BLASTX nr result

ID: Coptis24_contig00005116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005116
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255...   237   3e-60
emb|CBI40569.3| unnamed protein product [Vitis vinifera]              224   2e-56
ref|XP_002523320.1| nucleotide binding protein, putative [Ricinu...   199   6e-49
ref|XP_003529883.1| PREDICTED: uncharacterized protein LOC100789...   197   2e-48
ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-45

>ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255258 [Vitis vinifera]
          Length = 2572

 Score =  237 bits (604), Expect = 3e-60
 Identities = 121/270 (44%), Positives = 167/270 (61%)
 Frame = +2

Query: 11   MPSVQQKWSSSDGFSSHSVPYHMATGYSDGTIRLWRSNCSISPTPQSELANLPWELVGSF 190
            +PS+QQ   SS+        YHMATG SDGT++LWRSN S    P     +  WELVG F
Sbjct: 742  IPSLQQGQVSSNDLHIDIPAYHMATGCSDGTLKLWRSNSSRLSNP-----HFLWELVGMF 796

Query: 191  NTHQGPVTKISLSSCGGKIATISMKNNLDSLGTLCIWRSVCIVNSGKILLEDKLPLSGEL 370
              HQGP++ ISL+ CG KIATI M  +L +  TL IW SV +  +G  +LED + + G++
Sbjct: 797  VAHQGPISAISLTDCGQKIATICMAGHLSTASTLRIWESVHLTGAGSFVLEDTVSVDGDV 856

Query: 371  VALNWFSIGNGQLLLGVCSQHELRVYAQRSRVTQTLGKSGKKSETHMWYCIATGSTSLVA 550
            VAL+W ++GNGQLLLGVC Q+EL+VYAQR    QTL  SGK  E H+W+C+A+  T    
Sbjct: 857  VALSWLALGNGQLLLGVCMQNELQVYAQRRCGGQTLLSSGKSLELHIWFCMASARTFPSI 916

Query: 551  RDFLWGPSAATVLVHERCFCLFSKWLLHMDEKQQAVFYVQCKKDKNPCCMGVTEEGIICD 730
             DFLWGP A  V++H   FCLF +WLL +D K Q+  + +C K  +P      ++ ++  
Sbjct: 917  HDFLWGPKATAVVIHSNYFCLFGQWLLSVDRKDQSNCHPECTKG-SPDFKFEADKDVLSI 975

Query: 731  VFSDCNACDTKELSLDGINEKCKSASPLKL 820
            + +D    D K LS++    +CKS  P+ +
Sbjct: 976  ISTDSGILDFKALSMEDSTGECKSKLPINI 1005


>emb|CBI40569.3| unnamed protein product [Vitis vinifera]
          Length = 2065

 Score =  224 bits (570), Expect = 2e-56
 Identities = 111/223 (49%), Positives = 145/223 (65%)
 Frame = +2

Query: 11   MPSVQQKWSSSDGFSSHSVPYHMATGYSDGTIRLWRSNCSISPTPQSELANLPWELVGSF 190
            +PS+QQ   SS+        YHMATG SDGT++LWRSN S    P     +  WELVG F
Sbjct: 429  IPSLQQGQVSSNDLHIDIPAYHMATGCSDGTLKLWRSNSSRLSNP-----HFLWELVGMF 483

Query: 191  NTHQGPVTKISLSSCGGKIATISMKNNLDSLGTLCIWRSVCIVNSGKILLEDKLPLSGEL 370
              HQGP++ ISL+ CG KIATI M  +L +  TL IW SV +  +G  +LED + + G++
Sbjct: 484  VAHQGPISAISLTDCGQKIATICMAGHLSTASTLRIWESVHLTGAGSFVLEDTVSVDGDV 543

Query: 371  VALNWFSIGNGQLLLGVCSQHELRVYAQRSRVTQTLGKSGKKSETHMWYCIATGSTSLVA 550
            VAL+W ++GNGQLLLGVC Q+EL+VYAQR    QTL  SGK  E H+W+C+A+  T    
Sbjct: 544  VALSWLALGNGQLLLGVCMQNELQVYAQRRCGGQTLLSSGKSLELHIWFCMASARTFPSI 603

Query: 551  RDFLWGPSAATVLVHERCFCLFSKWLLHMDEKQQAVFYVQCKK 679
             DFLWGP A  V++H   FCLF +WLL +D K Q+  + +C K
Sbjct: 604  HDFLWGPKATAVVIHSNYFCLFGQWLLSVDRKDQSNCHPECTK 646


>ref|XP_002523320.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223537408|gb|EEF39036.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 2299

 Score =  199 bits (506), Expect = 6e-49
 Identities = 103/232 (44%), Positives = 140/232 (60%), Gaps = 1/232 (0%)
 Frame = +2

Query: 71   YHMATGYSDGTIRLWRSNCSISPTPQSELANLPWELVGSFNTHQGPVTKISLSSCGGKIA 250
            Y MATG  DGT+R+WRSN S  PTP      + WELVG+F  H+GPVT I L+ CG KIA
Sbjct: 727  YIMATGCFDGTLRMWRSNSSKLPTPA-----ILWELVGNFVAHEGPVTAIRLTDCGRKIA 781

