%), Positives = 105/203 (51%), Gaps = 6/203 (2%)
 Frame = -3

Query: 1448 IEFK----QLRGDGIYGRLTFQQFSEACLFAGCDYLKGLPGVDLNKAANLILQHSSYEKV 1281
            +EFK    Q   +  +   T Q   E C+ +GCDYL+ LPG+ L KA  LI +  SY+KV
Sbjct: 193  VEFKYSMIQQNKELSFAGFTKQMILEMCILSGCDYLQSLPGMGLKKAHALIKKFKSYDKV 252

Query: 1280 ITHLVDSNQWTKAYPKLEDYKRKYKMAVLTYNHQRIYNMHDEKIDYLTTLPEDLQVENEL 1101
            I HL      T + P L  Y+  +K A+LT+ HQR+Y+   E I +L+ L ++  V ++L
Sbjct: 253  IKHL---RYATGSVPPL--YEESFKKAMLTFQHQRVYDPTIEDIVHLSVLSDN--VGDDL 305

Query: 1100 AFLGPFIPKDTVQGIAQGELNPKTQKPL--YDGGRGCGTNKRIHEEHTDVYSGRDHEPDP 927
             FLGP I +D  +GIA G+L+P T+ P    +   G   +     E     S R     P
Sbjct: 306  DFLGPLISQDIAKGIATGDLDPFTKMPFQGQNASDGLLLDGTYQLESFKPESERKKIELP 365

Query: 926  FSQKNTTCNYFASGNCQKGTKCR 858
             +QKN   NYF   + +   K R
Sbjct: 366  -AQKNLLTNYFCFTSLEAKGKFR 387


>ref|XP_003532774.1| PREDICTED: exonuclease 1-like [Glycine max]
          Length = 743

 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 62/185 (33%), Positives = 94/185 (50%), Gaps = 5/185 (2%)
 Frame = -3

Query: 1397 QQFSEACLFAGCDYLKGLPGVDLNKAANLILQHSSYEKVITHLVDSNQWTKAYPKLEDYK 1218
            Q   E C+ +GCDYL+ LPG+ L +A   I +  SY+KV+ HL  S      +     Y+
Sbjct: 214  QMLLEMCILSGCDYLQSLPGMGLKRAHASIKKFRSYDKVLKHLRYSGVSVPPF-----YE 268

Query: 1217 RKYKMAVLTYNHQRIYNMHDEKIDYLTTLPEDLQVENELAFLGPFIPKDTVQGIAQGELN 1038
              +K A+ T+ +QR+Y+  +E I +L+ +P+D  + +EL FLGP +PKD  Q IA+G+L+
Sbjct: 269  ESFKKAIFTFQYQRVYDPINENIVHLSNIPDD--IGDELDFLGPSMPKDIAQRIAKGDLD 326

Query: 1037 PKTQKPLYDGGRGCGTNKRIHEEHTDVYSGRDHEP-----DPFSQKNTTCNYFASGNCQK 873
            P T+ P      G     R+    T  +     E      D   QKN    YF   + + 
Sbjct: 327  PITKMPF----EGENLTARLAIAGTSQFKTHHSESAKKKIDLPVQKNLLTKYFCFASLEA 382

Query: 872  GTKCR 858
              K R
Sbjct: 383  KRKFR 387


>ref|NP_001117381.1| exonuclease 1 [Arabidopsis thaliana] gi|332192992|gb|AEE31113.1|
            exonuclease 1 [Arabidopsis thaliana]
          Length = 581

 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 52/126 (41%), Positives = 81/126 (64%)
 Frame = -3

Query: 1397 QQFSEACLFAGCDYLKGLPGVDLNKAANLILQHSSYEKVITHLVDSNQWTKAYPKLEDYK 1218
            Q   E C+ +GCDYL+ LPG+ L +A  LI +  SY++VI HL  S   T + P L  Y+
Sbjct: 60   QMLLEMCILSGCDYLQSLPGMGLKRAHALITKFKSYDRVIKHLKYS---TVSVPPL--YE 114

Query: 1217 RKYKMAVLTYNHQRIYNMHDEKIDYLTTLPEDLQVENELAFLGPFIPKDTVQGIAQGELN 1038
              +K A+LT+ HQR+Y+ + E I +L  + ++L  +++  F+GP +P+D  +GIA G+L+
Sbjct: 115  ESFKRALLTFKHQRVYDPNAEDIIHLCDISDNLGEDSD--FVGPSMPQDIAKGIALGQLD 172

Query: 1037 PKTQKP 1020
            P TQ P
Sbjct: 173  PFTQLP 178