BLASTX nr result
ID: Coptis24_contig00004991
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004991 (1031 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245... 345 8e-93 ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-contai... 343 5e-92 ref|XP_003618034.1| Transmembrane emp24 domain-containing protei... 339 7e-91 ref|XP_003618033.1| Transmembrane emp24 domain-containing protei... 339 7e-91 ref|XP_003545588.1| PREDICTED: transmembrane emp24 domain-contai... 337 2e-90 >ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245903 isoform 2 [Vitis vinifera] gi|225447506|ref|XP_002265305.1| PREDICTED: uncharacterized protein LOC100245903 isoform 1 [Vitis vinifera] gi|296085048|emb|CBI28463.3| unnamed protein product [Vitis vinifera] Length = 214 Score = 345 bits (886), Expect = 8e-93 Identities = 159/188 (84%), Positives = 178/188 (94%) Frame = -2 Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632 GIRFV+DRE+CFSH+VQYEGDTVHVSFVVIKADA WHY+EDGVDLV+KGPSGDQ++D RD Sbjct: 27 GIRFVVDREDCFSHDVQYEGDTVHVSFVVIKADASWHYAEDGVDLVIKGPSGDQIHDFRD 86 Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452 KTSEKF+F+ K+GLH+FCFTNKSPY ETIDFDVH GHFTY DQHAKDEHFNPLLEQI+K Sbjct: 87 KTSEKFEFVAQKKGLHRFCFTNKSPYQETIDFDVHVGHFTYYDQHAKDEHFNPLLEQIAK 146 Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272 LEEALYN+QFEQHWLEAQTDRQA+VNEGMS+RA+HKAMFESV L+GAS LQ+YLL+RLFE Sbjct: 147 LEEALYNIQFEQHWLEAQTDRQAIVNEGMSQRAVHKAMFESVALVGASVLQIYLLQRLFE 206 Query: 271 RKLGTSRV 248 RKLG SRV Sbjct: 207 RKLGISRV 214 >ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-containing protein p24beta2-like [Cucumis sativus] Length = 214 Score = 343 bits (879), Expect = 5e-92 Identities = 158/188 (84%), Positives = 175/188 (93%) Frame = -2 Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632 GIRFVIDREECFSH VQYEGDTVHVSFVVIKAD+PWHY +DGVDLV+KGPSG+ L+D RD Sbjct: 27 GIRFVIDREECFSHHVQYEGDTVHVSFVVIKADSPWHYGDDGVDLVIKGPSGEHLHDFRD 86 Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452 KTSEK +F+ H +GLH+FCFTNKSPYHETIDFDVH GHF+Y +QHAKDEHFNPL++QISK Sbjct: 87 KTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHFNPLMDQISK 146 Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272 LEEALYN+QFEQHWLEAQTDRQA+VNEGM KRAIHKAMFES L+GAS LQVYLL+RLFE Sbjct: 147 LEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAIHKAMFESAALVGASVLQVYLLQRLFE 206 Query: 271 RKLGTSRV 248 RKLGTSRV Sbjct: 207 RKLGTSRV 214 >ref|XP_003618034.1| Transmembrane emp24 domain-containing protein [Medicago truncatula] gi|355519369|gb|AET00993.1| Transmembrane emp24 domain-containing protein [Medicago truncatula] Length = 213 Score = 339 bits (869), Expect = 7e-91 Identities = 154/188 (81%), Positives = 178/188 (94%) Frame = -2 Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632 GIRFVIDR+ECFSH+V+YEGDTVHVSFVVIKAD+PWHY ++GVDLVVKGP+G+Q+ D RD Sbjct: 26 GIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPAGEQIQDFRD 85 Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452 KTS+KF+F+ HK G+H+FCFTNKSPYHETIDFDVH GHF+Y +QHAKDEHFNPLLEQI+K Sbjct: 86 KTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQHAKDEHFNPLLEQIAK 145 Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272 LEEALYN+QFEQHWLEAQTDRQA+VN+GMS+RA+HKA+FES LIGAS LQVYLL+RLFE Sbjct: 146 LEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAALIGASALQVYLLRRLFE 205 Query: 271 RKLGTSRV 248 RKLGTSRV Sbjct: 206 RKLGTSRV 213 >ref|XP_003618033.1| Transmembrane emp24 domain-containing protein [Medicago truncatula] gi|355519368|gb|AET00992.1| Transmembrane emp24 domain-containing protein [Medicago truncatula] gi|388521389|gb|AFK48756.1| unknown [Medicago truncatula] Length = 214 Score = 339 bits (869), Expect = 7e-91 Identities = 154/188 (81%), Positives = 178/188 (94%) Frame = -2 Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632 GIRFVIDR+ECFSH+V+YEGDTVHVSFVVIKAD+PWHY ++GVDLVVKGP+G+Q+ D RD Sbjct: 27 GIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPAGEQIQDFRD 86 Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452 KTS+KF+F+ HK G+H+FCFTNKSPYHETIDFDVH GHF+Y +QHAKDEHFNPLLEQI+K Sbjct: 87 KTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQHAKDEHFNPLLEQIAK 146 Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272 LEEALYN+QFEQHWLEAQTDRQA+VN+GMS+RA+HKA+FES LIGAS LQVYLL+RLFE Sbjct: 147 LEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAALIGASALQVYLLRRLFE 206 Query: 271 RKLGTSRV 248 RKLGTSRV Sbjct: 207 RKLGTSRV 214 >ref|XP_003545588.1| PREDICTED: transmembrane emp24 domain-containing protein-like [Glycine max] Length = 212 Score = 337 bits (865), Expect = 2e-90 Identities = 154/188 (81%), Positives = 175/188 (93%) Frame = -2 Query: 811 GIRFVIDREECFSHEVQYEGDTVHVSFVVIKADAPWHYSEDGVDLVVKGPSGDQLYDSRD 632 GIRFVIDR+ECFSH+V+YEGDTVHVSFVVIKAD+PWHY ++GVDLVVKGPSG+Q+ D RD Sbjct: 25 GIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPSGEQIQDFRD 84 Query: 631 KTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHAKDEHFNPLLEQISK 452 KTSEKFDF+ HK G+H+FCFTNKSPYHET+DFDVH GHF+Y +QHAKDEHF PLLEQI K Sbjct: 85 KTSEKFDFVAHKSGVHKFCFTNKSPYHETVDFDVHVGHFSYFEQHAKDEHFTPLLEQIGK 144 Query: 451 LEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIGASCLQVYLLKRLFE 272 LEEALYN+QFEQHWLEAQTDRQA+VN+ MS+RA+HKA+FES LIGAS LQVYLL+RLFE Sbjct: 145 LEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAVHKAIFESAALIGASALQVYLLQRLFE 204 Query: 271 RKLGTSRV 248 RKLGTSRV Sbjct: 205 RKLGTSRV 212