BLASTX nr result

ID: Coptis24_contig00005186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005186
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20163.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   118   4e-25
gb|ACD56636.1| disease resistance related protein [Gossypium rai...   116   2e-24
ref|XP_002325299.1| BED finger-nbs resistance protein [Populus t...   114   8e-24
ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...   114   1e-23

>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/117 (47%), Positives = 78/117 (66%)
 Frame = +1

Query: 1   KNLEMVWECIVGDEFQKIGVYGMGGVGKTTLMKNINNRLLQQQSRFESVLWVTVSKDVNA 180
           +NLE +W C+   E Q IGV+GMGG+GKTT++ +I+N LL+++  F  V WVTVSKD + 
Sbjct: 151 RNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHNLLLEKKDTFGLVYWVTVSKDSSV 210

Query: 181 QKLQSEIAKKVTLDLSAEQDEATXXXXXXXXXXXXGKFVLILDDIWEAFDLQDLGVP 351
           +KLQ  IA+K+ LDLS E+DE               KFVLI DD+WE +  +++G+P
Sbjct: 211 RKLQDVIAEKINLDLSKEEDERLRSALLFEALQKEKKFVLIFDDVWEVYPPREVGIP 267


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Vitis vinifera]
          Length = 1016

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/117 (47%), Positives = 78/117 (66%)
 Frame = +1

Query: 1   KNLEMVWECIVGDEFQKIGVYGMGGVGKTTLMKNINNRLLQQQSRFESVLWVTVSKDVNA 180
           +NLE +W C+   E Q IGV+GMGG+GKTT++ +I+N LL+++  F  V WVTVSKD + 
Sbjct: 151 RNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHNLLLEKKDTFGLVYWVTVSKDSSV 210

Query: 181 QKLQSEIAKKVTLDLSAEQDEATXXXXXXXXXXXXGKFVLILDDIWEAFDLQDLGVP 351
           +KLQ  IA+K+ LDLS E+DE               KFVLI DD+WE +  +++G+P
Sbjct: 211 RKLQDVIAEKINLDLSKEEDERLRSALLFEALQKEKKFVLIFDDVWEVYPPREVGIP 267


>gb|ACD56636.1| disease resistance related protein [Gossypium raimondii]
          Length = 257

 Score =  116 bits (291), Expect = 2e-24
 Identities = 51/118 (43%), Positives = 79/118 (66%)
 Frame = +1

Query: 7   LEMVWECIVGDEFQKIGVYGMGGVGKTTLMKNINNRLLQQQSRFESVLWVTVSKDVNAQK 186
           +E +W+C++ DE  KIGV+GMGGVGKT++MK INN+LLQ++ +F+ V+W+T  K+++  K
Sbjct: 121 MEEIWKCLMDDEVGKIGVWGMGGVGKTSIMKLINNQLLQEREKFDIVIWITAPKEMSIAK 180

Query: 187 LQSEIAKKVTLDLSAEQDEATXXXXXXXXXXXXGKFVLILDDIWEAFDLQDLGVPEPT 360
           LQ  IA ++ +    ++ E               +FV+I DDIWEA  L+ LG+PEP+
Sbjct: 181 LQKAIASQIKVTFCGDECETRRARMLFETLSWKSRFVVIFDDIWEAVSLEKLGIPEPS 238


>ref|XP_002325299.1| BED finger-nbs resistance protein [Populus trichocarpa]
           gi|222862174|gb|EEE99680.1| BED finger-nbs resistance
           protein [Populus trichocarpa]
          Length = 1288

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/119 (42%), Positives = 79/119 (66%)
 Frame = +1

Query: 1   KNLEMVWECIVGDEFQKIGVYGMGGVGKTTLMKNINNRLLQQQSRFESVLWVTVSKDVNA 180
           +N  ++W  ++ DE   IG+YGMGGVGKTT+MK+I+N+LL++      V WVTVS+D + 
Sbjct: 182 QNTNLIWSWLMDDEVSTIGIYGMGGVGKTTMMKHIHNKLLERLGISHCVYWVTVSRDFSI 241

Query: 181 QKLQSEIAKKVTLDLSAEQDEATXXXXXXXXXXXXGKFVLILDDIWEAFDLQDLGVPEP 357
           ++LQ+ IAK +  DLS+E D+               K++LILDD+W  F+L ++G+P+P
Sbjct: 242 ERLQNLIAKCLRFDLSSEDDDLRRAVKLSKELRKKQKWILILDDLWNTFELHEVGIPDP 300


>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 958

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/117 (47%), Positives = 76/117 (64%)
 Frame = +1

Query: 1   KNLEMVWECIVGDEFQKIGVYGMGGVGKTTLMKNINNRLLQQQSRFESVLWVTVSKDVNA 180
           KN EM+W  ++ DE   IG+YGMGGVGK++L  +I+N+LLQ+ + F+ VLW+TVS+D + 
Sbjct: 113 KNREMIWSWLMKDEVSSIGIYGMGGVGKSSLATHIHNQLLQRPTSFKHVLWITVSQDFSI 172

Query: 181 QKLQSEIAKKVTLDLSAEQDEATXXXXXXXXXXXXGKFVLILDDIWEAFDLQDLGVP 351
            KLQ  IA  + L+LS E DE              GK VLILDD+W  F L+ +G+P
Sbjct: 173 SKLQYLIANAINLNLSNEDDEKKRAAKLYKALVAKGKSVLILDDLWNHFHLEKVGIP 229


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