BLASTX nr result

ID: Coptis24_contig00004991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004991
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245...   345   8e-93
ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-contai...   343   5e-92
ref|XP_003618034.1| Transmembrane emp24 domain-containing protei...   339   7e-91
ref|XP_003618033.1| Transmembrane emp24 domain-containing protei...   339   7e-91
ref|XP_003545588.1| PREDICTED: transmembrane emp24 domain-contai...   337   2e-90

>ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245903 isoform 2 [Vitis
           vinifera] gi|225447506|ref|XP_002265305.1| PREDICTED:
           uncharacterized protein LOC100245903 isoform 1 [Vitis
           vinifera] gi|296085048|emb|CBI28463.3| unnamed protein
           product [Vitis vinifera]
          Length = 214

 Score =  345 bits (886), Expect = 8e-93
 Identities = 159/188 (84%), Positives = 178/188 (94%)
 Frame = -2

Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632
           GIRFV+DRE+CFSH+VQYEGDTVHVSFVVIKADA WHY+EDGVDLV+KGPSGDQ++D RD
Sbjct: 27  GIRFVVDREDCFSHDVQYEGDTVHVSFVVIKADASWHYAEDGVDLVIKGPSGDQIHDFRD 86

Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452
           KTSEKF+F+  K+GLH+FCFTNKSPY ETIDFDVH GHFTY DQHAKDEHFNPLLEQI+K
Sbjct: 87  KTSEKFEFVAQKKGLHRFCFTNKSPYQETIDFDVHVGHFTYYDQHAKDEHFNPLLEQIAK 146

Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272
           LEEALYN+QFEQHWLEAQTDRQA+VNEGMS+RA+HKAMFESV L+GAS LQ+YLL+RLFE
Sbjct: 147 LEEALYNIQFEQHWLEAQTDRQAIVNEGMSQRAVHKAMFESVALVGASVLQIYLLQRLFE 206

Query: 271 RKLGTSRV 248
           RKLG SRV
Sbjct: 207 RKLGISRV 214


>ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-containing protein
           p24beta2-like [Cucumis sativus]
          Length = 214

 Score =  343 bits (879), Expect = 5e-92
 Identities = 158/188 (84%), Positives = 175/188 (93%)
 Frame = -2

Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632
           GIRFVIDREECFSH VQYEGDTVHVSFVVIKAD+PWHY +DGVDLV+KGPSG+ L+D RD
Sbjct: 27  GIRFVIDREECFSHHVQYEGDTVHVSFVVIKADSPWHYGDDGVDLVIKGPSGEHLHDFRD 86

Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452
           KTSEK +F+ H +GLH+FCFTNKSPYHETIDFDVH GHF+Y +QHAKDEHFNPL++QISK
Sbjct: 87  KTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHFNPLMDQISK 146

Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272
           LEEALYN+QFEQHWLEAQTDRQA+VNEGM KRAIHKAMFES  L+GAS LQVYLL+RLFE
Sbjct: 147 LEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAIHKAMFESAALVGASVLQVYLLQRLFE 206

Query: 271 RKLGTSRV 248
           RKLGTSRV
Sbjct: 207 RKLGTSRV 214


>ref|XP_003618034.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355519369|gb|AET00993.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
          Length = 213

 Score =  339 bits (869), Expect = 7e-91
 Identities = 154/188 (81%), Positives = 178/188 (94%)
 Frame = -2

Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632
           GIRFVIDR+ECFSH+V+YEGDTVHVSFVVIKAD+PWHY ++GVDLVVKGP+G+Q+ D RD
Sbjct: 26  GIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPAGEQIQDFRD 85

Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452
           KTS+KF+F+ HK G+H+FCFTNKSPYHETIDFDVH GHF+Y +QHAKDEHFNPLLEQI+K
Sbjct: 86  KTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQHAKDEHFNPLLEQIAK 145

Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272
           LEEALYN+QFEQHWLEAQTDRQA+VN+GMS+RA+HKA+FES  LIGAS LQVYLL+RLFE
Sbjct: 146 LEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAALIGASALQVYLLRRLFE 205

Query: 271 RKLGTSRV 248
           RKLGTSRV
Sbjct: 206 RKLGTSRV 213


>ref|XP_003618033.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355519368|gb|AET00992.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
           gi|388521389|gb|AFK48756.1| unknown [Medicago
           truncatula]
          Length = 214

 Score =  339 bits (869), Expect = 7e-91
 Identities = 154/188 (81%), Positives = 178/188 (94%)
 Frame = -2

Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632
           GIRFVIDR+ECFSH+V+YEGDTVHVSFVVIKAD+PWHY ++GVDLVVKGP+G+Q+ D RD
Sbjct: 27  GIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPAGEQIQDFRD 86

Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452
           KTS+KF+F+ HK G+H+FCFTNKSPYHETIDFDVH GHF+Y +QHAKDEHFNPLLEQI+K
Sbjct: 87  KTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQHAKDEHFNPLLEQIAK 146

Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272
           LEEALYN+QFEQHWLEAQTDRQA+VN+GMS+RA+HKA+FES  LIGAS LQVYLL+RLFE
Sbjct: 147 LEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAALIGASALQVYLLRRLFE 206

Query: 271 RKLGTSRV 248
           RKLGTSRV
Sbjct: 207 RKLGTSRV 214


>ref|XP_003545588.1| PREDICTED: transmembrane emp24 domain-containing protein-like
           [Glycine max]
          Length = 212

 Score =  337 bits (865), Expect = 2e-90
 Identities = 154/188 (81%), Positives = 175/188 (93%)
 Frame = -2

Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632
           GIRFVIDR+ECFSH+V+YEGDTVHVSFVVIKAD+PWHY ++GVDLVVKGPSG+Q+ D RD
Sbjct: 25  GIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPSGEQIQDFRD 84

Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452
           KTSEKFDF+ HK G+H+FCFTNKSPYHET+DFDVH GHF+Y +QHAKDEHF PLLEQI K
Sbjct: 85  KTSEKFDFVAHKSGVHKFCFTNKSPYHETVDFDVHVGHFSYFEQHAKDEHFTPLLEQIGK 144

Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272
           LEEALYN+QFEQHWLEAQTDRQA+VN+ MS+RA+HKA+FES  LIGAS LQVYLL+RLFE
Sbjct: 145 LEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAVHKAIFESAALIGASALQVYLLQRLFE 204

Query: 271 RKLGTSRV 248
           RKLGTSRV
Sbjct: 205 RKLGTSRV 212


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