Query: 251  TISMKNNLDSLGTLCIWRSVCIVNSGKILLEDKLPLSGELVALNWFSIGNGQLLLGVCSQ 430
            T+S  +N+D    L IW SV ++ +G  +LE  L + G++VALNW ++GNGQ  LGVC Q
Sbjct: 782  TLSAGSNMDGSSILHIWDSVHLIGAGSFVLEAILSIDGDVVALNWLTLGNGQFCLGVCMQ 841

Query: 431  HELRVYAQRSRVTQTLGKSGKKSETHMWYCIATGSTSLVARDFLWGPSAATVLVHERCFC 610
            +ELRVYAQ+  V QTL   GK      W+CIA   T    RD LWG  AA V++H+  + 
Sbjct: 842  NELRVYAQQRSVGQTLVNLGKSLNGENWFCIAVAHTLPAIRDLLWGSQAAAVIIHDSYYS 901

Query: 611  LFSKWLLHMDEKQQAVFYVQCKKDKNPC-CMGVTEEGIICDVFSDCNACDTK 763
            + S+WL  +D K      V+C  +     C G     I+  +F+DC+  +++
Sbjct: 902  VLSQWLFFVDNKHP----VKCHANSVVVDCEGGKGTDILSSIFTDCDIANSQ 949


>ref|XP_003529883.1| PREDICTED: uncharacterized protein LOC100789935 [Glycine max]
          Length = 2468

 Score =  197 bits (501), Expect = 2e-48
 Identities = 105/266 (39%), Positives = 154/266 (57%)
 Frame = +2

Query: 23   QQKWSSSDGFSSHSVPYHMATGYSDGTIRLWRSNCSISPTPQSELANLPWELVGSFNTHQ 202
            QQ++S ++   S    Y MATG SDG ++LW+S    S T      +LPWELVGSF  H 
Sbjct: 713  QQEFSLANDLCSSYPAYIMATGSSDGILKLWKSKPGNSLTQ-----HLPWELVGSFVAHD 767

Query: 203  GPVTKISLSSCGGKIATISMKNNLDSLGTLCIWRSVCIVNSGKILLEDKLPLSGELVALN 382
            GP+  I L++CG KIAT   ++N +++ T+ IW +V ++++G  +LEDK+    +++AL 
Sbjct: 768  GPIKDICLANCGEKIATFCYESNSNAINTIHIWDAVPLISAGTFILEDKIKTESDVIALK 827

Query: 383  WFSIGNGQLLLGVCSQHELRVYAQRSRVTQTLGKSGKKSETHMWYCIATGSTSLVARDFL 562
            W ++G G+LLLGVC Q+EL VYA +  V  TL  S    + ++W CIA   TS+   DFL
Sbjct: 828  WLTLGTGELLLGVCLQNELHVYAPKRCVGTTLSDSVNFPKMNIWVCIAYAHTSIPIYDFL 887

Query: 563  WGPSAATVLVHERCFCLFSKWLLHMDEKQQAVFYVQCKKDKNPCCMGVTEEGIICDVFSD 742
            WGP AA V++H   F +FS WL H D+KQ + F     K     C     E I+  VF++
Sbjct: 888  WGPRAAAVVIHGNYFSIFSHWLFHEDKKQGSKFRPCDSKPNTYNCKDEIYEDILSSVFTE 947

Query: 743  CNACDTKELSLDGINEKCKSASPLKL 820
             +    +E SL   +    S   +K+
Sbjct: 948  YDIGAYREQSLGDSHADFDSVQSIKI 973


>ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|222844366|gb|EEE81913.1|
            predicted protein [Populus trichocarpa]
          Length = 2434

 Score =  188 bits (478), Expect = 1e-45
 Identities = 93/211 (44%), Positives = 132/211 (62%)
 Frame = +2

Query: 17   SVQQKWSSSDGFSSHSVPYHMATGYSDGTIRLWRSNCSISPTPQSELANLPWELVGSFNT 196
            S+ +   S+    S    Y MATG SDG+++LWRSN S   TPQ     +PWELVG F  
Sbjct: 718  SMPESLGSNKDLCSGVPAYVMATGCSDGSLKLWRSNSSKQSTPQ-----IPWELVGKFVA 772

Query: 197  HQGPVTKISLSSCGGKIATISMKNNLDSLGTLCIWRSVCIVNSGKILLEDKLPLSGELVA 376
            HQGPV+ I L++CG KIATIS  ++LD    L +W +V ++ +G  +LED++ +  ++++
Sbjct: 773  HQGPVSAICLTACGRKIATISAGSHLDDTSILHVWEAVHVIGAGSFILEDRIAVGRDVIS 832

Query: 377  LNWFSIGNGQLLLGVCSQHELRVYAQRSRVTQTLGKSGKKSETHMWYCIATGSTSLVARD 556
            LNW ++GNGQL LG+C  +EL+VYAQ+    QTL  S +    + W CIA   T    RD
Sbjct: 833  LNWLTLGNGQLFLGICMHNELQVYAQKHHGGQTL-LSPQSLNVNSWSCIAVSHTFPAIRD 891

Query: 557  FLWGPSAATVLVHERCFCLFSKWLLHMDEKQ 649
            FLWGP+A  ++VH+    L S+WL    +KQ
Sbjct: 892  FLWGPNATAIIVHDSYISLLSQWLFLEGDKQ 922


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